RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
PDPN-202ENST00000376057 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
PDPN-202ENST00000376057 NUTM1Q86Y26 1132 aa13.6□□□□□ -0.23
PDPN-202ENST00000376057 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
PDPN-202ENST00000376057 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
PDPN-202ENST00000376057 RFX7Q2KHR2 1363 aa13.6□□□□□ -0.23
PDPN-202ENST00000376057 AACSQ86V21 672 aa13.6□□□□□ -0.23
PDPN-202ENST00000376057 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
PDPN-202ENST00000376057 ARAP2Q8WZ64 1704 aa13.6□□□□□ -0.23
PDPN-202ENST00000376057 TNS1Q9HBL0 1735 aaKnown RBP13.6□□□□□ -0.23
PDPN-202ENST00000376057 RXRBP28702 533 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
PDPN-202ENST00000376057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDPN-202ENST00000376057 C22orf23Q9BZE7 217 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 CASZ1Q86V15 1759 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 ZNF609O15014 1411 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 ATP5JP18859 108 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 GPTP24298 496 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 TFCP2Q12800 502 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
PDPN-202ENST00000376057 ANKRD18BA2A2Z9 1011 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 NIP7Q9Y221 180 aaKnown RBP eCLIP13.58□□□□□ -0.24
PDPN-202ENST00000376057 AKAP2Q9Y2D5 859 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 REC8O95072 547 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 CHMLP26374 656 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 SSFA2P28290 1259 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 EVI5LQ96CN4 794 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 ARXQ96QS3 562 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 RIPOR2Q9Y4F9 1068 aa13.58□□□□□ -0.24
PDPN-202ENST00000376057 SIL1Q9H173 461 aa13.57□□□□□ -0.24
PDPN-202ENST00000376057 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
PDPN-202ENST00000376057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.57□□□□□ -0.24
PDPN-202ENST00000376057 HIP1O00291 1037 aa13.57□□□□□ -0.24
PDPN-202ENST00000376057 GNPATO15228 680 aa13.57□□□□□ -0.24
PDPN-202ENST00000376057 SF3B3Q15393 1217 aaKnown RBP13.57□□□□□ -0.24
PDPN-202ENST00000376057 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
PDPN-202ENST00000376057 ZPR1O75312 459 aa13.56□□□□□ -0.24
PDPN-202ENST00000376057 ITGA6P23229 1130 aa13.56□□□□□ -0.24
PDPN-202ENST00000376057 TRAPPC3LQ5T215 181 aa13.56□□□□□ -0.24
PDPN-202ENST00000376057 ARHGEF1Q92888 912 aaKnown RBP13.56□□□□□ -0.24
PDPN-202ENST00000376057 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
PDPN-202ENST00000376057 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
PDPN-202ENST00000376057 USP26Q9BXU7 913 aa13.56□□□□□ -0.24
PDPN-202ENST00000376057 CCDC152Q4G0S7 254 aa13.55□□□□□ -0.24
PDPN-202ENST00000376057 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
PDPN-202ENST00000376057 GREM2Q9H772 168 aa13.55□□□□□ -0.24
PDPN-202ENST00000376057 DBNLQ9UJU6 430 aaKnown RBP13.55□□□□□ -0.24
PDPN-202ENST00000376057 CHMP3Q9Y3E7 222 aa13.55□□□□□ -0.24
PDPN-202ENST00000376057 MROH5Q6ZUA9 1318 aa13.55□□□□□ -0.24
PDPN-202ENST00000376057 CEP126Q9P2H0 1117 aa13.55□□□□□ -0.24
PDPN-202ENST00000376057 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
PDPN-202ENST00000376057 QSER1Q2KHR3 1735 aa13.55□□□□□ -0.24
PDPN-202ENST00000376057 ZBTB22O15209 634 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 LRRC24Q50LG9 513 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 SYNE4Q8N205 404 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 VGLL2Q8N8G2 317 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
PDPN-202ENST00000376057 USPL1Q5W0Q7 1092 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 HAUS7Q99871 368 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 A0A1B0GUL6 1792 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 TRIM37O94972 964 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 TSHZ3Q63HK5 1081 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
PDPN-202ENST00000376057 RAD50Q92878 1312 aa13.53□□□□□ -0.24
PDPN-202ENST00000376057 SETDB2Q96T68 719 aa13.53□□□□□ -0.24
PDPN-202ENST00000376057 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
PDPN-202ENST00000376057 SNX21Q969T3 373 aa13.53□□□□□ -0.24
PDPN-202ENST00000376057 ZNF594Q96JF6 807 aaPredicted RBP13.53□□□□□ -0.24
PDPN-202ENST00000376057 TLR7Q9NYK1 1049 aaKnown RBP13.53□□□□□ -0.24
PDPN-202ENST00000376057 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
PDPN-202ENST00000376057 RFC4P35249 363 aa13.52□□□□□ -0.24
PDPN-202ENST00000376057 KCNQ4P56696 695 aa13.52□□□□□ -0.24
PDPN-202ENST00000376057 TXNRD1Q16881 649 aa13.52□□□□□ -0.24
PDPN-202ENST00000376057 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.24
PDPN-202ENST00000376057 PROM2Q8N271 834 aa13.52□□□□□ -0.24
PDPN-202ENST00000376057 RUFY2Q8WXA3 655 aa13.52□□□□□ -0.24
PDPN-202ENST00000376057 RILPL2Q969X0 211 aa13.52□□□□□ -0.24
PDPN-202ENST00000376057 PUS3Q9BZE2 481 aaKnown RBP13.52□□□□□ -0.24
PDPN-202ENST00000376057 TPTE2Q6XPS3 522 aa13.52□□□□□ -0.25
PDPN-202ENST00000376057 LDHAL6AQ6ZMR3 332 aa13.52□□□□□ -0.25
PDPN-202ENST00000376057 KIF2CQ99661 725 aa13.52□□□□□ -0.25
PDPN-202ENST00000376057 NRXN2Q9P2S2 1712 aa13.52□□□□□ -0.25
PDPN-202ENST00000376057 SGSM2O43147 1006 aa13.51□□□□□ -0.25
PDPN-202ENST00000376057 ANAPC15P60006 121 aa13.51□□□□□ -0.25
PDPN-202ENST00000376057 BECN1Q14457 450 aa13.51□□□□□ -0.25
PDPN-202ENST00000376057 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
PDPN-202ENST00000376057 MSH5O43196 834 aa13.51□□□□□ -0.25
PDPN-202ENST00000376057 FLAD1Q8NFF5 587 aa13.51□□□□□ -0.25
PDPN-202ENST00000376057 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
PDPN-202ENST00000376057 DBNDD2Q9BQY9 259 aa13.51□□□□□ -0.25
PDPN-202ENST00000376057 PDE8BO95263 885 aa13.5□□□□□ -0.25
PDPN-202ENST00000376057 FGFR2P21802 821 aa13.5□□□□□ -0.25
PDPN-202ENST00000376057 ERFEQ4G0M1 354 aa13.5□□□□□ -0.25
PDPN-202ENST00000376057 AMIGO3Q86WK7 504 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms