RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 ALDH1L1O75891 902 aa23.2■■□□□ 1.3
PBX3-205ENST00000373492 SF3B3Q15393 1217 aaKnown RBP23.2■■□□□ 1.3
PBX3-205ENST00000373492 GRIPAP1Q4V328 841 aa23.2■■□□□ 1.3
PBX3-205ENST00000373492 RCAN3Q9UKA8 241 aa23.2■■□□□ 1.3
PBX3-205ENST00000373492 SBF1O95248 1867 aa23.19■■□□□ 1.3
PBX3-205ENST00000373492 FER1L6Q2WGJ9 1857 aa23.19■■□□□ 1.3
PBX3-205ENST00000373492 PRELPP51888 382 aa23.19■■□□□ 1.3
PBX3-205ENST00000373492 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
PBX3-205ENST00000373492 ABCC4O15439 1325 aa23.18■■□□□ 1.3
PBX3-205ENST00000373492 CDHR2Q9BYE9 1310 aa23.18■■□□□ 1.3
PBX3-205ENST00000373492 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
PBX3-205ENST00000373492 PPEF1O14829 653 aaPredicted RBP23.18■■□□□ 1.3
PBX3-205ENST00000373492 BBOX1O75936 387 aa23.18■■□□□ 1.3
PBX3-205ENST00000373492 ZKSCAN2Q63HK3 967 aa23.18■■□□□ 1.3
PBX3-205ENST00000373492 ATF7IPQ6VMQ6 1270 aa23.18■■□□□ 1.3
PBX3-205ENST00000373492 GPBP1L1Q9HC44 474 aaPredicted RBP23.18■■□□□ 1.3
PBX3-205ENST00000373492 CCDC88AQ3V6T2 1871 aa23.17■■□□□ 1.3
PBX3-205ENST00000373492 FKBP4Q02790 459 aaKnown RBP eCLIP23.17■■□□□ 1.3
PBX3-205ENST00000373492 CCT4P50991 539 aaKnown RBP23.16■■□□□ 1.3
PBX3-205ENST00000373492 GRAPQ13588 217 aa23.16■■□□□ 1.3
PBX3-205ENST00000373492 OLFM4Q6UX06 510 aa23.16■■□□□ 1.3
PBX3-205ENST00000373492 UBE3BQ7Z3V4 1068 aa23.16■■□□□ 1.3
PBX3-205ENST00000373492 GRAPLQ8TC17 118 aaPredicted RBP23.16■■□□□ 1.3
PBX3-205ENST00000373492 TMX4Q9H1E5 349 aaPredicted RBP23.16■■□□□ 1.3
PBX3-205ENST00000373492 C9orf78Q9NZ63 289 aaPredicted RBP23.16■■□□□ 1.3
PBX3-205ENST00000373492 H7C1W4 665 aa23.15■■□□□ 1.3
PBX3-205ENST00000373492 PDE8AO60658 829 aa23.15■■□□□ 1.3
PBX3-205ENST00000373492 JARID2Q92833 1246 aaPredicted RBP23.15■■□□□ 1.3
PBX3-205ENST00000373492 PSMD1Q99460 953 aa23.15■■□□□ 1.3
PBX3-205ENST00000373492 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
PBX3-205ENST00000373492 TRIM27P14373 513 aa23.14■■□□□ 1.29
PBX3-205ENST00000373492 TMC4Q7Z404 712 aa23.14■■□□□ 1.29
PBX3-205ENST00000373492 ZNF526Q8TF50 670 aaPredicted RBP23.14■■□□□ 1.29
PBX3-205ENST00000373492 SNED1Q8TER0 1413 aa23.14■■□□□ 1.29
PBX3-205ENST00000373492 GRM8O00222 908 aa23.13■■□□□ 1.29
PBX3-205ENST00000373492 SP8Q8IXZ3 490 aa23.12■■□□□ 1.29
PBX3-205ENST00000373492 FTSJ3Q8IY81 847 aaKnown RBP23.12■■□□□ 1.29
PBX3-205ENST00000373492 KDM2BQ8NHM5 1336 aa23.11■■□□□ 1.29
PBX3-205ENST00000373492 CCDC152Q4G0S7 254 aa23.11■■□□□ 1.29
PBX3-205ENST00000373492 CLUAP1Q96AJ1 413 aa23.11■■□□□ 1.29
PBX3-205ENST00000373492 MS4A1P11836 297 aa23.1■■□□□ 1.29
PBX3-205ENST00000373492 CASP7P55210 303 aa23.1■■□□□ 1.29
PBX3-205ENST00000373492 INTS3Q68E01 1043 aaKnown RBP23.1■■□□□ 1.29
PBX3-205ENST00000373492 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.1■■□□□ 1.29
PBX3-205ENST00000373492 ZNF277Q9NRM2 450 aaPredicted RBP23.1■■□□□ 1.29
PBX3-205ENST00000373492 DZIP1LQ8IYY4 767 aaKnown RBP23.09■■□□□ 1.29
PBX3-205ENST00000373492 PLA2G12BQ9BX93 195 aa23.09■■□□□ 1.29
PBX3-205ENST00000373492 GLTPD2A6NH11 291 aa23.08■■□□□ 1.29
PBX3-205ENST00000373492 IARSP41252 1262 aaKnown RBP23.08■■□□□ 1.29
PBX3-205ENST00000373492 CTSWP56202 376 aa23.08■■□□□ 1.29
PBX3-205ENST00000373492 CELF1Q92879 486 aaKnown RBP23.08■■□□□ 1.29
PBX3-205ENST00000373492 DICER1Q9UPY3 1922 aaKnown RBP23.08■■□□□ 1.28
PBX3-205ENST00000373492 UTYO14607 1347 aa23.08■■□□□ 1.28
PBX3-205ENST00000373492 RPS8P62241 208 aaKnown RBP23.07■■□□□ 1.28
PBX3-205ENST00000373492 DPY19L2Q6NUT2 758 aa23.07■■□□□ 1.28
PBX3-205ENST00000373492 VPS33BQ9H267 617 aa23.07■■□□□ 1.28
PBX3-205ENST00000373492 TNNQ9UQP3 1299 aa23.07■■□□□ 1.28
PBX3-205ENST00000373492 NBPF7P0C2Y1 421 aaPredicted RBP23.06■■□□□ 1.28
PBX3-205ENST00000373492 SUPT20HQ8NEM7 779 aa23.06■■□□□ 1.28
PBX3-205ENST00000373492 RTFDC1Q9BY42 306 aaPredicted RBP23.06■■□□□ 1.28
PBX3-205ENST00000373492 USP44Q9H0E7 712 aa23.06■■□□□ 1.28
PBX3-205ENST00000373492 HDAC5Q9UQL6 1122 aa23.06■■□□□ 1.28
PBX3-205ENST00000373492 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
PBX3-205ENST00000373492 TIAM2Q8IVF5 1701 aa23.05■■□□□ 1.28
PBX3-205ENST00000373492 DPP8Q6V1X1 898 aaPredicted RBP23.05■■□□□ 1.28
PBX3-205ENST00000373492 SLC51AQ86UW1 340 aa23.05■■□□□ 1.28
PBX3-205ENST00000373492 MPNDQ8N594 471 aa23.05■■□□□ 1.28
PBX3-205ENST00000373492 TTLL11Q8NHH1 800 aa23.05■■□□□ 1.28
PBX3-205ENST00000373492 SEC31BQ9NQW1 1179 aa23.05■■□□□ 1.28
PBX3-205ENST00000373492 KIF3CO14782 793 aa23.04■■□□□ 1.28
PBX3-205ENST00000373492 UBTFL1P0CB47 393 aaPredicted RBP23.04■■□□□ 1.28
PBX3-205ENST00000373492 TMEM57Q8N5G2 664 aa23.04■■□□□ 1.28
PBX3-205ENST00000373492 RTL9Q8NET4 1388 aa23.03■■□□□ 1.28
PBX3-205ENST00000373492 JDP2Q8WYK2 163 aa23.03■■□□□ 1.28
PBX3-205ENST00000373492 CCDC85AQ96PX6 553 aaPredicted RBP23.03■■□□□ 1.28
PBX3-205ENST00000373492 NMRK2Q9NPI5 230 aa23.03■■□□□ 1.28
PBX3-205ENST00000373492 GNAI3P08754 354 aa23.02■■□□□ 1.28
PBX3-205ENST00000373492 ITPRIPQ8IWB1 547 aa23.02■■□□□ 1.28
PBX3-205ENST00000373492 SUCLG2Q96I99 432 aa23.02■■□□□ 1.28
PBX3-205ENST00000373492 CDC5LQ99459 802 aaKnown RBP23.02■■□□□ 1.28
PBX3-205ENST00000373492 FZD9O00144 591 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 PLIN1O60240 522 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 CSF1RP07333 972 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 C1QTNF8P60827 252 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 FOXO4P98177 505 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 ANKRD18AQ8IVF6 992 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 LARGE2Q8N3Y3 721 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 CHMP3Q9Y3E7 222 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 A0A1B0GUL6 1792 aa23.01■■□□□ 1.27
PBX3-205ENST00000373492 RLBP1P12271 317 aa23■■□□□ 1.27
PBX3-205ENST00000373492 LMBR1LQ6UX01 489 aa23■■□□□ 1.27
PBX3-205ENST00000373492 GREM2Q9H772 168 aa23■■□□□ 1.27
PBX3-205ENST00000373492 RRAGCQ9HB90 399 aa23■■□□□ 1.27
PBX3-205ENST00000373492 COL4A1P02462 1669 aa23■■□□□ 1.27
PBX3-205ENST00000373492 PPIP5K2O43314 1243 aa22.99■■□□□ 1.27
PBX3-205ENST00000373492 PANK1Q8TE04 598 aa22.99■■□□□ 1.27
PBX3-205ENST00000373492 MEIS3Q99687 375 aa22.99■■□□□ 1.27
PBX3-205ENST00000373492 NSFL1CQ9UNZ2 370 aaKnown RBP22.99■■□□□ 1.27
PBX3-205ENST00000373492 ANKRD18BA2A2Z9 1011 aa22.98■■□□□ 1.27
PBX3-205ENST00000373492 VEGFAP15692 232 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms