RNA–Protein interactions for RNA: ENST00000374738.3

PGAP1-202, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 5

Gene PGAP1, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-202ENST00000374738 TNRC6CQ9HCJ0 1690 aaKnown RBP27.65■■■□□ 2.02
PGAP1-202ENST00000374738 TTLL11Q8NHH1 800 aa27.65■■■□□ 2.02
PGAP1-202ENST00000374738 JARID2Q92833 1246 aaPredicted RBP27.65■■■□□ 2.02
PGAP1-202ENST00000374738 BRCA1P38398 1863 aaKnown RBP27.64■■■□□ 2.02
PGAP1-202ENST00000374738 GRAPQ13588 217 aa27.64■■■□□ 2.02
PGAP1-202ENST00000374738 GRAPLQ8TC17 118 aaPredicted RBP27.64■■■□□ 2.02
PGAP1-202ENST00000374738 COL11A2P13942 1736 aaPredicted RBP27.63■■■□□ 2.01
PGAP1-202ENST00000374738 NBPF7P0C2Y1 421 aaPredicted RBP27.62■■■□□ 2.01
PGAP1-202ENST00000374738 DZIP1LQ8IYY4 767 aaKnown RBP27.62■■■□□ 2.01
PGAP1-202ENST00000374738 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.62■■■□□ 2.01
PGAP1-202ENST00000374738 FOXO4P98177 505 aa27.61■■■□□ 2.01
PGAP1-202ENST00000374738 DDX60Q8IY21 1712 aaKnown RBP27.61■■■□□ 2.01
PGAP1-202ENST00000374738 LAMB2P55268 1798 aa27.6■■■□□ 2.01
PGAP1-202ENST00000374738 RTKN2Q8IZC4 609 aa27.6■■■□□ 2.01
PGAP1-202ENST00000374738 WWC3Q9ULE0 1092 aa27.6■■■□□ 2.01
PGAP1-202ENST00000374738 C21orf2O43822 256 aa27.59■■■□□ 2.01
PGAP1-202ENST00000374738 RPS8P62241 208 aaKnown RBP27.59■■■□□ 2.01
PGAP1-202ENST00000374738 SP8Q8IXZ3 490 aa27.59■■■□□ 2.01
PGAP1-202ENST00000374738 FTSJ3Q8IY81 847 aaKnown RBP27.59■■■□□ 2.01
PGAP1-202ENST00000374738 ATP6V0A2Q9Y487 856 aa27.59■■■□□ 2.01
PGAP1-202ENST00000374738 PPEF1O14829 653 aaPredicted RBP27.58■■■□□ 2.01
PGAP1-202ENST00000374738 GNAI3P08754 354 aa27.58■■■□□ 2.01
PGAP1-202ENST00000374738 RABL6Q3YEC7 729 aaPredicted RBP27.58■■■□□ 2.01
PGAP1-202ENST00000374738 CCDC93Q567U6 631 aa27.58■■■□□ 2.01
PGAP1-202ENST00000374738 CDC5LQ99459 802 aaKnown RBP27.58■■■□□ 2.01
PGAP1-202ENST00000374738 TMX4Q9H1E5 349 aaPredicted RBP27.58■■■□□ 2.01
PGAP1-202ENST00000374738 LTBP3Q9NS15 1303 aa27.58■■■□□ 2.01
PGAP1-202ENST00000374738 ARHGAP27Q6ZUM4 889 aa27.57■■■□□ 2
PGAP1-202ENST00000374738 CLUAP1Q96AJ1 413 aa27.57■■■□□ 2
PGAP1-202ENST00000374738 KAZALD1Q96I82 304 aa27.57■■■□□ 2
PGAP1-202ENST00000374738 ARFGEF1Q9Y6D6 1849 aa27.56■■■□□ 2
PGAP1-202ENST00000374738 UBTFL1P0CB47 393 aaPredicted RBP27.56■■■□□ 2
PGAP1-202ENST00000374738 PDE3AQ14432 1141 aa27.56■■■□□ 2
PGAP1-202ENST00000374738 TMEM57Q8N5G2 664 aa27.56■■■□□ 2
PGAP1-202ENST00000374738 SUCLG2Q96I99 432 aa27.56■■■□□ 2
PGAP1-202ENST00000374738 GREM2Q9H772 168 aa27.55■■■□□ 2
PGAP1-202ENST00000374738 EPHA10Q5JZY3 1008 aa27.54■■■□□ 2
PGAP1-202ENST00000374738 LMBR1LQ6UX01 489 aa27.54■■■□□ 2
PGAP1-202ENST00000374738 ANKRD18AQ8IVF6 992 aa27.54■■■□□ 2
PGAP1-202ENST00000374738 CELF1Q92879 486 aaKnown RBP27.54■■■□□ 2
PGAP1-202ENST00000374738 SEC31BQ9NQW1 1179 aa27.54■■■□□ 2
PGAP1-202ENST00000374738 TNNQ9UQP3 1299 aa27.54■■■□□ 2
PGAP1-202ENST00000374738 PSMD1Q99460 953 aa27.53■■■□□ 2
PGAP1-202ENST00000374738 ANKRD18BA2A2Z9 1011 aa27.52■■■□□ 2
PGAP1-202ENST00000374738 ITGA6P23229 1130 aa27.52■■■□□ 2
PGAP1-202ENST00000374738 IFIT5Q13325 482 aaKnown RBP27.52■■■□□ 2
PGAP1-202ENST00000374738 BSDC1Q9NW68 430 aaPredicted RBP27.52■■■□□ 2
PGAP1-202ENST00000374738 SLX4Q8IY92 1834 aa27.52■■■□□ 2
PGAP1-202ENST00000374738 RLBP1P12271 317 aa27.51■■□□□ 1.99
PGAP1-202ENST00000374738 MEIS3Q99687 375 aa27.51■■□□□ 1.99
PGAP1-202ENST00000374738 VPS33BQ9H267 617 aa27.51■■□□□ 1.99
PGAP1-202ENST00000374738 BICC1Q9H694 974 aaKnown RBP27.51■■□□□ 1.99
PGAP1-202ENST00000374738 SNED1Q8TER0 1413 aa27.5■■□□□ 1.99
PGAP1-202ENST00000374738 NFKBIEO00221 500 aa27.5■■□□□ 1.99
PGAP1-202ENST00000374738 CCDC57Q2TAC2 916 aa27.5■■□□□ 1.99
PGAP1-202ENST00000374738 FAM161AQ3B820 660 aa27.5■■□□□ 1.99
PGAP1-202ENST00000374738 ANKRD44Q8N8A2 993 aa27.5■■□□□ 1.99
PGAP1-202ENST00000374738 TAOK3Q9H2K8 898 aa27.5■■□□□ 1.99
PGAP1-202ENST00000374738 CHMP4BQ9H444 224 aaKnown RBP27.5■■□□□ 1.99
PGAP1-202ENST00000374738 ZBTB7BO15156 539 aaPredicted RBP27.49■■□□□ 1.99
PGAP1-202ENST00000374738 IGHMBP2P38935 993 aaKnown RBP27.49■■□□□ 1.99
PGAP1-202ENST00000374738 FKBP4Q02790 459 aaKnown RBP eCLIP27.49■■□□□ 1.99
PGAP1-202ENST00000374738 CCDC85AQ96PX6 553 aaPredicted RBP27.49■■□□□ 1.99
PGAP1-202ENST00000374738 RTFDC1Q9BY42 306 aaPredicted RBP27.49■■□□□ 1.99
PGAP1-202ENST00000374738 ZNF219Q9P2Y4 722 aaPredicted RBP27.49■■□□□ 1.99
PGAP1-202ENST00000374738 GNAI2P04899 355 aa27.47■■□□□ 1.99
PGAP1-202ENST00000374738 LMNB1P20700 586 aa27.47■■□□□ 1.99
PGAP1-202ENST00000374738 ITPRIPQ8IWB1 547 aa27.47■■□□□ 1.99
PGAP1-202ENST00000374738 SUPT20HQ8NEM7 779 aa27.47■■□□□ 1.99
PGAP1-202ENST00000374738 PANK1Q8TE04 598 aa27.47■■□□□ 1.99
PGAP1-202ENST00000374738 PODXL2Q9NZ53 605 aa27.47■■□□□ 1.99
PGAP1-202ENST00000374738 MVPQ14764 893 aaKnown RBP27.46■■□□□ 1.99
PGAP1-202ENST00000374738 MPNDQ8N594 471 aa27.46■■□□□ 1.99
PGAP1-202ENST00000374738 PLIN1O60240 522 aa27.45■■□□□ 1.98
PGAP1-202ENST00000374738 MTX1Q13505 466 aa27.45■■□□□ 1.98
PGAP1-202ENST00000374738 OLFM4Q6UX06 510 aa27.45■■□□□ 1.98
PGAP1-202ENST00000374738 MPHOSPH8Q99549 860 aa27.45■■□□□ 1.98
PGAP1-202ENST00000374738 DDX19BQ9UMR2 479 aa27.45■■□□□ 1.98
PGAP1-202ENST00000374738 CHMP3Q9Y3E7 222 aa27.45■■□□□ 1.98
PGAP1-202ENST00000374738 LRRFIP2Q9Y608 721 aaKnown RBP27.45■■□□□ 1.98
PGAP1-202ENST00000374738 DPP8Q6V1X1 898 aaPredicted RBP27.44■■□□□ 1.98
PGAP1-202ENST00000374738 ZC3H4Q9UPT8 1303 aaKnown RBP27.43■■□□□ 1.98
PGAP1-202ENST00000374738 MINPP1Q9UNW1 487 aa27.43■■□□□ 1.98
PGAP1-202ENST00000374738 MYH3P11055 1940 aa27.43■■□□□ 1.98
PGAP1-202ENST00000374738 RRP1P56182 461 aaKnown RBP27.42■■□□□ 1.98
PGAP1-202ENST00000374738 ANKRD2Q9GZV1 360 aa27.42■■□□□ 1.98
PGAP1-202ENST00000374738 FBXO3Q9UK99 471 aa27.42■■□□□ 1.98
PGAP1-202ENST00000374738 RASSF7Q02833 373 aa27.41■■□□□ 1.98
PGAP1-202ENST00000374738 TAF7LQ5H9L4 462 aa27.41■■□□□ 1.98
PGAP1-202ENST00000374738 NSFL1CQ9UNZ2 370 aaKnown RBP27.41■■□□□ 1.98
PGAP1-202ENST00000374738 C9orf131Q5VYM1 1079 aa27.4■■□□□ 1.98
PGAP1-202ENST00000374738 LDHAL6AQ6ZMR3 332 aa27.4■■□□□ 1.98
PGAP1-202ENST00000374738 XDHP47989 1333 aa27.4■■□□□ 1.98
PGAP1-202ENST00000374738 GOLGB1Q14789 3259 aaKnown RBP27.39■■□□□ 1.98
PGAP1-202ENST00000374738 FER1L6Q2WGJ9 1857 aa27.39■■□□□ 1.98
PGAP1-202ENST00000374738 RFX5P48382 616 aaPredicted RBP27.39■■□□□ 1.98
PGAP1-202ENST00000374738 GPSM2P81274 684 aa27.39■■□□□ 1.98
PGAP1-202ENST00000374738 LRRC37AA6NMS7 1700 aa27.38■■□□□ 1.97
PGAP1-202ENST00000374738 ATP2B4P23634 1241 aa27.38■■□□□ 1.97
PGAP1-202ENST00000374738 IARSP41252 1262 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms