RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PTPRCP08575 1304 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 PPFIBP2Q8ND30 876 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 NLRP3Q96P20 1036 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 ZNF853P0CG23 659 aa16.14■□□□□ 0.18
RAPGEF1-202ENST00000372190 GRIPAP1Q4V328 841 aa16.14■□□□□ 0.18
RAPGEF1-202ENST00000372190 ANKRD13DQ6ZTN6 518 aa16.14■□□□□ 0.18
RAPGEF1-202ENST00000372190 MYCBPQ99417 103 aaPredicted RBP16.14■□□□□ 0.18
RAPGEF1-202ENST00000372190 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 CCDC94Q9BW85 323 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 EBAG9O00559 213 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 EIF4A2Q14240 407 aaKnown RBP16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 GSTTP1A0A1W2PQM5 241 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 FERP16591 822 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 KRT85P78386 507 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 ANKS4BQ8N8V4 417 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 NAA15Q9BXJ9 866 aaKnown RBP16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 FAM114A2Q9NRY5 505 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 HDAC9Q9UKV0 1011 aa16.14■□□□□ 0.17
RAPGEF1-202ENST00000372190 PAFAH1B1P43034 410 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 SH2D4BQ5SQS7 431 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 SSH1Q8WYL5 1049 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 PRAG1Q86YV5 1406 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 UBE3BQ7Z3V4 1068 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 DZIP3Q86Y13 1208 aaKnown RBP16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 CDKL5O76039 1030 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 LDHCP07864 332 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 PIBF1Q8WXW3 757 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 NEMFO60524 1076 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 TARBP1Q13395 1621 aaKnown RBP16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 VGLL3A8MV65 326 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 NAPBQ9H115 298 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 MBIPQ9NS73 344 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 PAXBP1Q9Y5B6 917 aa16.13■□□□□ 0.17
RAPGEF1-202ENST00000372190 SPTY2D1Q68D10 685 aaPredicted RBP16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 ANAPC4Q9UJX5 808 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 ARHGEF10O15013 1369 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 KIF20AO95235 890 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 DESP17661 470 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 HSF2BPO75031 334 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 DRC1Q96MC2 740 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 TAOK3Q9H2K8 898 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 CHD1O14646 1710 aa16.12■□□□□ 0.17
RAPGEF1-202ENST00000372190 NEBLO76041 1014 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 SPA17Q15506 151 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 ZNF397Q8NF99 534 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 NUP62CLQ9H1M0 184 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 SEC63Q9UGP8 760 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 GNPATO15228 680 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 GLRX3O76003 335 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 HOXC9P31274 260 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 SH3BGRP55822 239 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 MAATS1Q7Z4T9 603 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 NFATC2IPQ8NCF5 419 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 CCDC8Q9H0W5 538 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 STIM2Q9P246 746 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 CCNL1Q9UK58 526 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 PI4KAP2A4QPH2 592 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 GRM1Q13255 1194 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 PI4KAP1Q8N8J0 262 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 IP6K1Q92551 441 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 RALGAPBQ86X10 1494 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 KRT32Q14532 448 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 TMEM2Q9UHN6 1383 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 WHAMMQ8TF30 809 aa16.11■□□□□ 0.17
RAPGEF1-202ENST00000372190 CCDC96Q2M329 555 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 XAGE3Q8WTP9 111 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 SRRTQ9BXP5 876 aaKnown RBP16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 KIF4AO95239 1232 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 ANXA1P04083 346 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 CHPF2Q9P2E5 772 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 BAG3O95817 575 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 PDE1CQ14123 709 aaPredicted RBP16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 JARID2Q92833 1246 aaPredicted RBP16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 MX1P20591 662 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 MXRA7P84157 204 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 CCDC114Q96M63 670 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 CASQ2O14958 399 aaPredicted RBP16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 CAPN2P17655 700 aa16.1■□□□□ 0.17
RAPGEF1-202ENST00000372190 DNMT1P26358 1616 aaKnown RBP16.09■□□□□ 0.17
RAPGEF1-202ENST00000372190 STMN1P16949 149 aa16.09■□□□□ 0.17
RAPGEF1-202ENST00000372190 MAP2K2P36507 400 aa16.09■□□□□ 0.17
RAPGEF1-202ENST00000372190 LARP1BQ659C4 914 aaKnown RBP16.09■□□□□ 0.17
RAPGEF1-202ENST00000372190 HOOK3Q86VS8 718 aa16.09■□□□□ 0.17
RAPGEF1-202ENST00000372190 ZHX3Q9H4I2 956 aa16.09■□□□□ 0.17
RAPGEF1-202ENST00000372190 FSD2A1L4K1 749 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms