RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
TRAPPC3-201ENST00000373159 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-201ENST00000373159 GRAPQ13588 217 aa17.12■□□□□ 0.33
TRAPPC3-201ENST00000373159 TNIP1Q15025 636 aa17.12■□□□□ 0.33
TRAPPC3-201ENST00000373159 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
TRAPPC3-201ENST00000373159 GRAPLQ8TC17 118 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-201ENST00000373159 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-201ENST00000373159 NECTIN2Q92692 538 aa17.12■□□□□ 0.33
TRAPPC3-201ENST00000373159 MAP2K2P36507 400 aa17.11■□□□□ 0.33
TRAPPC3-201ENST00000373159 CYP4F22Q6NT55 531 aa17.11■□□□□ 0.33
TRAPPC3-201ENST00000373159 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
TRAPPC3-201ENST00000373159 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-201ENST00000373159 SAPCD2Q86UD0 394 aa17.1■□□□□ 0.33
TRAPPC3-201ENST00000373159 BEGAINQ9BUH8 593 aa17.1■□□□□ 0.33
TRAPPC3-201ENST00000373159 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
TRAPPC3-201ENST00000373159 RAD17O75943 681 aa17.09■□□□□ 0.33
TRAPPC3-201ENST00000373159 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-201ENST00000373159 HIRAP54198 1017 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-201ENST00000373159 KRT24Q2M2I5 525 aa17.09■□□□□ 0.33
TRAPPC3-201ENST00000373159 PLBD2Q8NHP8 589 aa17.09■□□□□ 0.33
TRAPPC3-201ENST00000373159 ABHD8Q96I13 439 aa17.09■□□□□ 0.33
TRAPPC3-201ENST00000373159 HHIPL1Q96JK4 782 aa17.09■□□□□ 0.33
TRAPPC3-201ENST00000373159 YDJCA8MPS7 323 aa17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 HOXB7P09629 217 aa17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 GRM1Q13255 1194 aa17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 CDC37L1Q7L3B6 337 aa17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 TRIM35Q9UPQ4 493 aa17.08■□□□□ 0.32
TRAPPC3-201ENST00000373159 H7C1D1 291 aa17.07■□□□□ 0.32
TRAPPC3-201ENST00000373159 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
TRAPPC3-201ENST00000373159 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
TRAPPC3-201ENST00000373159 DBF4Q9UBU7 674 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-201ENST00000373159 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-201ENST00000373159 HDGFL1Q5TGJ6 251 aa17.06■□□□□ 0.32
TRAPPC3-201ENST00000373159 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
TRAPPC3-201ENST00000373159 DPF2Q92785 391 aa17.06■□□□□ 0.32
TRAPPC3-201ENST00000373159 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-201ENST00000373159 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
TRAPPC3-201ENST00000373159 AOC2O75106 756 aa17.05■□□□□ 0.32
TRAPPC3-201ENST00000373159 WASHC4Q2M389 1173 aa17.05■□□□□ 0.32
TRAPPC3-201ENST00000373159 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
TRAPPC3-201ENST00000373159 FAM89AQ96GI7 184 aa17.05■□□□□ 0.32
TRAPPC3-201ENST00000373159 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
TRAPPC3-201ENST00000373159 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
TRAPPC3-201ENST00000373159 CA12O43570 354 aa17.04■□□□□ 0.32
TRAPPC3-201ENST00000373159 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
TRAPPC3-201ENST00000373159 CELF1Q92879 486 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-201ENST00000373159 CFAP44Q96MT7 982 aa17.04■□□□□ 0.32
TRAPPC3-201ENST00000373159 ANKRD36CQ5JPF3 1778 aa17.03■□□□□ 0.32
TRAPPC3-201ENST00000373159 SHTN1A0MZ66 631 aa17.03■□□□□ 0.32
TRAPPC3-201ENST00000373159 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
TRAPPC3-201ENST00000373159 ZNF428Q96B54 188 aa17.03■□□□□ 0.32
TRAPPC3-201ENST00000373159 POLLQ9UGP5 575 aa17.03■□□□□ 0.32
TRAPPC3-201ENST00000373159 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-201ENST00000373159 TRPM7Q96QT4 1865 aa17.03■□□□□ 0.32
TRAPPC3-201ENST00000373159 PSMD14O00487 310 aa17.02■□□□□ 0.32
TRAPPC3-201ENST00000373159 BRPF1P55201 1214 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-201ENST00000373159 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRAPPC3-201ENST00000373159 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
TRAPPC3-201ENST00000373159 USP48Q86UV5 1035 aa17.02■□□□□ 0.32
TRAPPC3-201ENST00000373159 ZNF408Q9H9D4 720 aa17.02■□□□□ 0.32
TRAPPC3-201ENST00000373159 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
TRAPPC3-201ENST00000373159 THSD7BQ9C0I4 1608 aa17.02■□□□□ 0.31
TRAPPC3-201ENST00000373159 C6orf229H3BNL8 230 aa17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 IRS4O14654 1257 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 RIMBP2O15034 1052 aa17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 RPS8P62241 208 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 GPSM2P81274 684 aa17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 DDX10Q13206 875 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 EYA3Q99504 573 aa17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 DBNDD1Q9H9R9 158 aa17.01■□□□□ 0.31
TRAPPC3-201ENST00000373159 SAMD7Q7Z3H4 446 aa17■□□□□ 0.31
TRAPPC3-201ENST00000373159 TSKSQ9UJT2 592 aa17■□□□□ 0.31
TRAPPC3-201ENST00000373159 LAMB2P55268 1798 aa17■□□□□ 0.31
TRAPPC3-201ENST00000373159 DUOX1Q9NRD9 1551 aa16.99■□□□□ 0.31
TRAPPC3-201ENST00000373159 ZNF853P0CG23 659 aa16.99■□□□□ 0.31
TRAPPC3-201ENST00000373159 NOGQ13253 232 aa16.99■□□□□ 0.31
TRAPPC3-201ENST00000373159 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC3-201ENST00000373159 TBC1D16Q8TBP0 767 aa16.99■□□□□ 0.31
TRAPPC3-201ENST00000373159 KCNQ5Q9NR82 932 aa16.99■□□□□ 0.31
TRAPPC3-201ENST00000373159 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
TRAPPC3-201ENST00000373159 PODXL2Q9NZ53 605 aa16.99■□□□□ 0.31
TRAPPC3-201ENST00000373159 ECE2O60344 883 aa16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 RGS19P49795 217 aa16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 HUNKP57058 714 aa16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 DOK7Q18PE1 504 aa16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 TBC1D10BQ4KMP7 808 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 KRT26Q7Z3Y9 468 aa16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 ZBTB38Q8NAP3 1195 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC3-201ENST00000373159 CCDC85CA6NKD9 419 aa16.97■□□□□ 0.31
TRAPPC3-201ENST00000373159 EGFRP00533 1210 aa16.97■□□□□ 0.31
TRAPPC3-201ENST00000373159 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms