RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 ARHGAP29Q52LW3 1261 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
MDC1-201ENST00000376406 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
MDC1-201ENST00000376406 TSHZ3Q63HK5 1081 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 CHRNA2Q15822 529 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 FSIP1Q8NA03 581 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 CCDC150Q8NCX0 1101 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 UTP14AQ9BVJ6 771 aaKnown RBP12.68□□□□□ -0.38
MDC1-201ENST00000376406 POLKQ9UBT6 870 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 PDCL3Q9H2J4 239 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 EFCAB6Q5THR3 1501 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 ALDH1L1O75891 902 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 ADCY5O95622 1261 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 CCT2P78371 535 aaKnown RBP12.68□□□□□ -0.38
MDC1-201ENST00000376406 FLAD1Q8NFF5 587 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 TMTC2Q8N394 836 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 CNNM3Q8NE01 707 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 MATR3P43243 847 aaKnown RBP eCLIP12.68□□□□□ -0.38
MDC1-201ENST00000376406 NCOA7Q8NI08 942 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 UBXN4Q92575 508 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 USP25Q9UHP3 1055 aa12.68□□□□□ -0.38
MDC1-201ENST00000376406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.68□□□□□ -0.381e-8■■■□□ 16
MDC1-201ENST00000376406 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
MDC1-201ENST00000376406 GCP02774 474 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 CCDC96Q2M329 555 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 TFCP2L1Q9NZI6 479 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 TNNI2P48788 182 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 CARD14Q9BXL6 1004 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 KIF5CO60282 957 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 PER1O15534 1290 aaPredicted RBP12.67□□□□□ -0.38
MDC1-201ENST00000376406 TSG101Q99816 390 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 TTC41PQ6P2S7 1318 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 YEATS2Q9ULM3 1422 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 NLRP1Q9C000 1473 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 GPTP24298 496 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
MDC1-201ENST00000376406 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
MDC1-201ENST00000376406 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
MDC1-201ENST00000376406 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 MCM3P25205 808 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 FKBP15Q5T1M5 1219 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
MDC1-201ENST00000376406 FBLN1P23142 703 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 UBE3BQ7Z3V4 1068 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 ZC3H12CQ9C0D7 883 aaKnown RBP12.66□□□□□ -0.38
MDC1-201ENST00000376406 ZBTB40Q9NUA8 1239 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 SYNMO15061 1565 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 DCTPP1Q9H773 170 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 SSBP05455 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
MDC1-201ENST00000376406 GNAQP50148 359 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 SKIDA1Q1XH10 827 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 KANK3Q6NY19 840 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 VAMP4O75379 141 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 CEP85Q6P2H3 762 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
MDC1-201ENST00000376406 GNAT2P19087 354 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 SPA17Q15506 151 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 CNNM2Q9H8M5 875 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 RANBP6O60518 1105 aaKnown RBP12.65□□□□□ -0.38
MDC1-201ENST00000376406 TMEM87AQ8NBN3 555 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 MAGI3Q5TCQ9 1506 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 METAP2P50579 478 aaKnown RBP eCLIP12.65□□□□□ -0.384e-6■□□□□ 8.6
MDC1-201ENST00000376406 PARP10Q53GL7 1025 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 TMCO3Q6UWJ1 677 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 GRM8O00222 908 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 SIRT1Q96EB6 747 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 KSR2Q6VAB6 950 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 SBNO1A3KN83 1393 aa12.65□□□□□ -0.38
MDC1-201ENST00000376406 LRRC27Q9C0I9 530 aa12.65□□□□□ -0.39
MDC1-201ENST00000376406 NIP7Q9Y221 180 aaKnown RBP eCLIP12.65□□□□□ -0.39
MDC1-201ENST00000376406 TET3O43151 1660 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 USP16Q9Y5T5 823 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 SMC5Q8IY18 1101 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
MDC1-201ENST00000376406 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
MDC1-201ENST00000376406 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 JAKMIP3Q5VZ66 844 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 RLBP1P12271 317 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 TAF4BQ92750 862 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 ATP5J2-PTCD1G3V325 749 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 TNNT1P13805 278 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
MDC1-201ENST00000376406 MCMDC2Q4G0Z9 681 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 CCDC191Q8NCU4 936 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 KRT23Q9C075 422 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 KIAA0754O94854 1291 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 CETN2P41208 172 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 NLRP5P59047 1200 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 BTG4Q9NY30 223 aa12.64□□□□□ -0.39
MDC1-201ENST00000376406 MTHFSDQ2M296 383 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms