RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 C8orf58Q8NAV2 365 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 TNPO1Q92973 898 aaKnown RBP15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 COL17A1Q9UMD9 1497 aaPredicted RBP15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 CCDC83Q8IWF9 413 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 RNF168Q8IYW5 571 aaPredicted RBP15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 TESK2Q96S53 571 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 SSRP1Q08945 709 aaKnown RBP15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 LMBR1LQ6UX01 489 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 OGFOD1Q8N543 542 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 KIF18AQ8NI77 898 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 CCNL1Q9UK58 526 aaPredicted RBP15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 GOLGA8BA8MQT2 603 aa15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
RAPGEF1-201ENST00000372189 ZHX1Q9UKY1 873 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 SBNO1A3KN83 1393 aa15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 TSPY2A6NKD2 308 aa15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 GIGYF2Q6Y7W6 1299 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 CCDC148Q8NFR7 591 aa15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 USP21Q9UK80 565 aa15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 SFPQP23246 707 aaKnown RBP eCLIP15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 MRPL50Q8N5N7 158 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.36■□□□□ 0.05
RAPGEF1-201ENST00000372189 IL15P40933 162 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 CHMP4BP1P59074 171 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 MFSD6Q6ZSS7 791 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 CAMK4Q16566 473 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 FAM98CQ17RN3 349 aaKnown RBP15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 RHPN1Q8TCX5 695 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 CARD14Q9BXL6 1004 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 SH2B1Q9NRF2 756 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 ANO10Q9NW15 660 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 SSFA2P28290 1259 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 ARHGAP29Q52LW3 1261 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 SHTN1A0MZ66 631 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 IRS4O14654 1257 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 CFAP100Q494V2 611 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 PPP4R3AQ6IN85 833 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 SCLT1Q96NL6 688 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 PRDM10Q9NQV6 1147 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 YEATS2Q9ULM3 1422 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 F8W031 263 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 KIF5BP33176 963 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 SLC4A8Q2Y0W8 1093 aa15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 SCAND2PQ9GZW5 306 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF1-201ENST00000372189 NF2P35240 595 aa15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 BANK1Q8NDB2 785 aa15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 DDX17Q92841 729 aaKnown RBP15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 CYP7A1P22680 504 aa15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 MEIS3Q99687 375 aa15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 PHAXQ9H814 394 aaKnown RBP15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 PARD3Q8TEW0 1356 aa15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 NLRP5P59047 1200 aa15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 C8orf76Q96K31 380 aa15.34■□□□□ 0.05
RAPGEF1-201ENST00000372189 NEMFO60524 1076 aa15.33■□□□□ 0.05
RAPGEF1-201ENST00000372189 IBSPP21815 317 aaPredicted RBP15.33■□□□□ 0.05
RAPGEF1-201ENST00000372189 TMEM67Q5HYA8 995 aa15.33■□□□□ 0.05
RAPGEF1-201ENST00000372189 JDP2Q8WYK2 163 aa15.33■□□□□ 0.05
RAPGEF1-201ENST00000372189 LINS1Q8NG48 757 aa15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 ZC3H12CQ9C0D7 883 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 PIK3C2GO75747 1445 aa15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 CASQ1P31415 396 aa15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 CCDC12Q8WUD4 166 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 ZFYP08048 801 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 EYA3Q99504 573 aa15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 ANKRD2Q9GZV1 360 aa15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF1-201ENST00000372189 SEPT7Q16181 437 aaKnown RBP15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 CFAP57Q96MR6 1250 aa15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 CRACR2AQ9BSW2 395 aa15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 CLIP2Q9UDT6 1046 aa15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 RAB34Q9BZG1 259 aa15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 CCDC194A0A1B0GVG4 234 aa15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 TMEM266Q2M3C6 531 aa15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 MICALCLQ6ZW33 695 aa15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 MCM3P25205 808 aa15.32■□□□□ 0.04
RAPGEF1-201ENST00000372189 DYNC1I1O14576 645 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 MAP9Q49MG5 647 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 NCOA7Q8NI08 942 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 CTAGE5O15320 804 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 LTKP29376 864 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 NAA16Q6N069 864 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 HAND2P61296 217 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 ADGBQ8N7X0 1667 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 SOS1Q07889 1333 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 C16orf71Q8IYS4 520 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 WWC3Q9ULE0 1092 aa15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 NSFL1CQ9UNZ2 370 aaKnown RBP15.31■□□□□ 0.04
RAPGEF1-201ENST00000372189 ARHGEF5Q12774 1597 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 CNPY4Q8N129 248 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 SLC4A4Q9Y6R1 1079 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 245.3 ms