RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
MSH5-202ENST00000375740 NCLP19338 710 aaKnown RBP16.75■□□□□ 0.27
MSH5-202ENST00000375740 RUFY3Q7L099 469 aa16.75■□□□□ 0.27
MSH5-202ENST00000375740 JAKMIP1Q96N16 626 aaKnown RBP16.75■□□□□ 0.27
MSH5-202ENST00000375740 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
MSH5-202ENST00000375740 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
MSH5-202ENST00000375740 LIMCH1Q9UPQ0 1083 aa16.75■□□□□ 0.27
MSH5-202ENST00000375740 TERF1P54274 439 aa16.75■□□□□ 0.27
MSH5-202ENST00000375740 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
MSH5-202ENST00000375740 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
MSH5-202ENST00000375740 NOL7Q9UMY1 257 aaKnown RBP16.74■□□□□ 0.27
MSH5-202ENST00000375740 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
MSH5-202ENST00000375740 KCNJ4P48050 445 aa16.74■□□□□ 0.27
MSH5-202ENST00000375740 CREB3L3Q68CJ9 461 aa16.74■□□□□ 0.27
MSH5-202ENST00000375740 ATG9AQ7Z3C6 839 aa16.74■□□□□ 0.27
MSH5-202ENST00000375740 DNAJC10Q8IXB1 793 aa16.74■□□□□ 0.27
MSH5-202ENST00000375740 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
MSH5-202ENST00000375740 NDUFB9Q9Y6M9 179 aa16.74■□□□□ 0.27
MSH5-202ENST00000375740 TM6SF1Q9BZW5 370 aa16.73■□□□□ 0.27
MSH5-202ENST00000375740 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
MSH5-202ENST00000375740 TJP1Q07157 1748 aa16.73■□□□□ 0.27
MSH5-202ENST00000375740 ZKSCAN1P17029 563 aaPredicted RBP16.73■□□□□ 0.27
MSH5-202ENST00000375740 ATG3Q9NT62 314 aa16.73■□□□□ 0.27
MSH5-202ENST00000375740 ISCA1Q9BUE6 129 aa16.73■□□□□ 0.27
MSH5-202ENST00000375740 ZNF500O60304 480 aaPredicted RBP16.72■□□□□ 0.27
MSH5-202ENST00000375740 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
MSH5-202ENST00000375740 TCIRG1Q13488 830 aa16.72■□□□□ 0.27
MSH5-202ENST00000375740 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
MSH5-202ENST00000375740 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
MSH5-202ENST00000375740 CCDC9Q9Y3X0 531 aaKnown RBP16.72■□□□□ 0.27
MSH5-202ENST00000375740 CYP46A1Q9Y6A2 500 aa16.72■□□□□ 0.27
MSH5-202ENST00000375740 SLC27A2O14975 620 aa16.72■□□□□ 0.27
MSH5-202ENST00000375740 ZSCAN23Q3MJ62 389 aa16.72■□□□□ 0.27
MSH5-202ENST00000375740 ZNF589Q86UQ0 364 aaPredicted RBP16.72■□□□□ 0.27
MSH5-202ENST00000375740 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
MSH5-202ENST00000375740 DNAJC2Q99543 621 aaKnown RBP16.72■□□□□ 0.27
MSH5-202ENST00000375740 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
MSH5-202ENST00000375740 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
MSH5-202ENST00000375740 HAUS7Q99871 368 aa16.71■□□□□ 0.27
MSH5-202ENST00000375740 TIMM10P62072 90 aa16.71■□□□□ 0.26
MSH5-202ENST00000375740 LRRC24Q50LG9 513 aa16.71■□□□□ 0.26
MSH5-202ENST00000375740 MAP7D2Q96T17 732 aa16.71■□□□□ 0.26
MSH5-202ENST00000375740 LARGE1O95461 756 aa16.7■□□□□ 0.26
MSH5-202ENST00000375740 IL15P40933 162 aaPredicted RBP16.7■□□□□ 0.26
MSH5-202ENST00000375740 GPT2Q8TD30 523 aa16.7■□□□□ 0.26
MSH5-202ENST00000375740 PDLIM2Q96JY6 352 aa16.7■□□□□ 0.26
MSH5-202ENST00000375740 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
MSH5-202ENST00000375740 ZNF445P59923 1031 aa16.7■□□□□ 0.26
MSH5-202ENST00000375740 ITGB4P16144 1822 aa16.69■□□□□ 0.26
MSH5-202ENST00000375740 EYA2O00167 538 aa16.69■□□□□ 0.26
MSH5-202ENST00000375740 TAF5LO75529 589 aa16.69■□□□□ 0.26
MSH5-202ENST00000375740 STARD3NLO95772 234 aa16.69■□□□□ 0.26
MSH5-202ENST00000375740 CHGBP05060 677 aa16.69■□□□□ 0.26
MSH5-202ENST00000375740 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.69■□□□□ 0.26
MSH5-202ENST00000375740 KIF6Q6ZMV9 814 aa16.69■□□□□ 0.26
MSH5-202ENST00000375740 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
MSH5-202ENST00000375740 GPR108Q9NPR9 543 aa16.69■□□□□ 0.26
MSH5-202ENST00000375740 WDR33Q9C0J8 1336 aaKnown RBP16.69■□□□□ 0.26
MSH5-202ENST00000375740 RNF20Q5VTR2 975 aa16.68■□□□□ 0.26
MSH5-202ENST00000375740 PUS3Q9BZE2 481 aaKnown RBP16.68■□□□□ 0.26
MSH5-202ENST00000375740 TRIM28Q13263 835 aaKnown RBP16.68■□□□□ 0.26
MSH5-202ENST00000375740 COL9A3Q14050 684 aaPredicted RBP16.68■□□□□ 0.26
MSH5-202ENST00000375740 SMAP1Q8IYB5 467 aaPredicted RBP16.68■□□□□ 0.26
MSH5-202ENST00000375740 ZSCAN31Q96LW9 406 aaPredicted RBP16.68■□□□□ 0.26
MSH5-202ENST00000375740 TAF6LQ9Y6J9 622 aa16.68■□□□□ 0.26
MSH5-202ENST00000375740 RPAP1Q9BWH6 1393 aaPredicted RBP16.68■□□□□ 0.26
MSH5-202ENST00000375740 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
MSH5-202ENST00000375740 PSMA5P28066 241 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 FOXD4L6Q3SYB3 417 aaPredicted RBP16.67■□□□□ 0.26
MSH5-202ENST00000375740 FOXD4L3Q6VB84 417 aaPredicted RBP16.67■□□□□ 0.26
MSH5-202ENST00000375740 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 SMC3Q9UQE7 1217 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 EXOC5O00471 708 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 HS1BP3Q53T59 392 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 TSC1Q92574 1164 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 FAM89AQ96GI7 184 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 SEC62Q99442 399 aaKnown RBP16.67■□□□□ 0.26
MSH5-202ENST00000375740 ZKSCAN5Q9Y2L8 839 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 JCADQ9P266 1359 aa16.67■□□□□ 0.26
MSH5-202ENST00000375740 CIAO1O76071 339 aa16.66■□□□□ 0.26
MSH5-202ENST00000375740 CCDC129Q6ZRS4 1044 aa16.66■□□□□ 0.26
MSH5-202ENST00000375740 SLC4A9Q96Q91 983 aa16.66■□□□□ 0.26
MSH5-202ENST00000375740 NSFL1CQ9UNZ2 370 aaKnown RBP16.66■□□□□ 0.26
MSH5-202ENST00000375740 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
MSH5-202ENST00000375740 ME3Q16798 604 aa16.66■□□□□ 0.26
MSH5-202ENST00000375740 KBTBD3Q8NAB2 608 aa16.66■□□□□ 0.26
MSH5-202ENST00000375740 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
MSH5-202ENST00000375740 ZNF609O15014 1411 aa16.66■□□□□ 0.26
MSH5-202ENST00000375740 DTNBO60941 627 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 PCCAP05165 728 aaPredicted RBP16.65■□□□□ 0.26
MSH5-202ENST00000375740 SYT1P21579 422 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 CCDC57Q2TAC2 916 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
MSH5-202ENST00000375740 RFX7Q2KHR2 1363 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 BCL9O00512 1426 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 GOLIM4O00461 696 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms