RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 ZBTB9Q96C00 473 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 PHKG2P15735 406 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 SSH3Q8TE77 659 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 ZKSCAN3Q9BRR0 538 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 ATP2B2Q01814 1243 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 NEURL1BA8MQ27 555 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 JAK2O60674 1132 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 SLC9C2Q5TAH2 1124 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 AATKQ6ZMQ8 1374 aa13.14□□□□□ -0.31
HDAC6-203ENST00000376619 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 IL25Q9H293 177 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-203ENST00000376619 NSFL1CQ9UNZ2 370 aaKnown RBP13.13□□□□□ -0.31
HDAC6-203ENST00000376619 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 FAM177A1Q8N128 213 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-203ENST00000376619 RBSNQ9H1K0 784 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-203ENST00000376619 NUP62CLQ9H1M0 184 aa13.13□□□□□ -0.31
HDAC6-203ENST00000376619 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-203ENST00000376619 CYP27B1O15528 508 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
HDAC6-203ENST00000376619 ZNF213O14771 459 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 ZSCAN22P10073 491 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-203ENST00000376619 C17orf53Q8N3J3 647 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-203ENST00000376619 PDILTQ8N807 584 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 A0A087WWV3 80 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 ANKRD18BA2A2Z9 1011 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 SMC2O95347 1197 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
HDAC6-203ENST00000376619 CCDC173Q0VFZ6 552 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 USP21Q9UK80 565 aa13.12□□□□□ -0.31
HDAC6-203ENST00000376619 ATP2B3Q16720 1220 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-203ENST00000376619 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 ARHGAP23Q9P227 1491 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 MYO5BQ9ULV0 1848 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
HDAC6-203ENST00000376619 PDE4CQ08493 712 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.11□□□□□ -0.312e-7■■■■□ 22.1
HDAC6-203ENST00000376619 NEXMIFQ5QGS0 1516 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-203ENST00000376619 NAPBQ9H115 298 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 DACT1Q9NYF0 836 aa13.11□□□□□ -0.31
HDAC6-203ENST00000376619 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDAC6-203ENST00000376619 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 DZIP3Q86Y13 1208 aaKnown RBP13.1□□□□□ -0.31
HDAC6-203ENST00000376619 ERBB3P21860 1342 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 ATP7BP35670 1465 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 MARCH6O60337 910 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 LARGE1O95461 756 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 SLIT1O75093 1534 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 IRS4O14654 1257 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-203ENST00000376619 NRDCO43847 1150 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 CCDC192P0DO97 292 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-203ENST00000376619 IGHMBP2P38935 993 aaKnown RBP13.1□□□□□ -0.31
HDAC6-203ENST00000376619 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-203ENST00000376619 KIF2CQ99661 725 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 SASH1O94885 1247 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
HDAC6-203ENST00000376619 PPP1R1BQ9UD71 204 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-203ENST00000376619 ADGRB1O14514 1584 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
HDAC6-203ENST00000376619 SLC27A2O14975 620 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 ME3Q16798 604 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 TPD52L1Q16890 204 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-203ENST00000376619 VSIG10Q8N0Z9 540 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 CLSTN1O94985 981 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 DDB1Q16531 1140 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 LMBRD1Q9NUN5 540 aa13.09□□□□□ -0.31
HDAC6-203ENST00000376619 ORC3Q9UBD5 711 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-203ENST00000376619 CCDC69A6NI79 296 aa13.08□□□□□ -0.32
HDAC6-203ENST00000376619 PRDM1O75626 825 aa13.08□□□□□ -0.32
HDAC6-203ENST00000376619 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.32
HDAC6-203ENST00000376619 IFIT3O14879 490 aaKnown RBP13.08□□□□□ -0.32
HDAC6-203ENST00000376619 ADORA1P30542 326 aa13.08□□□□□ -0.32
HDAC6-203ENST00000376619 HOMER1Q86YM7 354 aa13.08□□□□□ -0.32
HDAC6-203ENST00000376619 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
HDAC6-203ENST00000376619 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-203ENST00000376619 F13A1P00488 732 aa13.08□□□□□ -0.32
HDAC6-203ENST00000376619 RUFY3Q7L099 469 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms