RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 TFCP2Q12800 502 aa19.31■□□□□ 0.68
NIPAL3-204ENST00000374399 LRRC24Q50LG9 513 aa19.31■□□□□ 0.68
NIPAL3-204ENST00000374399 PUS3Q9BZE2 481 aaKnown RBP19.31■□□□□ 0.68
NIPAL3-204ENST00000374399 EYA2O00167 538 aa19.3■□□□□ 0.68
NIPAL3-204ENST00000374399 HCLS1P14317 486 aaPredicted RBP19.3■□□□□ 0.68
NIPAL3-204ENST00000374399 TBC1D9Q6ZT07 1266 aa19.3■□□□□ 0.68
NIPAL3-204ENST00000374399 TLR7Q9NYK1 1049 aaKnown RBP19.3■□□□□ 0.68
NIPAL3-204ENST00000374399 PHF14O94880 888 aa19.29■□□□□ 0.68
NIPAL3-204ENST00000374399 TRAPPC3LQ5T215 181 aa19.29■□□□□ 0.68
NIPAL3-204ENST00000374399 AACSQ86V21 672 aa19.29■□□□□ 0.68
NIPAL3-204ENST00000374399 LRP5O75197 1615 aa19.29■□□□□ 0.68
NIPAL3-204ENST00000374399 RGPD3A6NKT7 1758 aaPredicted RBP19.29■□□□□ 0.68
NIPAL3-204ENST00000374399 RGPD4Q7Z3J3 1758 aa19.29■□□□□ 0.68
NIPAL3-204ENST00000374399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 CIAO1O76071 339 aa19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 APBA3O96018 575 aa19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 COL4A1P02462 1669 aa19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 ZPR1O75312 459 aa19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 ADRA2BP18089 450 aa19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 CCDC57Q2TAC2 916 aa19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 TNNI3KQ59H18 835 aa19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 CCDC8Q9H0W5 538 aaPredicted RBP19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 FPGT-TNNI3KV9GXZ4 949 aa19.28■□□□□ 0.68
NIPAL3-204ENST00000374399 TTC41PQ6P2S7 1318 aa19.27■□□□□ 0.68
NIPAL3-204ENST00000374399 CDC45O75419 566 aa19.27■□□□□ 0.68
NIPAL3-204ENST00000374399 ITGA6P23229 1130 aa19.27■□□□□ 0.68
NIPAL3-204ENST00000374399 IL15P40933 162 aaPredicted RBP19.27■□□□□ 0.68
NIPAL3-204ENST00000374399 IFIT5Q13325 482 aaKnown RBP19.27■□□□□ 0.68
NIPAL3-204ENST00000374399 ERFEQ4G0M1 354 aa19.27■□□□□ 0.68
NIPAL3-204ENST00000374399 BICDL1Q6ZP65 573 aa19.27■□□□□ 0.68
NIPAL3-204ENST00000374399 RFC4P35249 363 aa19.26■□□□□ 0.67
NIPAL3-204ENST00000374399 IFIT2P09913 472 aaKnown RBP19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 ZNF827Q17R98 1081 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 C3orf67Q6ZVT6 689 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 ECHDC1Q9NTX5 307 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 DBNLQ9UJU6 430 aaKnown RBP19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 FBXO3Q9UK99 471 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 ABCC12Q96J65 1359 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 RIC1Q4ADV7 1423 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 AK9Q5TCS8 1911 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 SSFA2P28290 1259 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 AKT1S1Q96B36 256 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 RIPOR2Q9Y4F9 1068 aa19.25■□□□□ 0.67
NIPAL3-204ENST00000374399 SLC10A5Q5PT55 438 aa19.24■□□□□ 0.67
NIPAL3-204ENST00000374399 GPR108Q9NPR9 543 aa19.24■□□□□ 0.67
NIPAL3-204ENST00000374399 RTL9Q8NET4 1388 aa19.24■□□□□ 0.67
NIPAL3-204ENST00000374399 ANKRD18BA2A2Z9 1011 aa19.23■□□□□ 0.67
NIPAL3-204ENST00000374399 SETDB2Q96T68 719 aa19.23■□□□□ 0.67
NIPAL3-204ENST00000374399 ZNF609O15014 1411 aa19.23■□□□□ 0.67
NIPAL3-204ENST00000374399 GYS1P13807 737 aa19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 TAF1P21675 1872 aa19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 NFIXQ14938 502 aa19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 SPEF2Q9C093 1822 aa19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 SEC31BQ9NQW1 1179 aa19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 GLRX3O76003 335 aaKnown RBP19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 MAP4K4O95819 1239 aaPredicted RBP19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 TBC1D32Q96NH3 1257 aa19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 DBNDD2Q9BQY9 259 aa19.22■□□□□ 0.67
NIPAL3-204ENST00000374399 SF3B3Q15393 1217 aaKnown RBP19.21■□□□□ 0.67
NIPAL3-204ENST00000374399 TNRC6CQ9HCJ0 1690 aaKnown RBP19.21■□□□□ 0.67
NIPAL3-204ENST00000374399 TIMM10P62072 90 aa19.2■□□□□ 0.66
NIPAL3-204ENST00000374399 VGLL2Q8N8G2 317 aa19.2■□□□□ 0.66
NIPAL3-204ENST00000374399 TRIM6-TRIM34B2RNG4 842 aa19.2■□□□□ 0.66
NIPAL3-204ENST00000374399 TAF7LQ5H9L4 462 aa19.2■□□□□ 0.66
NIPAL3-204ENST00000374399 LDHAL6AQ6ZMR3 332 aa19.2■□□□□ 0.66
NIPAL3-204ENST00000374399 ERC2O15083 957 aa19.19■□□□□ 0.66
NIPAL3-204ENST00000374399 CCDC152Q4G0S7 254 aa19.19■□□□□ 0.66
NIPAL3-204ENST00000374399 NBPF5PQ86XG9 351 aaPredicted RBP19.19■□□□□ 0.66
NIPAL3-204ENST00000374399 RILPL2Q969X0 211 aa19.19■□□□□ 0.66
NIPAL3-204ENST00000374399 GPATCH3Q96I76 525 aa19.19■□□□□ 0.66
NIPAL3-204ENST00000374399 NYXQ9GZU5 481 aa19.19■□□□□ 0.66
NIPAL3-204ENST00000374399 CARMIL3Q8ND23 1372 aa19.18■□□□□ 0.66
NIPAL3-204ENST00000374399 HSP90B1P14625 803 aaKnown RBP19.18■□□□□ 0.66
NIPAL3-204ENST00000374399 CHMLP26374 656 aa19.18■□□□□ 0.66
NIPAL3-204ENST00000374399 TM4SF1P30408 202 aa19.18■□□□□ 0.66
NIPAL3-204ENST00000374399 CCDC24Q8N4L8 307 aa19.18■□□□□ 0.66
NIPAL3-204ENST00000374399 CAMKK2Q96RR4 588 aa19.18■□□□□ 0.66
NIPAL3-204ENST00000374399 CEP126Q9P2H0 1117 aa19.18■□□□□ 0.66
NIPAL3-204ENST00000374399 A0A1B0GUL7 405 aa19.17■□□□□ 0.66
NIPAL3-204ENST00000374399 ATP5JP18859 108 aa19.17■□□□□ 0.66
NIPAL3-204ENST00000374399 TPTE2Q6XPS3 522 aa19.17■□□□□ 0.66
NIPAL3-204ENST00000374399 A0A1B0GUL6 1792 aa19.17■□□□□ 0.66
NIPAL3-204ENST00000374399 COL23A1Q86Y22 540 aaPredicted RBP19.17■□□□□ 0.66
NIPAL3-204ENST00000374399 BOLA2Q9H3K6 86 aa19.17■□□□□ 0.66
NIPAL3-204ENST00000374399 HMGB2P26583 209 aaKnown RBP19.16■□□□□ 0.66
NIPAL3-204ENST00000374399 ANP32AP39687 249 aaKnown RBP19.16■□□□□ 0.66
NIPAL3-204ENST00000374399 C22orf23Q9BZE7 217 aa19.16■□□□□ 0.66
NIPAL3-204ENST00000374399 IL25Q9H293 177 aa19.16■□□□□ 0.66
NIPAL3-204ENST00000374399 CNNM1Q9NRU3 951 aa19.16■□□□□ 0.66
NIPAL3-204ENST00000374399 ADORA1P30542 326 aa19.15■□□□□ 0.66
NIPAL3-204ENST00000374399 DDR1Q08345 913 aa19.15■□□□□ 0.66
NIPAL3-204ENST00000374399 EZH2Q15910 746 aaKnown RBP19.15■□□□□ 0.66
NIPAL3-204ENST00000374399 NEUROD6Q96NK8 337 aa19.15■□□□□ 0.66
NIPAL3-204ENST00000374399 TFCP2L1Q9NZI6 479 aa19.15■□□□□ 0.66
NIPAL3-204ENST00000374399 ARAP2Q8WZ64 1704 aa19.15■□□□□ 0.66
NIPAL3-204ENST00000374399 RBM25P49756 843 aaKnown RBP19.14■□□□□ 0.66
NIPAL3-204ENST00000374399 EN1Q05925 392 aaPredicted RBP19.14■□□□□ 0.66
NIPAL3-204ENST00000374399 METTL24Q5JXM2 366 aa19.14■□□□□ 0.66
NIPAL3-204ENST00000374399 CNTROBQ8N137 903 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms