RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 UBE3BQ7Z3V4 1068 aa16■□□□□ 0.15
SNCG-202ENST00000372017 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
SNCG-202ENST00000372017 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
SNCG-202ENST00000372017 PDE8AO60658 829 aa15.99■□□□□ 0.15
SNCG-202ENST00000372017 CELF1Q92879 486 aaKnown RBP15.98■□□□□ 0.15
SNCG-202ENST00000372017 CCDC85AQ96PX6 553 aaPredicted RBP15.98■□□□□ 0.15
SNCG-202ENST00000372017 SRCIN1Q9C0H9 1055 aa15.98■□□□□ 0.15
SNCG-202ENST00000372017 SEC31BQ9NQW1 1179 aa15.98■□□□□ 0.15
SNCG-202ENST00000372017 ALDH1L1O75891 902 aa15.97■□□□□ 0.15
SNCG-202ENST00000372017 EPHA10Q5JZY3 1008 aa15.97■□□□□ 0.15
SNCG-202ENST00000372017 TTLL11Q8NHH1 800 aa15.97■□□□□ 0.15
SNCG-202ENST00000372017 YTHDC1Q96MU7 727 aaKnown RBP15.97■□□□□ 0.15
SNCG-202ENST00000372017 PPEF1O14829 653 aaPredicted RBP15.96■□□□□ 0.15
SNCG-202ENST00000372017 NBPF7P0C2Y1 421 aaPredicted RBP15.96■□□□□ 0.15
SNCG-202ENST00000372017 CTSWP56202 376 aa15.96■□□□□ 0.15
SNCG-202ENST00000372017 FOXO4P98177 505 aa15.96■□□□□ 0.15
SNCG-202ENST00000372017 GRAPQ13588 217 aa15.96■□□□□ 0.15
SNCG-202ENST00000372017 DDX46Q7L014 1031 aaKnown RBP15.96■□□□□ 0.15
SNCG-202ENST00000372017 GRAPLQ8TC17 118 aaPredicted RBP15.96■□□□□ 0.15
SNCG-202ENST00000372017 KAZALD1Q96I82 304 aa15.96■□□□□ 0.15
SNCG-202ENST00000372017 PLA2G12BQ9BX93 195 aa15.96■□□□□ 0.15
SNCG-202ENST00000372017 LRRC37AA6NMS7 1700 aa15.96■□□□□ 0.15
SNCG-202ENST00000372017 GRM8O00222 908 aa15.95■□□□□ 0.14
SNCG-202ENST00000372017 GREM2Q9H772 168 aa15.95■□□□□ 0.14
SNCG-202ENST00000372017 SPEF2Q9C093 1822 aa15.95■□□□□ 0.14
SNCG-202ENST00000372017 UTYO14607 1347 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 CSF1RP07333 972 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 TRIM27P14373 513 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 HSPA6P17066 643 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 CCDC93Q567U6 631 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 ARHGAP45Q92619 1136 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 FRAT1Q92837 279 aaPredicted RBP15.94■□□□□ 0.14
SNCG-202ENST00000372017 SUCLG2Q96I99 432 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 USP44Q9H0E7 712 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 ATP6V0A2Q9Y487 856 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
SNCG-202ENST00000372017 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
SNCG-202ENST00000372017 BBOX1O75936 387 aa15.93■□□□□ 0.14
SNCG-202ENST00000372017 C9orf131Q5VYM1 1079 aa15.93■□□□□ 0.14
SNCG-202ENST00000372017 API5Q9BZZ5 524 aaKnown RBP15.93■□□□□ 0.14
SNCG-202ENST00000372017 C9orf78Q9NZ63 289 aaPredicted RBP15.93■□□□□ 0.14
SNCG-202ENST00000372017 DUOX1Q9NRD9 1551 aa15.92■□□□□ 0.14
SNCG-202ENST00000372017 LTBP1Q14766 1721 aa15.92■□□□□ 0.14
SNCG-202ENST00000372017 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
SNCG-202ENST00000372017 ATF7IPQ6VMQ6 1270 aa15.92■□□□□ 0.14
SNCG-202ENST00000372017 SP8Q8IXZ3 490 aa15.92■□□□□ 0.14
SNCG-202ENST00000372017 COL4A5P29400 1685 aa15.92■□□□□ 0.14
SNCG-202ENST00000372017 LTBP3Q9NS15 1303 aa15.92■□□□□ 0.14
SNCG-202ENST00000372017 TIAM2Q8IVF5 1701 aa15.91■□□□□ 0.14
SNCG-202ENST00000372017 RTL9Q8NET4 1388 aa15.91■□□□□ 0.14
SNCG-202ENST00000372017 HSP90B1P14625 803 aaKnown RBP15.91■□□□□ 0.14
SNCG-202ENST00000372017 RPS8P62241 208 aaKnown RBP15.91■□□□□ 0.14
SNCG-202ENST00000372017 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
SNCG-202ENST00000372017 FAM161AQ3B820 660 aa15.91■□□□□ 0.14
SNCG-202ENST00000372017 SOGA3Q5TF21 947 aa15.91■□□□□ 0.14
SNCG-202ENST00000372017 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
SNCG-202ENST00000372017 TAOK3Q9H2K8 898 aa15.91■□□□□ 0.14
SNCG-202ENST00000372017 RNF181Q9P0P0 153 aa15.91■□□□□ 0.14
SNCG-202ENST00000372017 LMNB1P20700 586 aa15.9■□□□□ 0.14
SNCG-202ENST00000372017 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
SNCG-202ENST00000372017 INTS3Q68E01 1043 aaKnown RBP15.9■□□□□ 0.14
SNCG-202ENST00000372017 RTKN2Q8IZC4 609 aa15.9■□□□□ 0.14
SNCG-202ENST00000372017 ZNF277Q9NRM2 450 aaPredicted RBP15.9■□□□□ 0.14
SNCG-202ENST00000372017 RLBP1P12271 317 aa15.89■□□□□ 0.13
SNCG-202ENST00000372017 ITGA6P23229 1130 aa15.89■□□□□ 0.13
SNCG-202ENST00000372017 CC2D2BQ6DHV5 1058 aa15.89■□□□□ 0.13
SNCG-202ENST00000372017 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
SNCG-202ENST00000372017 WTIPA6NIX2 430 aaPredicted RBP15.88■□□□□ 0.13
SNCG-202ENST00000372017 GPSM2P81274 684 aa15.88■□□□□ 0.13
SNCG-202ENST00000372017 ZKSCAN2Q63HK3 967 aa15.88■□□□□ 0.13
SNCG-202ENST00000372017 TMEM57Q8N5G2 664 aa15.88■□□□□ 0.13
SNCG-202ENST00000372017 ANKRD44Q8N8A2 993 aa15.88■□□□□ 0.13
SNCG-202ENST00000372017 PSMD1Q99460 953 aa15.88■□□□□ 0.13
SNCG-202ENST00000372017 MEIS3Q99687 375 aa15.88■□□□□ 0.13
SNCG-202ENST00000372017 BICC1Q9H694 974 aaKnown RBP15.88■□□□□ 0.13
SNCG-202ENST00000372017 A0A1B0GUL6 1792 aa15.87■□□□□ 0.13
SNCG-202ENST00000372017 IPO8O15397 1037 aaKnown RBP15.87■□□□□ 0.13
SNCG-202ENST00000372017 RABL6Q3YEC7 729 aaPredicted RBP15.87■□□□□ 0.13
SNCG-202ENST00000372017 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
SNCG-202ENST00000372017 ZNF594Q96JF6 807 aaPredicted RBP15.87■□□□□ 0.13
SNCG-202ENST00000372017 RTFDC1Q9BY42 306 aaPredicted RBP15.87■□□□□ 0.13
SNCG-202ENST00000372017 RCAN3Q9UKA8 241 aa15.87■□□□□ 0.13
SNCG-202ENST00000372017 KIF3CO14782 793 aa15.86■□□□□ 0.13
SNCG-202ENST00000372017 PLIN1O60240 522 aa15.86■□□□□ 0.13
SNCG-202ENST00000372017 IARSP41252 1262 aaKnown RBP15.86■□□□□ 0.13
SNCG-202ENST00000372017 TMC4Q7Z404 712 aa15.86■□□□□ 0.13
SNCG-202ENST00000372017 MPNDQ8N594 471 aa15.86■□□□□ 0.13
SNCG-202ENST00000372017 GPR101Q96P66 508 aaPredicted RBP15.86■□□□□ 0.13
SNCG-202ENST00000372017 POLLQ9UGP5 575 aa15.86■□□□□ 0.13
SNCG-202ENST00000372017 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
SNCG-202ENST00000372017 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
SNCG-202ENST00000372017 BSDC1Q9NW68 430 aaPredicted RBP15.85■□□□□ 0.13
SNCG-202ENST00000372017 MINPP1Q9UNW1 487 aa15.85■□□□□ 0.13
SNCG-202ENST00000372017 NSFL1CQ9UNZ2 370 aaKnown RBP15.85■□□□□ 0.13
SNCG-202ENST00000372017 CHMP3Q9Y3E7 222 aa15.85■□□□□ 0.13
SNCG-202ENST00000372017 ANKRD18BA2A2Z9 1011 aa15.84■□□□□ 0.13
SNCG-202ENST00000372017 AOC3Q16853 763 aa15.84■□□□□ 0.13
SNCG-202ENST00000372017 GRIPAP1Q4V328 841 aa15.84■□□□□ 0.13
SNCG-202ENST00000372017 PANK1Q8TE04 598 aa15.84■□□□□ 0.13
SNCG-202ENST00000372017 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms