RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 RRP1P56182 461 aaKnown RBP14.3□□□□□ -0.12
HSPG2-202ENST00000374676 CCDC152Q4G0S7 254 aa14.3□□□□□ -0.12
HSPG2-202ENST00000374676 TTLL11Q8NHH1 800 aa14.3□□□□□ -0.12
HSPG2-202ENST00000374676 PANK1Q8TE04 598 aa14.3□□□□□ -0.12
HSPG2-202ENST00000374676 KAZALD1Q96I82 304 aa14.3□□□□□ -0.12
HSPG2-202ENST00000374676 CTSWP56202 376 aa14.29□□□□□ -0.12
HSPG2-202ENST00000374676 FOXO4P98177 505 aa14.29□□□□□ -0.12
HSPG2-202ENST00000374676 DALRD3Q5D0E6 543 aaKnown RBP14.29□□□□□ -0.12
HSPG2-202ENST00000374676 DDX46Q7L014 1031 aaKnown RBP14.29□□□□□ -0.12
HSPG2-202ENST00000374676 SUCLG2Q96I99 432 aa14.29□□□□□ -0.12
HSPG2-202ENST00000374676 RTL9Q8NET4 1388 aa14.29□□□□□ -0.12
HSPG2-202ENST00000374676 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
HSPG2-202ENST00000374676 ARFGEF1Q9Y6D6 1849 aa14.29□□□□□ -0.12
HSPG2-202ENST00000374676 ZBTB7BO15156 539 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-202ENST00000374676 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-202ENST00000374676 TAF1P21675 1872 aa14.28□□□□□ -0.12
HSPG2-202ENST00000374676 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
HSPG2-202ENST00000374676 EPHA10Q5JZY3 1008 aa14.28□□□□□ -0.12
HSPG2-202ENST00000374676 ITPRIPQ8IWB1 547 aa14.28□□□□□ -0.12
HSPG2-202ENST00000374676 MEIS3Q99687 375 aa14.28□□□□□ -0.12
HSPG2-202ENST00000374676 BBOX1O75936 387 aa14.27□□□□□ -0.13
HSPG2-202ENST00000374676 RABL6Q3YEC7 729 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-202ENST00000374676 C20orf194Q5TEA3 1177 aa14.27□□□□□ -0.13
HSPG2-202ENST00000374676 CACNA1SQ13698 1873 aa14.27□□□□□ -0.13
HSPG2-202ENST00000374676 GRAPQ13588 217 aa14.26□□□□□ -0.13
HSPG2-202ENST00000374676 PRPF40BQ6NWY9 871 aaKnown RBP14.26□□□□□ -0.13
HSPG2-202ENST00000374676 LMBR1LQ6UX01 489 aa14.26□□□□□ -0.13
HSPG2-202ENST00000374676 TMC4Q7Z404 712 aa14.26□□□□□ -0.13
HSPG2-202ENST00000374676 ANKRD44Q8N8A2 993 aa14.26□□□□□ -0.13
HSPG2-202ENST00000374676 GRAPLQ8TC17 118 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-202ENST00000374676 C7orf43Q8WVR3 580 aa14.26□□□□□ -0.13
HSPG2-202ENST00000374676 CHMP4BQ9H444 224 aaKnown RBP14.26□□□□□ -0.13
HSPG2-202ENST00000374676 BICC1Q9H694 974 aaKnown RBP14.26□□□□□ -0.13
HSPG2-202ENST00000374676 DDX19BQ9UMR2 479 aa14.26□□□□□ -0.13
HSPG2-202ENST00000374676 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
HSPG2-202ENST00000374676 COG6Q9Y2V7 657 aa14.26□□□□□ -0.13
HSPG2-202ENST00000374676 GNAI2P04899 355 aa14.25□□□□□ -0.13
HSPG2-202ENST00000374676 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
HSPG2-202ENST00000374676 CCDC85AQ96PX6 553 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-202ENST00000374676 GREM2Q9H772 168 aa14.25□□□□□ -0.13
HSPG2-202ENST00000374676 SEC31BQ9NQW1 1179 aa14.25□□□□□ -0.13
HSPG2-202ENST00000374676 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
HSPG2-202ENST00000374676 GRIN3BO60391 1043 aa14.24□□□□□ -0.13
HSPG2-202ENST00000374676 YBX3P16989 372 aaKnown RBP eCLIP14.24□□□□□ -0.13
HSPG2-202ENST00000374676 GPR162Q16538 588 aa14.24□□□□□ -0.13
HSPG2-202ENST00000374676 CC2D2BQ6DHV5 1058 aa14.24□□□□□ -0.13
HSPG2-202ENST00000374676 CELF1Q92879 486 aaKnown RBP14.24□□□□□ -0.13
HSPG2-202ENST00000374676 CDC5LQ99459 802 aaKnown RBP14.24□□□□□ -0.13
HSPG2-202ENST00000374676 WWC3Q9ULE0 1092 aa14.24□□□□□ -0.13
HSPG2-202ENST00000374676 SUPT16HQ9Y5B9 1047 aaKnown RBP14.24□□□□□ -0.13
HSPG2-202ENST00000374676 LRRFIP2Q9Y608 721 aaKnown RBP14.24□□□□□ -0.13
HSPG2-202ENST00000374676 ANKRD18BA2A2Z9 1011 aa14.23□□□□□ -0.13
HSPG2-202ENST00000374676 ITGA6P23229 1130 aa14.23□□□□□ -0.13
HSPG2-202ENST00000374676 IFIT5Q13325 482 aaKnown RBP14.23□□□□□ -0.13
HSPG2-202ENST00000374676 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
HSPG2-202ENST00000374676 FAM161AQ3B820 660 aa14.23□□□□□ -0.13
HSPG2-202ENST00000374676 SOGA3Q5TF21 947 aa14.23□□□□□ -0.13
HSPG2-202ENST00000374676 SP8Q8IXZ3 490 aa14.23□□□□□ -0.13
HSPG2-202ENST00000374676 PPEF1O14829 653 aaPredicted RBP14.22□□□□□ -0.13
HSPG2-202ENST00000374676 C21orf2O43822 256 aa14.22□□□□□ -0.13
HSPG2-202ENST00000374676 MTX1Q13505 466 aa14.22□□□□□ -0.13
HSPG2-202ENST00000374676 GRIPAP1Q4V328 841 aa14.22□□□□□ -0.13
HSPG2-202ENST00000374676 ANKRD18AQ8IVF6 992 aa14.22□□□□□ -0.13
HSPG2-202ENST00000374676 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
HSPG2-202ENST00000374676 ZBTB40Q9NUA8 1239 aa14.22□□□□□ -0.13
HSPG2-202ENST00000374676 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
HSPG2-202ENST00000374676 ATP6V0A2Q9Y487 856 aa14.22□□□□□ -0.13
HSPG2-202ENST00000374676 FER1L6Q2WGJ9 1857 aa14.21□□□□□ -0.13
HSPG2-202ENST00000374676 IGHMBP2P38935 993 aaKnown RBP14.21□□□□□ -0.13
HSPG2-202ENST00000374676 BSDC1Q9NW68 430 aaPredicted RBP14.21□□□□□ -0.13
HSPG2-202ENST00000374676 COL4A1P02462 1669 aa14.2□□□□□ -0.14
HSPG2-202ENST00000374676 GOLGB1Q14789 3259 aaKnown RBP14.2□□□□□ -0.14
HSPG2-202ENST00000374676 CENPBP07199 599 aaPredicted RBP14.2□□□□□ -0.14
HSPG2-202ENST00000374676 RFX5P48382 616 aaPredicted RBP14.2□□□□□ -0.14
HSPG2-202ENST00000374676 CCDC93Q567U6 631 aa14.2□□□□□ -0.14
HSPG2-202ENST00000374676 RTKN2Q8IZC4 609 aa14.2□□□□□ -0.14
HSPG2-202ENST00000374676 TMX4Q9H1E5 349 aaPredicted RBP14.2□□□□□ -0.14
HSPG2-202ENST00000374676 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
HSPG2-202ENST00000374676 LRRC37AA6NMS7 1700 aa14.19□□□□□ -0.14
HSPG2-202ENST00000374676 ATP8B2P98198 1209 aa14.19□□□□□ -0.14
HSPG2-202ENST00000374676 MPHOSPH8Q99549 860 aa14.19□□□□□ -0.14
HSPG2-202ENST00000374676 SPEF2Q9C093 1822 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 SNED1Q8TER0 1413 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 SRGAP3O43295 1099 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 TAF7LQ5H9L4 462 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 OLFM4Q6UX06 510 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 ARHGAP27Q6ZUM4 889 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 ZNF594Q96JF6 807 aaPredicted RBP14.18□□□□□ -0.14
HSPG2-202ENST00000374676 C1orf115Q9H7X2 142 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 SBF1O95248 1867 aa14.18□□□□□ -0.14
HSPG2-202ENST00000374676 LTBP3Q9NS15 1303 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 CCDC88AQ3V6T2 1871 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 PTPN12Q05209 780 aaKnown RBP14.17□□□□□ -0.14
HSPG2-202ENST00000374676 AAMPQ13685 434 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 LDHAL6AQ6ZMR3 332 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 RPAP2Q8IXW5 612 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-202ENST00000374676 MPNDQ8N594 471 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 SSH3Q8TE77 659 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms