RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 BBOX1O75936 387 aa15.26■□□□□ 0.03
HDAC8-201ENST00000373554 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
HDAC8-201ENST00000373554 CCDC152Q4G0S7 254 aa15.26■□□□□ 0.03
HDAC8-201ENST00000373554 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
HDAC8-201ENST00000373554 SLC4A10Q6U841 1118 aa15.26■□□□□ 0.03
HDAC8-201ENST00000373554 OLFM4Q6UX06 510 aa15.26■□□□□ 0.03
HDAC8-201ENST00000373554 UBE3BQ7Z3V4 1068 aa15.26■□□□□ 0.03
HDAC8-201ENST00000373554 JARID2Q92833 1246 aaPredicted RBP15.26■□□□□ 0.03
HDAC8-201ENST00000373554 SBF1O95248 1867 aa15.25■□□□□ 0.03
HDAC8-201ENST00000373554 BEND3Q5T5X7 828 aa15.25■□□□□ 0.03
HDAC8-201ENST00000373554 TMC4Q7Z404 712 aa15.25■□□□□ 0.03
HDAC8-201ENST00000373554 ZNF526Q8TF50 670 aaPredicted RBP15.25■□□□□ 0.03
HDAC8-201ENST00000373554 ATP6V0A2Q9Y487 856 aa15.25■□□□□ 0.03
HDAC8-201ENST00000373554 TIAM2Q8IVF5 1701 aa15.25■□□□□ 0.03
HDAC8-201ENST00000373554 H7C1W4 665 aa15.24■□□□□ 0.03
HDAC8-201ENST00000373554 CTSWP56202 376 aa15.24■□□□□ 0.03
HDAC8-201ENST00000373554 SRCIN1Q9C0H9 1055 aa15.24■□□□□ 0.03
HDAC8-201ENST00000373554 GPBP1L1Q9HC44 474 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-201ENST00000373554 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
HDAC8-201ENST00000373554 ALDH1L1O75891 902 aa15.23■□□□□ 0.03
HDAC8-201ENST00000373554 PRELPP51888 382 aa15.23■□□□□ 0.03
HDAC8-201ENST00000373554 PSMD1Q99460 953 aa15.23■□□□□ 0.03
HDAC8-201ENST00000373554 KIF16BQ96L93 1317 aa15.22■□□□□ 0.03
HDAC8-201ENST00000373554 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
HDAC8-201ENST00000373554 SP8Q8IXZ3 490 aa15.22■□□□□ 0.03
HDAC8-201ENST00000373554 CELF1Q92879 486 aaKnown RBP15.22■□□□□ 0.03
HDAC8-201ENST00000373554 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-201ENST00000373554 KDM2BQ8NHM5 1336 aa15.21■□□□□ 0.03
HDAC8-201ENST00000373554 LRRC37AA6NMS7 1700 aa15.21■□□□□ 0.03
HDAC8-201ENST00000373554 GRM8O00222 908 aa15.21■□□□□ 0.03
HDAC8-201ENST00000373554 ZNF277Q9NRM2 450 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-201ENST00000373554 C9orf78Q9NZ63 289 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-201ENST00000373554 MYH3P11055 1940 aa15.21■□□□□ 0.02
HDAC8-201ENST00000373554 CCDC88AQ3V6T2 1871 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 IARSP41252 1262 aaKnown RBP15.2■□□□□ 0.02
HDAC8-201ENST00000373554 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-201ENST00000373554 CASP7P55210 303 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 RPS8P62241 208 aaKnown RBP15.2■□□□□ 0.02
HDAC8-201ENST00000373554 DPP8Q6V1X1 898 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-201ENST00000373554 SLC51AQ86UW1 340 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 SUPT20HQ8NEM7 779 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 TTLL11Q8NHH1 800 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
HDAC8-201ENST00000373554 PLA2G12BQ9BX93 195 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 SEC31BQ9NQW1 1179 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 TAF1P21675 1872 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 RTL9Q8NET4 1388 aa15.2■□□□□ 0.02
HDAC8-201ENST00000373554 DICER1Q9UPY3 1922 aaKnown RBP15.19■□□□□ 0.02
HDAC8-201ENST00000373554 ANKRD18AQ8IVF6 992 aa15.19■□□□□ 0.02
HDAC8-201ENST00000373554 MPNDQ8N594 471 aa15.19■□□□□ 0.02
HDAC8-201ENST00000373554 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
HDAC8-201ENST00000373554 NOB1Q9ULX3 412 aaKnown RBP15.19■□□□□ 0.02
HDAC8-201ENST00000373554 COL4A1P02462 1669 aa15.19■□□□□ 0.02
HDAC8-201ENST00000373554 JDP2Q8WYK2 163 aa15.18■□□□□ 0.02
HDAC8-201ENST00000373554 GREM2Q9H772 168 aa15.18■□□□□ 0.02
HDAC8-201ENST00000373554 GLTPD2A6NH11 291 aa15.17■□□□□ 0.02
HDAC8-201ENST00000373554 CCT4P50991 539 aaKnown RBP15.17■□□□□ 0.02
HDAC8-201ENST00000373554 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
HDAC8-201ENST00000373554 DPY19L2Q6NUT2 758 aa15.17■□□□□ 0.02
HDAC8-201ENST00000373554 LARGE2Q8N3Y3 721 aa15.17■□□□□ 0.02
HDAC8-201ENST00000373554 RTFDC1Q9BY42 306 aaPredicted RBP15.17■□□□□ 0.02
HDAC8-201ENST00000373554 VPS33BQ9H267 617 aa15.17■□□□□ 0.02
HDAC8-201ENST00000373554 NSFL1CQ9UNZ2 370 aaKnown RBP15.17■□□□□ 0.02
HDAC8-201ENST00000373554 DUOX1Q9NRD9 1551 aa15.16■□□□□ 0.02
HDAC8-201ENST00000373554 IPO8O15397 1037 aaKnown RBP15.16■□□□□ 0.02
HDAC8-201ENST00000373554 PPIP5K2O43314 1243 aa15.16■□□□□ 0.02
HDAC8-201ENST00000373554 CSF1RP07333 972 aa15.16■□□□□ 0.02
HDAC8-201ENST00000373554 ITGA6P23229 1130 aa15.16■□□□□ 0.02
HDAC8-201ENST00000373554 ARHGAP45Q92619 1136 aa15.16■□□□□ 0.02
HDAC8-201ENST00000373554 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
HDAC8-201ENST00000373554 IGHMBP2P38935 993 aaKnown RBP15.15■□□□□ 0.02
HDAC8-201ENST00000373554 AOC3Q16853 763 aa15.15■□□□□ 0.02
HDAC8-201ENST00000373554 NIM1KQ8IY84 436 aa15.15■□□□□ 0.02
HDAC8-201ENST00000373554 NMRK2Q9NPI5 230 aa15.15■□□□□ 0.02
HDAC8-201ENST00000373554 CHMP3Q9Y3E7 222 aa15.15■□□□□ 0.02
HDAC8-201ENST00000373554 UTYO14607 1347 aa15.15■□□□□ 0.02
HDAC8-201ENST00000373554 ANKRD18BA2A2Z9 1011 aa15.14■□□□□ 0.01
HDAC8-201ENST00000373554 BCAR3O75815 825 aa15.14■□□□□ 0.01
HDAC8-201ENST00000373554 GPSM2P81274 684 aa15.14■□□□□ 0.01
HDAC8-201ENST00000373554 FOXO4P98177 505 aa15.14■□□□□ 0.01
HDAC8-201ENST00000373554 IFIT5Q13325 482 aaKnown RBP15.14■□□□□ 0.01
HDAC8-201ENST00000373554 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
HDAC8-201ENST00000373554 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
HDAC8-201ENST00000373554 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
HDAC8-201ENST00000373554 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
HDAC8-201ENST00000373554 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
HDAC8-201ENST00000373554 COL4A5P29400 1685 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 C6orf229H3BNL8 230 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 FZD9O00144 591 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 EIF6P56537 245 aaKnown RBP15.13■□□□□ 0.01
HDAC8-201ENST00000373554 KIAA2012Q0VF49 1180 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 LMBR1LQ6UX01 489 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 EYA3Q99504 573 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 PODXL2Q9NZ53 605 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 XDHP47989 1333 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 ZNF541Q9H0D2 1346 aa15.13■□□□□ 0.01
HDAC8-201ENST00000373554 KIF3CO14782 793 aa15.12■□□□□ 0.01
HDAC8-201ENST00000373554 CAPN15O75808 1086 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms