RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CHGBP05060 677 aa15.35■□□□□ 0.05
CLCN6-206ENST00000376496 REC8O95072 547 aa15.34■□□□□ 0.05
CLCN6-206ENST00000376496 SRP68Q9UHB9 627 aaKnown RBP15.34■□□□□ 0.05
CLCN6-206ENST00000376496 ITGA6P23229 1130 aa15.34■□□□□ 0.05
CLCN6-206ENST00000376496 CTSWP56202 376 aa15.34■□□□□ 0.05
CLCN6-206ENST00000376496 IFIT5Q13325 482 aaKnown RBP15.34■□□□□ 0.05
CLCN6-206ENST00000376496 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
CLCN6-206ENST00000376496 GNPATO15228 680 aa15.33■□□□□ 0.05
CLCN6-206ENST00000376496 CSF1RP07333 972 aa15.33■□□□□ 0.05
CLCN6-206ENST00000376496 DNAJC2Q99543 621 aaKnown RBP15.33■□□□□ 0.05
CLCN6-206ENST00000376496 PALD1Q9ULE6 856 aa15.33■□□□□ 0.05
CLCN6-206ENST00000376496 ONECUT3O60422 494 aaPredicted RBP15.33■□□□□ 0.04
CLCN6-206ENST00000376496 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
CLCN6-206ENST00000376496 CDHR2Q9BYE9 1310 aa15.32■□□□□ 0.04
CLCN6-206ENST00000376496 PHF14O94880 888 aa15.32■□□□□ 0.04
CLCN6-206ENST00000376496 IL15P40933 162 aaPredicted RBP15.32■□□□□ 0.04
CLCN6-206ENST00000376496 CCDC24Q8N4L8 307 aa15.32■□□□□ 0.04
CLCN6-206ENST00000376496 FAM227BQ96M60 508 aa15.32■□□□□ 0.04
CLCN6-206ENST00000376496 PLA2G12BQ9BX93 195 aa15.32■□□□□ 0.04
CLCN6-206ENST00000376496 ADORA1P30542 326 aa15.32■□□□□ 0.04
CLCN6-206ENST00000376496 HSCBQ8IWL3 235 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
CLCN6-206ENST00000376496 SEC31BQ9NQW1 1179 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 RREB1Q92766 1687 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 PDE8AO60658 829 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 USPL1Q5W0Q7 1092 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 FSD1Q9BTV5 496 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 SH3TC1Q8TE82 1336 aa15.31■□□□□ 0.04
CLCN6-206ENST00000376496 SLFNL1Q499Z3 407 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 LDHAL6AQ6ZMR3 332 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 HELBQ8NG08 1087 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-206ENST00000376496 EVI5LQ96CN4 794 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 LRRC4BQ9NT99 713 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 CEP126Q9P2H0 1117 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 SGSM2O43147 1006 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 TRIM37O94972 964 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
CLCN6-206ENST00000376496 BCL2L12Q9HB09 334 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 SBF2Q86WG5 1849 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 SNAP23O00161 211 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 TBC1D9BQ66K14 1250 aa15.3■□□□□ 0.04
CLCN6-206ENST00000376496 ANKRD18BA2A2Z9 1011 aa15.29■□□□□ 0.04
CLCN6-206ENST00000376496 NTSR2O95665 410 aa15.29■□□□□ 0.04
CLCN6-206ENST00000376496 NMIQ13287 307 aaPredicted RBP15.29■□□□□ 0.04
CLCN6-206ENST00000376496 C3orf67Q6ZVT6 689 aa15.29■□□□□ 0.04
CLCN6-206ENST00000376496 CNNM1Q9NRU3 951 aa15.29■□□□□ 0.04
CLCN6-206ENST00000376496 ATP5JP18859 108 aa15.29■□□□□ 0.04
CLCN6-206ENST00000376496 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
CLCN6-206ENST00000376496 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 CIAO1O76071 339 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 ERFEQ4G0M1 354 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 METTL24Q5JXM2 366 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 BRWD3Q6RI45 1802 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 MYH3P11055 1940 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 A0A0D9SFI3 127 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 PTH1RQ03431 593 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 KRT27Q7Z3Y8 459 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
CLCN6-206ENST00000376496 ZNF609O15014 1411 aa15.28■□□□□ 0.04
CLCN6-206ENST00000376496 RPS6KA4O75676 772 aa15.27■□□□□ 0.04
CLCN6-206ENST00000376496 RIPOR2Q9Y4F9 1068 aa15.27■□□□□ 0.04
CLCN6-206ENST00000376496 FAM196AQ6ZSG2 479 aa15.27■□□□□ 0.03
CLCN6-206ENST00000376496 ARHGEF1Q92888 912 aaKnown RBP15.27■□□□□ 0.03
CLCN6-206ENST00000376496 LSG1Q9H089 658 aaKnown RBP15.27■□□□□ 0.03
CLCN6-206ENST00000376496 RIC1Q4ADV7 1423 aa15.27■□□□□ 0.03
CLCN6-206ENST00000376496 GOLIM4O00461 696 aa15.27■□□□□ 0.03
CLCN6-206ENST00000376496 PI16Q6UXB8 463 aa15.27■□□□□ 0.03
CLCN6-206ENST00000376496 NOL8Q76FK4 1167 aaKnown RBP15.27■□□□□ 0.03
CLCN6-206ENST00000376496 ZNF652Q9Y2D9 606 aa15.27■□□□□ 0.03
CLCN6-206ENST00000376496 PARP10Q53GL7 1025 aa15.26■□□□□ 0.03
CLCN6-206ENST00000376496 XAGE2Q96GT9 111 aa15.26■□□□□ 0.03
CLCN6-206ENST00000376496 SEC62Q99442 399 aaKnown RBP15.26■□□□□ 0.03
CLCN6-206ENST00000376496 UPF3BQ9BZI7 483 aaKnown RBP15.26■□□□□ 0.03
CLCN6-206ENST00000376496 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
CLCN6-206ENST00000376496 ANTXR1Q9H6X2 564 aa15.26■□□□□ 0.03
CLCN6-206ENST00000376496 RTCBQ9Y3I0 505 aaKnown RBP15.26■□□□□ 0.03
CLCN6-206ENST00000376496 SCARF1Q14162 830 aa15.26■□□□□ 0.03
CLCN6-206ENST00000376496 RABEP1Q15276 862 aa15.26■□□□□ 0.03
CLCN6-206ENST00000376496 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
CLCN6-206ENST00000376496 SNX21Q969T3 373 aa15.26■□□□□ 0.03
CLCN6-206ENST00000376496 COL4A1P02462 1669 aa15.26■□□□□ 0.03
CLCN6-206ENST00000376496 TAF5LO75529 589 aa15.25■□□□□ 0.03
CLCN6-206ENST00000376496 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
CLCN6-206ENST00000376496 KIAA1211Q6ZU35 1233 aa15.25■□□□□ 0.03
CLCN6-206ENST00000376496 ZNF589Q86UQ0 364 aaPredicted RBP15.25■□□□□ 0.03
CLCN6-206ENST00000376496 HAUS7Q99871 368 aa15.25■□□□□ 0.03
CLCN6-206ENST00000376496 ZPR1O75312 459 aa15.24■□□□□ 0.03
CLCN6-206ENST00000376496 GTF2E1P29083 439 aaPredicted RBP15.24■□□□□ 0.03
CLCN6-206ENST00000376496 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLCN6-206ENST00000376496 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
CLCN6-206ENST00000376496 RASEFQ8IZ41 740 aa15.24■□□□□ 0.03
CLCN6-206ENST00000376496 GPR108Q9NPR9 543 aa15.24■□□□□ 0.03
CLCN6-206ENST00000376496 NARFQ9UHQ1 456 aa15.24■□□□□ 0.03
CLCN6-206ENST00000376496 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
CLCN6-206ENST00000376496 BCORQ6W2J9 1755 aa15.24■□□□□ 0.03
CLCN6-206ENST00000376496 IFIT1P09914 478 aaKnown RBP15.24■□□□□ 0.03
CLCN6-206ENST00000376496 NEK4P51957 841 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms