RNA–Protein interactions for RNA: ENST00000372890.5

TRUB2-201, Transcript of TruB pseudouridine synthase family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB2, Length 5,719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2-201ENST00000372890 NEDD9Q14511 834 aa13.77□□□□□ -0.21
TRUB2-201ENST00000372890 N4BP3O15049 544 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 GMNNO75496 209 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 BAG4O95429 457 aaKnown RBP13.76□□□□□ -0.21
TRUB2-201ENST00000372890 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
TRUB2-201ENST00000372890 ZSCAN16Q9H4T2 348 aaPredicted RBP13.76□□□□□ -0.21
TRUB2-201ENST00000372890 PCF11O94913 1555 aaKnown RBP13.76□□□□□ -0.21
TRUB2-201ENST00000372890 KRT86O43790 486 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 CFAP58Q5T655 872 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 CEP128Q6ZU80 1094 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 PHLDB2Q86SQ0 1253 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 CROCCP2Q86T23 111 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 KIF1BPQ96EK5 621 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 CALML4Q96GE6 196 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 MTRF1LQ9UGC7 380 aaKnown RBP13.76□□□□□ -0.21
TRUB2-201ENST00000372890 A0A087WZG4 1122 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 PRC1O43663 620 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 BCAR3O75815 825 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 CCDC38Q502W7 563 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 ARHGAP24Q8N264 748 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
TRUB2-201ENST00000372890 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
TRUB2-201ENST00000372890 SRGAP3O43295 1099 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 PRKAR2BP31323 418 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 INPP5BP32019 993 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 UBASH3AP57075 661 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 WHAMMP3Q1A5X7 153 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 ZSCAN23Q3MJ62 389 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 SELENOSQ9BQE4 189 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 TBC1D2Q9BYX2 928 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 BMP15O95972 392 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 ATP2A2P16615 1042 aaKnown RBP13.75□□□□□ -0.21
TRUB2-201ENST00000372890 MAP7Q14244 749 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 TBC1D5Q92609 795 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 TMX1Q9H3N1 280 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRUB2-201ENST00000372890 NDC80O14777 642 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 STX6O43752 255 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 ARID4AP29374 1257 aaPredicted RBP13.75□□□□□ -0.21
TRUB2-201ENST00000372890 ERCC6LQ2NKX8 1250 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 SEPT14Q6ZU15 432 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 SPAG5Q96R06 1193 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 EHMT1Q9H9B1 1298 aa13.75□□□□□ -0.21
TRUB2-201ENST00000372890 MAP2K2P36507 400 aa13.74□□□□□ -0.21
TRUB2-201ENST00000372890 CCDC194A0A1B0GVG4 234 aa13.74□□□□□ -0.21
TRUB2-201ENST00000372890 BUB1BO60566 1050 aaPredicted RBP13.74□□□□□ -0.21
TRUB2-201ENST00000372890 MX1P20591 662 aa13.74□□□□□ -0.21
TRUB2-201ENST00000372890 FKBP4Q02790 459 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRUB2-201ENST00000372890 USP37Q86T82 979 aa13.74□□□□□ -0.21
TRUB2-201ENST00000372890 MYO1BO43795 1136 aa13.74□□□□□ -0.21
TRUB2-201ENST00000372890 UBA5Q9GZZ9 404 aa13.74□□□□□ -0.21
TRUB2-201ENST00000372890 ZEB2O60315 1214 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 TNNC1P63316 161 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 ZNF530Q6P9A1 599 aaPredicted RBP13.73□□□□□ -0.21
TRUB2-201ENST00000372890 GGNBP2Q9H3C7 697 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 RNF41Q9H4P4 317 aaPredicted RBP13.73□□□□□ -0.21
TRUB2-201ENST00000372890 SSRP1Q08945 709 aaKnown RBP13.73□□□□□ -0.21
TRUB2-201ENST00000372890 AP1ARQ63HQ0 302 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 KRBA2Q6ZNG9 492 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 NKIRAS1Q9NYS0 192 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 UBAP1LF5GYI3 381 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 TERF1P54274 439 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 PRPF40BQ6NWY9 871 aaKnown RBP13.73□□□□□ -0.21
TRUB2-201ENST00000372890 ZNF365Q70YC5 407 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 ERO1AQ96HE7 468 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 MYCBPQ99417 103 aaPredicted RBP13.73□□□□□ -0.21
TRUB2-201ENST00000372890 SEC62Q99442 399 aaKnown RBP13.73□□□□□ -0.21
TRUB2-201ENST00000372890 KIF5AQ12840 1032 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 PLCD3Q8N3E9 789 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
TRUB2-201ENST00000372890 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
TRUB2-201ENST00000372890 CCDC186Q7Z3E2 898 aa13.72□□□□□ -0.21
TRUB2-201ENST00000372890 NUF2Q9BZD4 464 aa13.72□□□□□ -0.21
TRUB2-201ENST00000372890 CUL7Q14999 1698 aa13.72□□□□□ -0.21
TRUB2-201ENST00000372890 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
TRUB2-201ENST00000372890 KIAA1107Q9UPP5 1409 aa13.72□□□□□ -0.21
TRUB2-201ENST00000372890 MGEA5O60502 916 aa13.71□□□□□ -0.21
TRUB2-201ENST00000372890 TCERG1LQ5VWI1 586 aa13.71□□□□□ -0.21
TRUB2-201ENST00000372890 SMC1BQ8NDV3 1235 aa13.71□□□□□ -0.21
TRUB2-201ENST00000372890 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.21
TRUB2-201ENST00000372890 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
TRUB2-201ENST00000372890 CDK13Q14004 1512 aaKnown RBP13.71□□□□□ -0.21
TRUB2-201ENST00000372890 PPFIA2O75334 1257 aa13.71□□□□□ -0.21
TRUB2-201ENST00000372890 USP5P45974 858 aa13.71□□□□□ -0.21
TRUB2-201ENST00000372890 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
TRUB2-201ENST00000372890 PPM1FP49593 454 aaPredicted RBP13.71□□□□□ -0.22
TRUB2-201ENST00000372890 FYB2Q5VWT5 728 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 PPP1R12CQ9BZL4 782 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 SIL1Q9H173 461 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 IQGAP2Q13576 1575 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 CCDC14Q49A88 953 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 CFAP157Q5JU67 520 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 IQCA1Q86XH1 822 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 CCDC63Q8NA47 563 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 TRIM47Q96LD4 638 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 SLC12A7Q9Y666 1083 aa13.71□□□□□ -0.22
TRUB2-201ENST00000372890 SUPT6HQ7KZ85 1726 aaKnown RBP13.7□□□□□ -0.22
TRUB2-201ENST00000372890 NDUFAB1O14561 156 aa13.7□□□□□ -0.22
TRUB2-201ENST00000372890 BEGAINQ9BUH8 593 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms