RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 TAF5LO75529 589 aa9.19□□□□□ -0.94
HERC4-202ENST00000373700 NOL10Q9BSC4 688 aaKnown RBP9.19□□□□□ -0.94
HERC4-202ENST00000373700 ANTXR1Q9H6X2 564 aa9.19□□□□□ -0.94
HERC4-202ENST00000373700 ANKIB1Q9P2G1 1089 aa9.19□□□□□ -0.94
HERC4-202ENST00000373700 CDK11BP21127 795 aaKnown RBP9.19□□□□□ -0.94
HERC4-202ENST00000373700 ATP2B3Q16720 1220 aa9.19□□□□□ -0.94
HERC4-202ENST00000373700 NCBP3Q53F19 620 aaKnown RBP9.19□□□□□ -0.94
HERC4-202ENST00000373700 PLBD2Q8NHP8 589 aa9.19□□□□□ -0.94
HERC4-202ENST00000373700 EAF2Q96CJ1 260 aaPredicted RBP9.19□□□□□ -0.94
HERC4-202ENST00000373700 TEX13AQ9BXU3 409 aaPredicted RBP9.19□□□□□ -0.94
HERC4-202ENST00000373700 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.19□□□□□ -0.943e-7■■■□□ 18.5
HERC4-202ENST00000373700 TLR7Q9NYK1 1049 aaKnown RBP9.19□□□□□ -0.94
HERC4-202ENST00000373700 SYNE4Q8N205 404 aa9.19□□□□□ -0.94
HERC4-202ENST00000373700 SIGLEC1Q9BZZ2 1709 aa9.19□□□□□ -0.94
HERC4-202ENST00000373700 KRT32Q14532 448 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 NBPF5PQ86XG9 351 aaPredicted RBP9.18□□□□□ -0.94
HERC4-202ENST00000373700 HOMER1Q86YM7 354 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 ZNF652Q9Y2D9 606 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 WDR17Q8IZU2 1322 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 GNPATO15228 680 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 SMC2O95347 1197 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 ZSCAN22P10073 491 aaPredicted RBP9.18□□□□□ -0.94
HERC4-202ENST00000373700 RFC4P35249 363 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 TPD52L1Q16890 204 aaPredicted RBP9.18□□□□□ -0.94
HERC4-202ENST00000373700 GAS2L3Q86XJ1 694 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 AKAP2Q9Y2D5 859 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 ZBTB1Q9Y2K1 713 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 ATP2B2Q01814 1243 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 SAFBQ15424 915 aaKnown RBP eCLIP9.18□□□□□ -0.94
HERC4-202ENST00000373700 AK7Q96M32 723 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 NEK1Q96PY6 1258 aa9.18□□□□□ -0.94
HERC4-202ENST00000373700 A0A1B0GUL7 405 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 LETM1O95202 739 aaPredicted RBP9.17□□□□□ -0.94
HERC4-202ENST00000373700 POLR3DP05423 398 aaPredicted RBP9.17□□□□□ -0.94
HERC4-202ENST00000373700 SYT1P21579 422 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 MAP3K11Q16584 847 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 LRRC24Q50LG9 513 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 CCDC183Q5T5S1 534 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 PUS3Q9BZE2 481 aaKnown RBP9.17□□□□□ -0.94
HERC4-202ENST00000373700 SH2B1Q9NRF2 756 aaPredicted RBP9.17□□□□□ -0.94
HERC4-202ENST00000373700 HOXB7P09629 217 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 ISM2Q6H9L7 571 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 SEC62Q99442 399 aaKnown RBP9.17□□□□□ -0.94
HERC4-202ENST00000373700 U3KPZ7 1027 aaPredicted RBP9.17□□□□□ -0.94
HERC4-202ENST00000373700 SPATA31D1Q6ZQQ2 1576 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 POLR1AO95602 1720 aaPredicted RBP9.17□□□□□ -0.94
HERC4-202ENST00000373700 VPS53Q5VIR6 699 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 CREB3L3Q68CJ9 461 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 PIGBQ92521 554 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 RBSNQ9H1K0 784 aa9.17□□□□□ -0.94
HERC4-202ENST00000373700 OVOS2A0A0J9YW53 1432 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 OVOS2Q6IE36 1432 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 ITGA6P23229 1130 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 ANAPC15P60006 121 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 IMMTQ16891 758 aaKnown RBP9.16□□□□□ -0.94
HERC4-202ENST00000373700 MIGA1Q8NAN2 632 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 SSH3Q8TE77 659 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 CCDC34Q96HJ3 373 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 SNX14Q9Y5W7 946 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 SNAP23O00161 211 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 SGSM2O43147 1006 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 GADD45BO75293 160 aaPredicted RBP9.16□□□□□ -0.94
HERC4-202ENST00000373700 EPHA10Q5JZY3 1008 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 SLC9C2Q5TAH2 1124 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 PDILTQ8N807 584 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 GNL3LQ9NVN8 582 aaKnown RBP9.16□□□□□ -0.94
HERC4-202ENST00000373700 C1orf167Q5SNV9 1468 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 RIMS1Q86UR5 1692 aaKnown RBP9.16□□□□□ -0.94
HERC4-202ENST00000373700 C6orf229H3BNL8 230 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 BIN1O00499 593 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 IL15P40933 162 aaPredicted RBP9.16□□□□□ -0.94
HERC4-202ENST00000373700 ZNF396Q96N95 335 aaPredicted RBP9.16□□□□□ -0.94
HERC4-202ENST00000373700 CARD10Q9BWT7 1032 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 BABAM1Q9NWV8 329 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 USP21Q9UK80 565 aa9.16□□□□□ -0.94
HERC4-202ENST00000373700 ADCY5O95622 1261 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 SLFNL1Q499Z3 407 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 TNNI3KQ59H18 835 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 LRSAM1Q6UWE0 723 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 Q6ZUG5 572 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 NAPBQ9H115 298 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 PAG1Q9NWQ8 432 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 CFAP45Q9UL16 551 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 FPGT-TNNI3KV9GXZ4 949 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 ANKARQ7Z5J8 1434 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 UQCRHLA0A096LP55 91 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 MARCH6O60337 910 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 UQCRHP07919 91 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 SETDB2Q96T68 719 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 CDC42BPGQ6DT37 1551 aa9.15□□□□□ -0.94
HERC4-202ENST00000373700 USP31Q70CQ4 1352 aa9.15□□□□□ -0.95
HERC4-202ENST00000373700 ARHGEF28Q8N1W1 1705 aaKnown RBP9.15□□□□□ -0.95
HERC4-202ENST00000373700 RBM5P52756 815 aaKnown RBP eCLIP9.15□□□□□ -0.95
HERC4-202ENST00000373700 PTH1RQ03431 593 aa9.15□□□□□ -0.95
HERC4-202ENST00000373700 TTC12Q9H892 705 aaPredicted RBP9.15□□□□□ -0.95
HERC4-202ENST00000373700 CTNNA3Q9UI47 895 aa9.15□□□□□ -0.95
HERC4-202ENST00000373700 GOLGA8BA8MQT2 603 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 F13A1P00488 732 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 IGKV5-2P06315 115 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 SLC5A1P13866 664 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms