RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 CIAO1O76071 339 aa15.83■□□□□ 0.12
LDB3-203ENST00000372056 PI4K2BQ8TCG2 481 aa15.83■□□□□ 0.12
LDB3-203ENST00000372056 USP26Q9BXU7 913 aa15.83■□□□□ 0.12
LDB3-203ENST00000372056 TNS1Q9HBL0 1735 aaKnown RBP15.83■□□□□ 0.12
LDB3-203ENST00000372056 IFIT5Q13325 482 aaKnown RBP15.82■□□□□ 0.12
LDB3-203ENST00000372056 NBR1Q14596 966 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 SLC10A5Q5PT55 438 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 USPL1Q5W0Q7 1092 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 FAM89AQ96GI7 184 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.82■□□□□ 0.12
LDB3-203ENST00000372056 ERC2O15083 957 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 REC8O95072 547 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 CTSWP56202 376 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 PROM2Q8N271 834 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 SNX21Q969T3 373 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 GPATCH3Q96I76 525 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 UBN2Q6ZU65 1347 aa15.82■□□□□ 0.12
LDB3-203ENST00000372056 UBR3Q6ZT12 1888 aa15.81■□□□□ 0.12
LDB3-203ENST00000372056 RTL9Q8NET4 1388 aa15.81■□□□□ 0.12
LDB3-203ENST00000372056 TRIM6-TRIM34B2RNG4 842 aa15.81■□□□□ 0.12
LDB3-203ENST00000372056 GTF2E1P29083 439 aaPredicted RBP15.81■□□□□ 0.12
LDB3-203ENST00000372056 IL15P40933 162 aaPredicted RBP15.81■□□□□ 0.12
LDB3-203ENST00000372056 KCNQ4P56696 695 aa15.81■□□□□ 0.12
LDB3-203ENST00000372056 JARID2Q92833 1246 aaPredicted RBP15.81■□□□□ 0.12
LDB3-203ENST00000372056 GPR108Q9NPR9 543 aa15.81■□□□□ 0.12
LDB3-203ENST00000372056 TTC41PQ6P2S7 1318 aa15.81■□□□□ 0.12
LDB3-203ENST00000372056 ANKRD18BA2A2Z9 1011 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 SASH1O94885 1247 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 NTSR2O95665 410 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 CHMLP26374 656 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 CCDC152Q4G0S7 254 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 NLGN1Q8N2Q7 840 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 RILPL2Q969X0 211 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 RFX5P48382 616 aaPredicted RBP15.8■□□□□ 0.12
LDB3-203ENST00000372056 PTPN12Q05209 780 aaKnown RBP15.8■□□□□ 0.12
LDB3-203ENST00000372056 TAF7LQ5H9L4 462 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 HSCBQ8IWL3 235 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 TTLL11Q8NHH1 800 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 ESYT1Q9BSJ8 1104 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 CHMP3Q9Y3E7 222 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 MYH3P11055 1940 aa15.8■□□□□ 0.12
LDB3-203ENST00000372056 ANTXR1Q9H6X2 564 aa15.79■□□□□ 0.12
LDB3-203ENST00000372056 GLRX3O76003 335 aaKnown RBP15.78■□□□□ 0.12
LDB3-203ENST00000372056 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
LDB3-203ENST00000372056 CAMKK2Q96RR4 588 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 SIL1Q9H173 461 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 AKAP2Q9Y2D5 859 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 RIC1Q4ADV7 1423 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 EYA2O00167 538 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 IFIT2P09913 472 aaKnown RBP15.78■□□□□ 0.12
LDB3-203ENST00000372056 SF3B3Q15393 1217 aaKnown RBP15.78■□□□□ 0.12
LDB3-203ENST00000372056 TBC1D9BQ66K14 1250 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 AACSQ86V21 672 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 KLHDC4Q8TBB5 520 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 ECHDC1Q9NTX5 307 aa15.78■□□□□ 0.12
LDB3-203ENST00000372056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.78■□□□□ 0.12
LDB3-203ENST00000372056 LAMB2P55268 1798 aa15.77■□□□□ 0.12
LDB3-203ENST00000372056 C4AP0C0L4 1744 aa15.77■□□□□ 0.12
LDB3-203ENST00000372056 NLRP3Q96P20 1036 aa15.77■□□□□ 0.11
LDB3-203ENST00000372056 STK32BQ9NY57 414 aa15.77■□□□□ 0.11
LDB3-203ENST00000372056 PHF14O94880 888 aa15.76■□□□□ 0.11
LDB3-203ENST00000372056 RTL5Q5HYW3 569 aaPredicted RBP15.76■□□□□ 0.11
LDB3-203ENST00000372056 TICAM2Q86XR7 235 aa15.76■□□□□ 0.11
LDB3-203ENST00000372056 EAF2Q96CJ1 260 aaPredicted RBP15.76■□□□□ 0.11
LDB3-203ENST00000372056 CDC5LQ99459 802 aaKnown RBP15.76■□□□□ 0.11
LDB3-203ENST00000372056 SLKQ9H2G2 1235 aaPredicted RBP15.76■□□□□ 0.11
LDB3-203ENST00000372056 COL24A1Q17RW2 1714 aa15.76■□□□□ 0.11
LDB3-203ENST00000372056 NPHP1O15259 732 aa15.76■□□□□ 0.11
LDB3-203ENST00000372056 MAP4K4O95819 1239 aaPredicted RBP15.76■□□□□ 0.11
LDB3-203ENST00000372056 GYS1P13807 737 aa15.76■□□□□ 0.11
LDB3-203ENST00000372056 RABEP1Q15276 862 aa15.76■□□□□ 0.11
LDB3-203ENST00000372056 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
LDB3-203ENST00000372056 CEP126Q9P2H0 1117 aa15.76■□□□□ 0.11
LDB3-203ENST00000372056 ITGA6P23229 1130 aa15.75■□□□□ 0.11
LDB3-203ENST00000372056 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
LDB3-203ENST00000372056 CD2BP2O95400 341 aaKnown RBP15.74■□□□□ 0.11
LDB3-203ENST00000372056 TM4SF1P30408 202 aa15.74■□□□□ 0.11
LDB3-203ENST00000372056 ST5P78524 1137 aa15.74■□□□□ 0.11
LDB3-203ENST00000372056 MROH5Q6ZUA9 1318 aa15.74■□□□□ 0.11
LDB3-203ENST00000372056 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
LDB3-203ENST00000372056 IGHMBP2P38935 993 aaKnown RBP15.74■□□□□ 0.11
LDB3-203ENST00000372056 LDHAL6AQ6ZMR3 332 aa15.74■□□□□ 0.11
LDB3-203ENST00000372056 AK9Q5TCS8 1911 aa15.73■□□□□ 0.11
LDB3-203ENST00000372056 NFIXQ14938 502 aa15.73■□□□□ 0.11
LDB3-203ENST00000372056 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
LDB3-203ENST00000372056 SLC15A2Q16348 729 aa15.73■□□□□ 0.11
LDB3-203ENST00000372056 BICDL1Q6ZP65 573 aa15.73■□□□□ 0.11
LDB3-203ENST00000372056 CNBD1Q8NA66 436 aa15.73■□□□□ 0.11
LDB3-203ENST00000372056 MPHOSPH8Q99549 860 aa15.73■□□□□ 0.11
LDB3-203ENST00000372056 CCDC8Q9H0W5 538 aaPredicted RBP15.73■□□□□ 0.11
LDB3-203ENST00000372056 TLR7Q9NYK1 1049 aaKnown RBP15.73■□□□□ 0.11
LDB3-203ENST00000372056 EPB41L2O43491 1005 aaKnown RBP15.71■□□□□ 0.11
LDB3-203ENST00000372056 DEKP35659 375 aaKnown RBP15.71■□□□□ 0.11
LDB3-203ENST00000372056 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
LDB3-203ENST00000372056 TFCP2Q12800 502 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms