RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 TFCP2L1Q9NZI6 479 aa11.98□□□□□ -0.49
PTPN20-202ENST00000374339 CHMP3Q9Y3E7 222 aa11.98□□□□□ -0.49
PTPN20-202ENST00000374339 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
PTPN20-202ENST00000374339 APBB1O00213 710 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 NTSR2O95665 410 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 CTSWP56202 376 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 CCDC57Q2TAC2 916 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
PTPN20-202ENST00000374339 CARMIL3Q8ND23 1372 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 TUBGCP6Q96RT7 1819 aa11.97□□□□□ -0.49
PTPN20-202ENST00000374339 CSF1RP07333 972 aa11.96□□□□□ -0.49
PTPN20-202ENST00000374339 PDE4AP27815 886 aa11.96□□□□□ -0.49
PTPN20-202ENST00000374339 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
PTPN20-202ENST00000374339 AMIGO3Q86WK7 504 aa11.96□□□□□ -0.49
PTPN20-202ENST00000374339 SKAP1Q86WV1 359 aa11.96□□□□□ -0.49
PTPN20-202ENST00000374339 RHPN1Q8TCX5 695 aa11.96□□□□□ -0.49
PTPN20-202ENST00000374339 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
PTPN20-202ENST00000374339 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
PTPN20-202ENST00000374339 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-202ENST00000374339 RFX5P48382 616 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-202ENST00000374339 PTPN12Q05209 780 aaKnown RBP11.95□□□□□ -0.5
PTPN20-202ENST00000374339 IFIT5Q13325 482 aaKnown RBP11.95□□□□□ -0.5
PTPN20-202ENST00000374339 TPTE2Q6XPS3 522 aa11.95□□□□□ -0.5
PTPN20-202ENST00000374339 NBPF5PQ86XG9 351 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-202ENST00000374339 CLASRPQ8N2M8 674 aaKnown RBP11.95□□□□□ -0.5
PTPN20-202ENST00000374339 TTLL11Q8NHH1 800 aa11.95□□□□□ -0.5
PTPN20-202ENST00000374339 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 SMARCA5O60264 1052 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-202ENST00000374339 CIAO1O76071 339 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 ZNF827Q17R98 1081 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 CCDC152Q4G0S7 254 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 TAF7LQ5H9L4 462 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 SMIM5Q71RC9 77 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 PA2G4Q9UQ80 394 aaKnown RBP11.94□□□□□ -0.5
PTPN20-202ENST00000374339 RTL9Q8NET4 1388 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 CASZ1Q86V15 1759 aa11.94□□□□□ -0.5
PTPN20-202ENST00000374339 ANKRD18BA2A2Z9 1011 aa11.93□□□□□ -0.5
PTPN20-202ENST00000374339 NPHP1O15259 732 aa11.93□□□□□ -0.5
PTPN20-202ENST00000374339 GYS1P13807 737 aa11.93□□□□□ -0.5
PTPN20-202ENST00000374339 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-202ENST00000374339 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
PTPN20-202ENST00000374339 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
PTPN20-202ENST00000374339 PLEKHM2Q8IWE5 1019 aa11.93□□□□□ -0.5
PTPN20-202ENST00000374339 SYNE4Q8N205 404 aa11.93□□□□□ -0.5
PTPN20-202ENST00000374339 SIL1Q9H173 461 aa11.93□□□□□ -0.5
PTPN20-202ENST00000374339 AOX1Q06278 1338 aa11.93□□□□□ -0.5
PTPN20-202ENST00000374339 HCLS1P14317 486 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-202ENST00000374339 ITGA6P23229 1130 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 IL15P40933 162 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-202ENST00000374339 BMP2KLQ5H9B9 411 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 SLC10A5Q5PT55 438 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 GPATCH3Q96I76 525 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 STK32BQ9NY57 414 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 RIC1Q4ADV7 1423 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 EYA2O00167 538 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 IFIT2P09913 472 aaKnown RBP11.92□□□□□ -0.5
PTPN20-202ENST00000374339 MX1P20591 662 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 NFIXQ14938 502 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 ERFEQ4G0M1 354 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 BCL11AQ9H165 835 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 GREM2Q9H772 168 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 IL1RAPL2Q9NP60 686 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 STAP2Q9UGK3 403 aa11.92□□□□□ -0.5
PTPN20-202ENST00000374339 LRP5O75197 1615 aa11.91□□□□□ -0.5
PTPN20-202ENST00000374339 SASH1O94885 1247 aa11.91□□□□□ -0.5
PTPN20-202ENST00000374339 PDE1AP54750 535 aa11.91□□□□□ -0.5
PTPN20-202ENST00000374339 SLC15A2Q16348 729 aa11.91□□□□□ -0.5
PTPN20-202ENST00000374339 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-202ENST00000374339 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
PTPN20-202ENST00000374339 TTC41PQ6P2S7 1318 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 PNPLA7Q6ZV29 1317 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 SALL3Q9BXA9 1300 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 TM4SF1P30408 202 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 ST5P78524 1137 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 SF3B3Q15393 1217 aaKnown RBP11.9□□□□□ -0.5
PTPN20-202ENST00000374339 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 LDHAL6AQ6ZMR3 332 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 ATG9AQ7Z3C6 839 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 COL23A1Q86Y22 540 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-202ENST00000374339 CDC5LQ99459 802 aaKnown RBP11.9□□□□□ -0.5
PTPN20-202ENST00000374339 GPR108Q9NPR9 543 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 AKAP2Q9Y2D5 859 aa11.9□□□□□ -0.5
PTPN20-202ENST00000374339 ERC2O15083 957 aa11.89□□□□□ -0.51
PTPN20-202ENST00000374339 TFCP2Q12800 502 aa11.89□□□□□ -0.51
PTPN20-202ENST00000374339 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-202ENST00000374339 AACSQ86V21 672 aa11.89□□□□□ -0.51
PTPN20-202ENST00000374339 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-202ENST00000374339 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-202ENST00000374339 CCDC85AQ96PX6 553 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-202ENST00000374339 MPHOSPH8Q99549 860 aa11.89□□□□□ -0.51
PTPN20-202ENST00000374339 BACH2Q9BYV9 841 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms