RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
LCN1-202ENST00000371781 ZNF784Q8NCA9 323 aaPredicted RBP13.53□□□□□ -0.24
LCN1-202ENST00000371781 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
LCN1-202ENST00000371781 SYT17Q9BSW7 474 aa13.53□□□□□ -0.24
LCN1-202ENST00000371781 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
LCN1-202ENST00000371781 ZNF652Q9Y2D9 606 aa13.53□□□□□ -0.24
LCN1-202ENST00000371781 APBB1O00213 710 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
LCN1-202ENST00000371781 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
LCN1-202ENST00000371781 CTSWP56202 376 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 DDR1Q08345 913 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 BICDL1Q6ZP65 573 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.25
LCN1-202ENST00000371781 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
LCN1-202ENST00000371781 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
LCN1-202ENST00000371781 MTFR1LQ9H019 292 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 COPRSQ9NQ92 184 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 SH3TC1Q8TE82 1336 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 CARMIL3Q8ND23 1372 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 TAF1P21675 1872 aa13.52□□□□□ -0.25
LCN1-202ENST00000371781 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
LCN1-202ENST00000371781 SASH1O94885 1247 aa13.51□□□□□ -0.25
LCN1-202ENST00000371781 RFC4P35249 363 aa13.51□□□□□ -0.25
LCN1-202ENST00000371781 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
LCN1-202ENST00000371781 TTLL11Q8NHH1 800 aa13.51□□□□□ -0.25
LCN1-202ENST00000371781 ZNF594Q96JF6 807 aaPredicted RBP13.51□□□□□ -0.25
LCN1-202ENST00000371781 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
LCN1-202ENST00000371781 ZPR1O75312 459 aa13.5□□□□□ -0.25
LCN1-202ENST00000371781 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
LCN1-202ENST00000371781 GREM2Q9H772 168 aa13.5□□□□□ -0.25
LCN1-202ENST00000371781 COL11A2P13942 1736 aaPredicted RBP13.5□□□□□ -0.25
LCN1-202ENST00000371781 PDE8AO60658 829 aa13.49□□□□□ -0.25
LCN1-202ENST00000371781 TM4SF1P30408 202 aa13.49□□□□□ -0.25
LCN1-202ENST00000371781 ATG9AQ7Z3C6 839 aa13.49□□□□□ -0.25
LCN1-202ENST00000371781 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
LCN1-202ENST00000371781 RHPN1Q8TCX5 695 aa13.49□□□□□ -0.25
LCN1-202ENST00000371781 SIL1Q9H173 461 aa13.49□□□□□ -0.25
LCN1-202ENST00000371781 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
LCN1-202ENST00000371781 RTL9Q8NET4 1388 aa13.48□□□□□ -0.25
LCN1-202ENST00000371781 PUS3Q9BZE2 481 aaKnown RBP13.48□□□□□ -0.25
LCN1-202ENST00000371781 LRRCC1Q9C099 1032 aa13.48□□□□□ -0.25
LCN1-202ENST00000371781 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
LCN1-202ENST00000371781 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
LCN1-202ENST00000371781 ZNF609O15014 1411 aa13.47□□□□□ -0.25
LCN1-202ENST00000371781 ARAP2Q8WZ64 1704 aa13.47□□□□□ -0.25
LCN1-202ENST00000371781 POLRMTO00411 1230 aaKnown RBP13.47□□□□□ -0.25
LCN1-202ENST00000371781 GSPT1P15170 499 aaKnown RBP13.47□□□□□ -0.25
LCN1-202ENST00000371781 LRRC24Q50LG9 513 aa13.47□□□□□ -0.25
LCN1-202ENST00000371781 SLC10A5Q5PT55 438 aa13.47□□□□□ -0.25
LCN1-202ENST00000371781 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
LCN1-202ENST00000371781 SLC51AQ86UW1 340 aa13.47□□□□□ -0.25
LCN1-202ENST00000371781 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
LCN1-202ENST00000371781 RAB11FIP3O75154 756 aa13.46□□□□□ -0.25
LCN1-202ENST00000371781 PRR5LQ6MZQ0 368 aa13.46□□□□□ -0.25
LCN1-202ENST00000371781 KIF1BPQ96EK5 621 aa13.46□□□□□ -0.25
LCN1-202ENST00000371781 SETDB2Q96T68 719 aa13.46□□□□□ -0.25
LCN1-202ENST00000371781 SEC31BQ9NQW1 1179 aa13.46□□□□□ -0.25
LCN1-202ENST00000371781 TLR7Q9NYK1 1049 aaKnown RBP13.46□□□□□ -0.25
LCN1-202ENST00000371781 ITGA6P23229 1130 aa13.45□□□□□ -0.26
LCN1-202ENST00000371781 C8orf34Q49A92 452 aa13.45□□□□□ -0.26
LCN1-202ENST00000371781 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
LCN1-202ENST00000371781 EAF2Q96CJ1 260 aaPredicted RBP13.45□□□□□ -0.26
LCN1-202ENST00000371781 EYA2O00167 538 aa13.44□□□□□ -0.26
LCN1-202ENST00000371781 TFCP2Q12800 502 aa13.44□□□□□ -0.26
LCN1-202ENST00000371781 SF3B3Q15393 1217 aaKnown RBP13.44□□□□□ -0.26
LCN1-202ENST00000371781 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
LCN1-202ENST00000371781 GOLGB1Q14789 3259 aaKnown RBP13.44□□□□□ -0.26
LCN1-202ENST00000371781 LRRC37AA6NMS7 1700 aa13.44□□□□□ -0.26
LCN1-202ENST00000371781 CIAO1O76071 339 aa13.43□□□□□ -0.26
LCN1-202ENST00000371781 SERPINB2P05120 415 aa13.43□□□□□ -0.26
LCN1-202ENST00000371781 VGLL2Q8N8G2 317 aa13.43□□□□□ -0.26
LCN1-202ENST00000371781 NYXQ9GZU5 481 aa13.43□□□□□ -0.26
LCN1-202ENST00000371781 BCL11AQ9H165 835 aa13.43□□□□□ -0.26
LCN1-202ENST00000371781 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
LCN1-202ENST00000371781 PDE1AP54750 535 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
LCN1-202ENST00000371781 IFIT5Q13325 482 aaKnown RBP13.42□□□□□ -0.26
LCN1-202ENST00000371781 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
LCN1-202ENST00000371781 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 FLAD1Q8NFF5 587 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 PI4K2BQ8TCG2 481 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 OSBPL3Q9H4L5 887 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 STAP2Q9UGK3 403 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 RIPOR2Q9Y4F9 1068 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 KIAA1551Q9HCM1 1747 aa13.42□□□□□ -0.26
LCN1-202ENST00000371781 ANKRD18BA2A2Z9 1011 aa13.41□□□□□ -0.26
LCN1-202ENST00000371781 C1QTNF8P60827 252 aa13.41□□□□□ -0.26
LCN1-202ENST00000371781 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
LCN1-202ENST00000371781 TNNI3KQ59H18 835 aa13.41□□□□□ -0.26
LCN1-202ENST00000371781 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
LCN1-202ENST00000371781 DBNLQ9UJU6 430 aaKnown RBP13.41□□□□□ -0.26
LCN1-202ENST00000371781 FPGT-TNNI3KV9GXZ4 949 aa13.41□□□□□ -0.26
LCN1-202ENST00000371781 LTBP1Q14766 1721 aa13.41□□□□□ -0.26
LCN1-202ENST00000371781 MMP10P09238 476 aa13.4□□□□□ -0.26
LCN1-202ENST00000371781 MX1P20591 662 aa13.4□□□□□ -0.26
LCN1-202ENST00000371781 IL15P40933 162 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms