RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 VPS53Q5VIR6 699 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 NFATC2IPQ8NCF5 419 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 CCDC112Q8NEF3 446 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 A0A1B0GVL5 298 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 HMGN5P82970 282 aaKnown RBP13.91□□□□□ -0.18
MCF2L-202ENST00000375597 TTLL5Q6EMB2 1281 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 MAP7D2Q96T17 732 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 TOMM22Q9NS69 142 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 GRM8O00222 908 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 MCM5P33992 734 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 CCDC144BQ3MJ40 725 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 LEO1Q8WVC0 666 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-202ENST00000375597 EVI5LQ96CN4 794 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 ORAI2Q96SN7 254 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 CGNQ9P2M7 1197 aaKnown RBP13.91□□□□□ -0.18
MCF2L-202ENST00000375597 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-202ENST00000375597 AATKQ6ZMQ8 1374 aa13.91□□□□□ -0.18
MCF2L-202ENST00000375597 GNL2Q13823 731 aaKnown RBP13.9□□□□□ -0.18
MCF2L-202ENST00000375597 CCDC73Q6ZRK6 1079 aa13.9□□□□□ -0.18
MCF2L-202ENST00000375597 C11orf57Q6ZUT1 292 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-202ENST00000375597 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
MCF2L-202ENST00000375597 CCAR1Q8IX12 1150 aaKnown RBP13.9□□□□□ -0.18
MCF2L-202ENST00000375597 APPP05067 770 aa13.9□□□□□ -0.18
MCF2L-202ENST00000375597 PSMA5P28066 241 aa13.9□□□□□ -0.18
MCF2L-202ENST00000375597 CACTINQ8WUQ7 758 aaKnown RBP13.9□□□□□ -0.18
MCF2L-202ENST00000375597 ZBTB3Q9H5J0 574 aa13.9□□□□□ -0.18
MCF2L-202ENST00000375597 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
MCF2L-202ENST00000375597 AOPEPQ8N6M6 819 aa13.9□□□□□ -0.18
MCF2L-202ENST00000375597 KINO60870 393 aaKnown RBP13.89□□□□□ -0.19
MCF2L-202ENST00000375597 MARCKSP29966 332 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-202ENST00000375597 FSIP1Q8NA03 581 aa13.89□□□□□ -0.19
MCF2L-202ENST00000375597 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-202ENST00000375597 KIAA1524Q8TCG1 905 aa13.89□□□□□ -0.19
MCF2L-202ENST00000375597 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
MCF2L-202ENST00000375597 PHF8Q9UPP1 1060 aa13.89□□□□□ -0.19
MCF2L-202ENST00000375597 A0A087WZG4 1122 aa13.89□□□□□ -0.19
MCF2L-202ENST00000375597 NEK1Q96PY6 1258 aa13.89□□□□□ -0.19
MCF2L-202ENST00000375597 KAT6BQ8WYB5 2073 aa13.88□□□□□ -0.19
MCF2L-202ENST00000375597 PLEKHO1Q53GL0 409 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-202ENST00000375597 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
MCF2L-202ENST00000375597 ST7Q9NRC1 585 aa13.88□□□□□ -0.19
MCF2L-202ENST00000375597 IGSF1Q8N6C5 1336 aa13.88□□□□□ -0.19
MCF2L-202ENST00000375597 USP6P35125 1406 aa13.88□□□□□ -0.19
MCF2L-202ENST00000375597 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-202ENST00000375597 ZBTB22O15209 634 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 SKILP12757 684 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 TNRQ92752 1358 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 ZSCAN31Q96LW9 406 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-202ENST00000375597 ZSWIM4Q9H7M6 989 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 ZSWIM6Q9HCJ5 1215 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 SH2B1Q9NRF2 756 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-202ENST00000375597 SBNO1A3KN83 1393 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 DDX58O95786 925 aaKnown RBP13.87□□□□□ -0.19
MCF2L-202ENST00000375597 PDCP20941 246 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 SKIDA1Q1XH10 827 aa13.87□□□□□ -0.19
MCF2L-202ENST00000375597 PLEKHG3A1L390 1219 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-202ENST00000375597 SPECC1Q5M775 1068 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 LMBR1LQ6UX01 489 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 KSR2Q6VAB6 950 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 ANKRD24Q8TF21 1146 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 DLC1Q96QB1 1528 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 UVSSAQ2YD98 709 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 KIF24Q5T7B8 1368 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 ZSCAN25Q6NSZ9 544 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 PDILTQ8N807 584 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 CPLX1O14810 134 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 TOB2Q14106 344 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-202ENST00000375597 NECTIN1Q15223 517 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 RAPGEF4Q8WZA2 1011 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 PRIMPOLQ96LW4 560 aa13.86□□□□□ -0.19
MCF2L-202ENST00000375597 ZNF75DP51815 510 aa13.85□□□□□ -0.19
MCF2L-202ENST00000375597 POLA2Q14181 598 aa13.85□□□□□ -0.19
MCF2L-202ENST00000375597 STK38Q15208 465 aa13.85□□□□□ -0.19
MCF2L-202ENST00000375597 TAF7LQ5H9L4 462 aa13.85□□□□□ -0.19
MCF2L-202ENST00000375597 TMC6Q7Z403 805 aa13.85□□□□□ -0.19
MCF2L-202ENST00000375597 USP28Q96RU2 1077 aa13.85□□□□□ -0.19
MCF2L-202ENST00000375597 DBNLQ9UJU6 430 aaKnown RBP13.85□□□□□ -0.19
MCF2L-202ENST00000375597 PTPDC1A2A3K4 754 aa13.85□□□□□ -0.19
MCF2L-202ENST00000375597 ELF2Q15723 593 aa13.85□□□□□ -0.19
MCF2L-202ENST00000375597 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-202ENST00000375597 CEP135Q66GS9 1140 aa13.84□□□□□ -0.19
MCF2L-202ENST00000375597 PI16Q6UXB8 463 aa13.84□□□□□ -0.19
MCF2L-202ENST00000375597 GTF3C6Q969F1 213 aa13.84□□□□□ -0.19
MCF2L-202ENST00000375597 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
MCF2L-202ENST00000375597 POLR3GO15318 223 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-202ENST00000375597 ZNF215Q9UL58 517 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-202ENST00000375597 GIGYF1O75420 1035 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-202ENST00000375597 CYP21A2P08686 494 aa13.84□□□□□ -0.19
MCF2L-202ENST00000375597 SCRN1Q12765 414 aa13.84□□□□□ -0.19
MCF2L-202ENST00000375597 PTPN14Q15678 1187 aa13.84□□□□□ -0.19
MCF2L-202ENST00000375597 ADCY9O60503 1353 aa13.84□□□□□ -0.19
MCF2L-202ENST00000375597 RNMTO43148 476 aaKnown RBP13.83□□□□□ -0.19
MCF2L-202ENST00000375597 RRP12Q5JTH9 1297 aaKnown RBP13.83□□□□□ -0.2
MCF2L-202ENST00000375597 ERC1Q8IUD2 1116 aa13.83□□□□□ -0.2
MCF2L-202ENST00000375597 ZNF496Q96IT1 587 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-202ENST00000375597 AXIN2Q9Y2T1 843 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms