RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 RNF181Q9P0P0 153 aa20.32■□□□□ 0.84
C11orf88-202ENST00000375618 PTPRCP08575 1304 aa20.31■□□□□ 0.84
C11orf88-202ENST00000375618 LTBP3Q9NS15 1303 aa20.31■□□□□ 0.84
C11orf88-202ENST00000375618 BRPF1P55201 1214 aaPredicted RBP20.31■□□□□ 0.84
C11orf88-202ENST00000375618 DDX46Q7L014 1031 aaKnown RBP20.31■□□□□ 0.84
C11orf88-202ENST00000375618 NOB1Q9ULX3 412 aaKnown RBP20.31■□□□□ 0.84
C11orf88-202ENST00000375618 TAOK3Q9H2K8 898 aa20.3■□□□□ 0.84
C11orf88-202ENST00000375618 CCDC88AQ3V6T2 1871 aa20.29■□□□□ 0.84
C11orf88-202ENST00000375618 BCAR3O75815 825 aa20.29■□□□□ 0.84
C11orf88-202ENST00000375618 LMNB1P20700 586 aa20.29■□□□□ 0.84
C11orf88-202ENST00000375618 CTSWP56202 376 aa20.29■□□□□ 0.84
C11orf88-202ENST00000375618 SOGA3Q5TF21 947 aa20.29■□□□□ 0.84
C11orf88-202ENST00000375618 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
C11orf88-202ENST00000375618 ATP6V0A2Q9Y487 856 aa20.29■□□□□ 0.84
C11orf88-202ENST00000375618 ALDH1L1O75891 902 aa20.28■□□□□ 0.84
C11orf88-202ENST00000375618 BBOX1O75936 387 aa20.28■□□□□ 0.84
C11orf88-202ENST00000375618 FKBP4Q02790 459 aaKnown RBP eCLIP20.28■□□□□ 0.84
C11orf88-202ENST00000375618 EPHA10Q5JZY3 1008 aa20.28■□□□□ 0.84
C11orf88-202ENST00000375618 PLA2G12BQ9BX93 195 aa20.28■□□□□ 0.84
C11orf88-202ENST00000375618 SRCIN1Q9C0H9 1055 aa20.28■□□□□ 0.84
C11orf88-202ENST00000375618 ZNF277Q9NRM2 450 aaPredicted RBP20.28■□□□□ 0.84
C11orf88-202ENST00000375618 TNNQ9UQP3 1299 aa20.28■□□□□ 0.84
C11orf88-202ENST00000375618 LRRC37AA6NMS7 1700 aa20.27■□□□□ 0.84
C11orf88-202ENST00000375618 COL4A5P29400 1685 aa20.27■□□□□ 0.84
C11orf88-202ENST00000375618 TIAM2Q8IVF5 1701 aa20.27■□□□□ 0.83
C11orf88-202ENST00000375618 GRM8O00222 908 aa20.26■□□□□ 0.83
C11orf88-202ENST00000375618 FOXO4P98177 505 aa20.26■□□□□ 0.83
C11orf88-202ENST00000375618 SP8Q8IXZ3 490 aa20.26■□□□□ 0.83
C11orf88-202ENST00000375618 RTKN2Q8IZC4 609 aa20.26■□□□□ 0.83
C11orf88-202ENST00000375618 ZNF526Q8TF50 670 aaPredicted RBP20.26■□□□□ 0.83
C11orf88-202ENST00000375618 GREM2Q9H772 168 aa20.26■□□□□ 0.83
C11orf88-202ENST00000375618 MYH3P11055 1940 aa20.25■□□□□ 0.83
C11orf88-202ENST00000375618 DUOX1Q9NRD9 1551 aa20.25■□□□□ 0.83
C11orf88-202ENST00000375618 CCDC152Q4G0S7 254 aa20.25■□□□□ 0.83
C11orf88-202ENST00000375618 CC2D2BQ6DHV5 1058 aa20.25■□□□□ 0.83
C11orf88-202ENST00000375618 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
C11orf88-202ENST00000375618 CSF1RP07333 972 aa20.24■□□□□ 0.83
C11orf88-202ENST00000375618 NBPF7P0C2Y1 421 aaPredicted RBP20.24■□□□□ 0.83
C11orf88-202ENST00000375618 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
C11orf88-202ENST00000375618 RPS8P62241 208 aaKnown RBP20.24■□□□□ 0.83
C11orf88-202ENST00000375618 PSMD1Q99460 953 aa20.24■□□□□ 0.83
C11orf88-202ENST00000375618 UTYO14607 1347 aa20.24■□□□□ 0.83
C11orf88-202ENST00000375618 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
C11orf88-202ENST00000375618 RTL9Q8NET4 1388 aa20.23■□□□□ 0.83
C11orf88-202ENST00000375618 FAM161AQ3B820 660 aa20.23■□□□□ 0.83
C11orf88-202ENST00000375618 SUCLG2Q96I99 432 aa20.23■□□□□ 0.83
C11orf88-202ENST00000375618 LTBP1Q14766 1721 aa20.22■□□□□ 0.83
C11orf88-202ENST00000375618 USP44Q9H0E7 712 aa20.22■□□□□ 0.83
C11orf88-202ENST00000375618 C9orf78Q9NZ63 289 aaPredicted RBP20.22■□□□□ 0.83
C11orf88-202ENST00000375618 KIF16BQ96L93 1317 aa20.22■□□□□ 0.83
C11orf88-202ENST00000375618 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
C11orf88-202ENST00000375618 GPSM2P81274 684 aa20.21■□□□□ 0.83
C11orf88-202ENST00000375618 RTFDC1Q9BY42 306 aaPredicted RBP20.21■□□□□ 0.83
C11orf88-202ENST00000375618 API5Q9BZZ5 524 aaKnown RBP20.21■□□□□ 0.83
C11orf88-202ENST00000375618 TRIM27P14373 513 aa20.2■□□□□ 0.82
C11orf88-202ENST00000375618 TMC4Q7Z404 712 aa20.2■□□□□ 0.82
C11orf88-202ENST00000375618 MPNDQ8N594 471 aa20.2■□□□□ 0.82
C11orf88-202ENST00000375618 ARHGAP45Q92619 1136 aa20.2■□□□□ 0.82
C11orf88-202ENST00000375618 SPEF2Q9C093 1822 aa20.2■□□□□ 0.82
C11orf88-202ENST00000375618 ITGA6P23229 1130 aa20.19■□□□□ 0.82
C11orf88-202ENST00000375618 LMBR1LQ6UX01 489 aa20.19■□□□□ 0.82
C11orf88-202ENST00000375618 DPP8Q6V1X1 898 aaPredicted RBP20.19■□□□□ 0.82
C11orf88-202ENST00000375618 ANKRD18AQ8IVF6 992 aa20.19■□□□□ 0.82
C11orf88-202ENST00000375618 FRAT1Q92837 279 aaPredicted RBP20.19■□□□□ 0.82
C11orf88-202ENST00000375618 GRIPAP1Q4V328 841 aa20.18■□□□□ 0.82
C11orf88-202ENST00000375618 GPR101Q96P66 508 aaPredicted RBP20.18■□□□□ 0.82
C11orf88-202ENST00000375618 NMRK2Q9NPI5 230 aa20.18■□□□□ 0.82
C11orf88-202ENST00000375618 ZC3H4Q9UPT8 1303 aaKnown RBP20.18■□□□□ 0.82
C11orf88-202ENST00000375618 WTIPA6NIX2 430 aaPredicted RBP20.17■□□□□ 0.82
C11orf88-202ENST00000375618 CCT4P50991 539 aaKnown RBP20.17■□□□□ 0.82
C11orf88-202ENST00000375618 AOC3Q16853 763 aa20.17■□□□□ 0.82
C11orf88-202ENST00000375618 ATF7IPQ6VMQ6 1270 aa20.17■□□□□ 0.82
C11orf88-202ENST00000375618 ANKRD44Q8N8A2 993 aa20.17■□□□□ 0.82
C11orf88-202ENST00000375618 GPBP1L1Q9HC44 474 aaPredicted RBP20.17■□□□□ 0.82
C11orf88-202ENST00000375618 POLLQ9UGP5 575 aa20.17■□□□□ 0.82
C11orf88-202ENST00000375618 NSFL1CQ9UNZ2 370 aaKnown RBP20.17■□□□□ 0.82
C11orf88-202ENST00000375618 ZNF541Q9H0D2 1346 aa20.17■□□□□ 0.82
C11orf88-202ENST00000375618 CDC5LQ99459 802 aaKnown RBP20.16■□□□□ 0.82
C11orf88-202ENST00000375618 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
C11orf88-202ENST00000375618 GLTPD2A6NH11 291 aa20.15■□□□□ 0.82
C11orf88-202ENST00000375618 KIF3CO14782 793 aa20.15■□□□□ 0.82
C11orf88-202ENST00000375618 PPIP5K2O43314 1243 aa20.15■□□□□ 0.82
C11orf88-202ENST00000375618 INTS3Q68E01 1043 aaKnown RBP20.15■□□□□ 0.82
C11orf88-202ENST00000375618 CLUAP1Q96AJ1 413 aa20.15■□□□□ 0.82
C11orf88-202ENST00000375618 TMX4Q9H1E5 349 aaPredicted RBP20.15■□□□□ 0.82
C11orf88-202ENST00000375618 BSDC1Q9NW68 430 aaPredicted RBP20.15■□□□□ 0.82
C11orf88-202ENST00000375618 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
C11orf88-202ENST00000375618 CHMP3Q9Y3E7 222 aa20.15■□□□□ 0.82
C11orf88-202ENST00000375618 FZD9O00144 591 aa20.14■□□□□ 0.81
C11orf88-202ENST00000375618 RABL6Q3YEC7 729 aaPredicted RBP20.14■□□□□ 0.81
C11orf88-202ENST00000375618 LARGE2Q8N3Y3 721 aa20.14■□□□□ 0.81
C11orf88-202ENST00000375618 TBC1D16Q8TBP0 767 aa20.14■□□□□ 0.81
C11orf88-202ENST00000375618 ZNF594Q96JF6 807 aaPredicted RBP20.14■□□□□ 0.81
C11orf88-202ENST00000375618 MEIS3Q99687 375 aa20.14■□□□□ 0.81
C11orf88-202ENST00000375618 PODXL2Q9NZ53 605 aa20.14■□□□□ 0.81
C11orf88-202ENST00000375618 ANKRD18BA2A2Z9 1011 aa20.13■□□□□ 0.81
C11orf88-202ENST00000375618 POTECB2RU33 542 aa20.13■□□□□ 0.81
C11orf88-202ENST00000375618 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
C11orf88-202ENST00000375618 DDNO94850 711 aaPredicted RBP20.13■□□□□ 0.81
C11orf88-202ENST00000375618 KIAA2012Q0VF49 1180 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms