RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 TIMM10P62072 90 aa15.7■□□□□ 0.1
TRIM40-206ENST00000376724 TTLL11Q8NHH1 800 aa15.7■□□□□ 0.1
TRIM40-206ENST00000376724 GREM2Q9H772 168 aa15.7■□□□□ 0.1
TRIM40-206ENST00000376724 NIP7Q9Y221 180 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRIM40-206ENST00000376724 ATRNO75882 1429 aa15.7■□□□□ 0.1
TRIM40-206ENST00000376724 ITGA6P23229 1130 aa15.69■□□□□ 0.1
TRIM40-206ENST00000376724 SNX21Q969T3 373 aa15.69■□□□□ 0.1
TRIM40-206ENST00000376724 SGSM2O43147 1006 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 PDE8AO60658 829 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 CIAO1O76071 339 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 CCNL1Q9UK58 526 aaPredicted RBP15.68■□□□□ 0.1
TRIM40-206ENST00000376724 NDUFB9Q9Y6M9 179 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 RREB1Q92766 1687 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 BTAF1O14981 1849 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
TRIM40-206ENST00000376724 ONECUT3O60422 494 aaPredicted RBP15.68■□□□□ 0.1
TRIM40-206ENST00000376724 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
TRIM40-206ENST00000376724 RABEP1Q15276 862 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 EDC3Q96F86 508 aaKnown RBP15.68■□□□□ 0.1
TRIM40-206ENST00000376724 FSD1Q9BTV5 496 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 UTP14AQ9BVJ6 771 aaKnown RBP15.68■□□□□ 0.1
TRIM40-206ENST00000376724 CEP126Q9P2H0 1117 aa15.68■□□□□ 0.1
TRIM40-206ENST00000376724 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
TRIM40-206ENST00000376724 ANKRD18BA2A2Z9 1011 aa15.67■□□□□ 0.1
TRIM40-206ENST00000376724 ATP5JP18859 108 aa15.67■□□□□ 0.1
TRIM40-206ENST00000376724 MCCP23508 829 aa15.67■□□□□ 0.1
TRIM40-206ENST00000376724 DNAJC2Q99543 621 aaKnown RBP15.67■□□□□ 0.1
TRIM40-206ENST00000376724 SH3TC1Q8TE82 1336 aa15.67■□□□□ 0.1
TRIM40-206ENST00000376724 RUFY2Q8WXA3 655 aa15.67■□□□□ 0.1
TRIM40-206ENST00000376724 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
TRIM40-206ENST00000376724 A0A1B0GUL7 405 aa15.66■□□□□ 0.1
TRIM40-206ENST00000376724 PARP10Q53GL7 1025 aa15.66■□□□□ 0.1
TRIM40-206ENST00000376724 LDHAL6AQ6ZMR3 332 aa15.66■□□□□ 0.1
TRIM40-206ENST00000376724 KIAA1211Q6ZU35 1233 aa15.66■□□□□ 0.1
TRIM40-206ENST00000376724 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
TRIM40-206ENST00000376724 PALD1Q9ULE6 856 aa15.66■□□□□ 0.1
TRIM40-206ENST00000376724 NHSQ6T4R5 1651 aa15.66■□□□□ 0.1
TRIM40-206ENST00000376724 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
TRIM40-206ENST00000376724 GNPATO15228 680 aa15.65■□□□□ 0.1
TRIM40-206ENST00000376724 CNNM1Q9NRU3 951 aa15.65■□□□□ 0.1
TRIM40-206ENST00000376724 BICDL1Q6ZP65 573 aa15.65■□□□□ 0.1
TRIM40-206ENST00000376724 FAM227BQ96M60 508 aa15.65■□□□□ 0.1
TRIM40-206ENST00000376724 K7ELQ4 463 aaPredicted RBP15.64■□□□□ 0.09
TRIM40-206ENST00000376724 NMIQ13287 307 aaPredicted RBP15.64■□□□□ 0.09
TRIM40-206ENST00000376724 METTL24Q5JXM2 366 aa15.64■□□□□ 0.09
TRIM40-206ENST00000376724 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
TRIM40-206ENST00000376724 FBXO3Q9UK99 471 aa15.64■□□□□ 0.09
TRIM40-206ENST00000376724 ZNF609O15014 1411 aa15.64■□□□□ 0.09
TRIM40-206ENST00000376724 ZNF831Q5JPB2 1677 aa15.64■□□□□ 0.09
TRIM40-206ENST00000376724 HIP1O00291 1037 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 NTSR2O95665 410 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
TRIM40-206ENST00000376724 LSG1Q9H089 658 aaKnown RBP15.63■□□□□ 0.09
TRIM40-206ENST00000376724 ANTXR1Q9H6X2 564 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 AKAP2Q9Y2D5 859 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 GORABQ5T7V8 394 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
TRIM40-206ENST00000376724 CLEC4GQ6UXB4 293 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 DDX46Q7L014 1031 aaKnown RBP15.63■□□□□ 0.09
TRIM40-206ENST00000376724 HAUS7Q99871 368 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 SRP68Q9UHB9 627 aaKnown RBP15.63■□□□□ 0.09
TRIM40-206ENST00000376724 RIPOR2Q9Y4F9 1068 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 MYH3P11055 1940 aa15.63■□□□□ 0.09
TRIM40-206ENST00000376724 ST18O60284 1047 aa15.62■□□□□ 0.09
TRIM40-206ENST00000376724 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
TRIM40-206ENST00000376724 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
TRIM40-206ENST00000376724 RAD50Q92878 1312 aa15.62■□□□□ 0.09
TRIM40-206ENST00000376724 A0A0D9SFI3 127 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 ADORA1P30542 326 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 HSPA4P34932 840 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 PTH1RQ03431 593 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 XAGE2Q96GT9 111 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 AK7Q96M32 723 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 BCL11BQ9C0K0 894 aaPredicted RBP15.61■□□□□ 0.09
TRIM40-206ENST00000376724 RTCBQ9Y3I0 505 aaKnown RBP15.61■□□□□ 0.09
TRIM40-206ENST00000376724 GOLIM4O00461 696 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 IFIT1P09914 478 aaKnown RBP15.61■□□□□ 0.09
TRIM40-206ENST00000376724 NEK4P51957 841 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 TBC1D9BQ66K14 1250 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 SEC31BQ9NQW1 1179 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 SBF2Q86WG5 1849 aa15.61■□□□□ 0.09
TRIM40-206ENST00000376724 ZPR1O75312 459 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 PHF14O94880 888 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 ANAPC15P60006 121 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 CCDC158Q5M9N0 1113 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 TTC39AQ5SRH9 613 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 KRT27Q7Z3Y8 459 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 AMIGO3Q86WK7 504 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 ANO8Q9HCE9 1232 aaPredicted RBP15.6■□□□□ 0.09
TRIM40-206ENST00000376724 PAG1Q9NWQ8 432 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 EPB41L2O43491 1005 aaKnown RBP15.6■□□□□ 0.09
TRIM40-206ENST00000376724 CHGBP05060 677 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 GTF2E1P29083 439 aaPredicted RBP15.6■□□□□ 0.09
TRIM40-206ENST00000376724 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 ERFEQ4G0M1 354 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 CCDC152Q4G0S7 254 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 BCL2L12Q9HB09 334 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
TRIM40-206ENST00000376724 BCORQ6W2J9 1755 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms