RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PNMA6EA0A0J9YXQ4 647 aa14.36□□□□□ -0.11
C9orf3-203ENST00000375315 CEP85Q6P2H3 762 aa14.36□□□□□ -0.11
C9orf3-203ENST00000375315 RGS12O14924 1447 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 RAD51AP2Q09MP3 1159 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 DDB1Q16531 1140 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 TPD52L1Q16890 204 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-203ENST00000375315 PIGBQ92521 554 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 MYD88Q99836 296 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 USP44Q9H0E7 712 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 AP5Z1O43299 807 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 GNAI2P04899 355 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 SLFNL1Q499Z3 407 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 HSPA1LP34931 641 aa14.35□□□□□ -0.11
C9orf3-203ENST00000375315 BMS1Q14692 1282 aaKnown RBP14.35□□□□□ -0.11
C9orf3-203ENST00000375315 LTBP4Q8N2S1 1624 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 SDSP20132 328 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 FUCA2Q9BTY2 467 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 IL1RAPL2Q9NP60 686 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 USP54Q70EL1 1684 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 RNF20Q5VTR2 975 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 CEP135Q66GS9 1140 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 DRC7Q8IY82 874 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 KIF1BPQ96EK5 621 aa14.34□□□□□ -0.11
C9orf3-203ENST00000375315 GEMIN8Q9NWZ8 242 aaKnown RBP14.34□□□□□ -0.11
C9orf3-203ENST00000375315 MCCP23508 829 aa14.33□□□□□ -0.11
C9orf3-203ENST00000375315 CCDC186Q7Z3E2 898 aa14.33□□□□□ -0.11
C9orf3-203ENST00000375315 CERKQ8TCT0 537 aa14.33□□□□□ -0.11
C9orf3-203ENST00000375315 ZNF592Q92610 1267 aa14.33□□□□□ -0.11
C9orf3-203ENST00000375315 RASSF4Q9H2L5 321 aa14.33□□□□□ -0.11
C9orf3-203ENST00000375315 BABAM1Q9NWV8 329 aa14.33□□□□□ -0.11
C9orf3-203ENST00000375315 CCDC192P0DO97 292 aa14.33□□□□□ -0.12
C9orf3-203ENST00000375315 TEX35Q5T0J7 233 aa14.33□□□□□ -0.12
C9orf3-203ENST00000375315 GIMAP6Q6P9H5 292 aa14.33□□□□□ -0.12
C9orf3-203ENST00000375315 TTLL7Q6ZT98 887 aa14.33□□□□□ -0.12
C9orf3-203ENST00000375315 ERO1AQ96HE7 468 aa14.33□□□□□ -0.12
C9orf3-203ENST00000375315 COL18A1P39060 1754 aa14.33□□□□□ -0.12
C9orf3-203ENST00000375315 RBM6P78332 1123 aaKnown RBP14.32□□□□□ -0.12
C9orf3-203ENST00000375315 CTR9Q6PD62 1173 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 FBXO38Q6PIJ6 1188 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 CCDC85AQ96PX6 553 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-203ENST00000375315 DDX21Q9NR30 783 aaKnown RBP eCLIP14.32□□□□□ -0.12
C9orf3-203ENST00000375315 CHMP3Q9Y3E7 222 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 KCNQ2O43526 872 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 OS9Q13438 667 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-203ENST00000375315 PDIA6Q15084 440 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 TPRNQ4KMQ1 711 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 RSPH14Q9UHP6 348 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 SRGAP3O43295 1099 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 ANKRD44Q8N8A2 993 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 SIL1Q9H173 461 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
C9orf3-203ENST00000375315 ST7Q9NRC1 585 aa14.31□□□□□ -0.12
C9orf3-203ENST00000375315 ZNF215Q9UL58 517 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-203ENST00000375315 GNAI3P08754 354 aa14.31□□□□□ -0.12
C9orf3-203ENST00000375315 KSR2Q6VAB6 950 aa14.31□□□□□ -0.12
C9orf3-203ENST00000375315 HYPKQ9NX55 129 aa14.31□□□□□ -0.12
C9orf3-203ENST00000375315 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-203ENST00000375315 CNPY2Q9Y2B0 182 aa14.31□□□□□ -0.12
C9orf3-203ENST00000375315 SURF6O75683 361 aaKnown RBP14.3□□□□□ -0.12
C9orf3-203ENST00000375315 DDX58O95786 925 aaKnown RBP14.3□□□□□ -0.12
C9orf3-203ENST00000375315 BEND3Q5T5X7 828 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 ANKRD13DQ6ZTN6 518 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
C9orf3-203ENST00000375315 PPP1R42Q7Z4L9 355 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 TXLNBQ8N3L3 684 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 KLHDC4Q8TBB5 520 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 FAM200AQ8TCP9 573 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 PA2G4Q9UQ80 394 aaKnown RBP14.3□□□□□ -0.12
C9orf3-203ENST00000375315 NBPF26B4DH59 902 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 LRMPQ12912 555 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 NBPF14Q5TI25 921 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 NBPF10Q6P3W6 841 aaKnown RBP14.3□□□□□ -0.12
C9orf3-203ENST00000375315 NBPF15Q8N660 670 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 ATP6V1DQ9Y5K8 247 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 ADCY9O60503 1353 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 ZSCAN25Q6NSZ9 544 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 PTF1AQ7RTS3 328 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 USP21Q9UK80 565 aa14.3□□□□□ -0.12
C9orf3-203ENST00000375315 NEXNQ0ZGT2 675 aa14.29□□□□□ -0.12
C9orf3-203ENST00000375315 ELF2Q15723 593 aa14.29□□□□□ -0.12
C9orf3-203ENST00000375315 MUM1L1Q5H9M0 696 aa14.29□□□□□ -0.12
C9orf3-203ENST00000375315 NCAPD2Q15021 1401 aa14.29□□□□□ -0.12
C9orf3-203ENST00000375315 RPAP1Q9BWH6 1393 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-203ENST00000375315 ERVV-2B6SEH9 535 aa14.29□□□□□ -0.12
C9orf3-203ENST00000375315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 HMMRO75330 724 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 MARCH10Q8NA82 808 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 ATG3Q9NT62 314 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 MAP4K4O95819 1239 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 GPTP24298 496 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 GTF2A1P52655 376 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 UBE3BQ7Z3V4 1068 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms