RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TCERG1O14776 1098 aaKnown RBP19.55■□□□□ 0.72
SS18L1-202ENST00000370848 SP8Q8IXZ3 490 aa19.55■□□□□ 0.72
SS18L1-202ENST00000370848 LARGE2Q8N3Y3 721 aa19.55■□□□□ 0.72
SS18L1-202ENST00000370848 SH3TC1Q8TE82 1336 aa19.54■□□□□ 0.72
SS18L1-202ENST00000370848 TMC4Q7Z404 712 aa19.54■□□□□ 0.72
SS18L1-202ENST00000370848 PLBD2Q8NHP8 589 aa19.54■□□□□ 0.72
SS18L1-202ENST00000370848 ISCA1Q9BUE6 129 aa19.54■□□□□ 0.72
SS18L1-202ENST00000370848 DBF4Q9UBU7 674 aaPredicted RBP19.54■□□□□ 0.72
SS18L1-202ENST00000370848 CDHR2Q9BYE9 1310 aa19.53■□□□□ 0.72
SS18L1-202ENST00000370848 RASSF10A6NK89 507 aa19.53■□□□□ 0.72
SS18L1-202ENST00000370848 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
SS18L1-202ENST00000370848 TRIM28Q13263 835 aaKnown RBP19.53■□□□□ 0.72
SS18L1-202ENST00000370848 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
SS18L1-202ENST00000370848 SUPT20HQ8NEM7 779 aa19.53■□□□□ 0.72
SS18L1-202ENST00000370848 KIAA2012Q0VF49 1180 aa19.52■□□□□ 0.72
SS18L1-202ENST00000370848 GRAPQ13588 217 aa19.52■□□□□ 0.72
SS18L1-202ENST00000370848 EAPPQ56P03 285 aaPredicted RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 USP50Q70EL3 339 aaPredicted RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 CNTROBQ8N137 903 aa19.52■□□□□ 0.72
SS18L1-202ENST00000370848 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 PHAXQ9H814 394 aaKnown RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 MKRN1Q9UHC7 482 aaKnown RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 PPIP5K2O43314 1243 aa19.51■□□□□ 0.71
SS18L1-202ENST00000370848 NIM1KQ8IY84 436 aa19.51■□□□□ 0.71
SS18L1-202ENST00000370848 TRMT112Q9UI30 125 aaKnown RBP19.51■□□□□ 0.71
SS18L1-202ENST00000370848 TAF1P21675 1872 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 TRPM7Q96QT4 1865 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 HCLS1P14317 486 aaPredicted RBP19.5■□□□□ 0.71
SS18L1-202ENST00000370848 LMOD1P29536 600 aaPredicted RBP19.5■□□□□ 0.71
SS18L1-202ENST00000370848 GOLGA2Q08379 1002 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 SF3B3Q15393 1217 aaKnown RBP19.5■□□□□ 0.71
SS18L1-202ENST00000370848 AOC3Q16853 763 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 ANKRD13DQ6ZTN6 518 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 HYPKQ9NX55 129 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 ZNRF3Q9ULT6 936 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 EPS15P42566 896 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 CCDC30Q5VVM6 783 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 MAP1SQ66K74 1059 aaPredicted RBP19.49■□□□□ 0.71
SS18L1-202ENST00000370848 ZNF428Q96B54 188 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 TMX4Q9H1E5 349 aaPredicted RBP19.49■□□□□ 0.71
SS18L1-202ENST00000370848 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 GPRC5DQ9NZD1 345 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 COL4A1P02462 1669 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 VAMP4O75379 141 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 VEGFBP49765 207 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 CXCL9Q07325 125 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 DPP8Q6V1X1 898 aaPredicted RBP19.48■□□□□ 0.71
SS18L1-202ENST00000370848 DDX46Q7L014 1031 aaKnown RBP19.48■□□□□ 0.71
SS18L1-202ENST00000370848 MPNDQ8N594 471 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 CDCA7LQ96GN5 454 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 PGAP2Q9UHJ9 254 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 GJA3Q9Y6H8 435 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 TNS4Q8IZW8 715 aa19.47■□□□□ 0.71
SS18L1-202ENST00000370848 ADARB2Q9NS39 739 aaKnown RBP19.47■□□□□ 0.71
SS18L1-202ENST00000370848 CLEC11AQ9Y240 323 aa19.47■□□□□ 0.71
SS18L1-202ENST00000370848 G2E3Q7L622 706 aa19.46■□□□□ 0.71
SS18L1-202ENST00000370848 PRDM10Q9NQV6 1147 aa19.46■□□□□ 0.71
SS18L1-202ENST00000370848 WBP1LQ9NX94 342 aa19.45■□□□□ 0.7
SS18L1-202ENST00000370848 FOXN1O15353 648 aa19.44■□□□□ 0.7
SS18L1-202ENST00000370848 SLFN5Q08AF3 891 aa19.44■□□□□ 0.7
SS18L1-202ENST00000370848 STK31Q9BXU1 1019 aa19.44■□□□□ 0.7
SS18L1-202ENST00000370848 ZNF609O15014 1411 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 E9PSI1 815 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 ATP5J2-PTCD1G3V325 749 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 DEFB115Q30KQ5 88 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 CIAPIN1Q6FI81 312 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 ZC3H15Q8WU90 426 aaKnown RBP19.43■□□□□ 0.7
SS18L1-202ENST00000370848 FAM89AQ96GI7 184 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 YDJCA8MPS7 323 aa19.42■□□□□ 0.7
SS18L1-202ENST00000370848 SLC4A2P04920 1241 aa19.42■□□□□ 0.7
SS18L1-202ENST00000370848 GMPSP49915 693 aaPredicted RBP19.42■□□□□ 0.7
SS18L1-202ENST00000370848 TNIP1Q15025 636 aa19.42■□□□□ 0.7
SS18L1-202ENST00000370848 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
SS18L1-202ENST00000370848 CELF1Q92879 486 aaKnown RBP19.42■□□□□ 0.7
SS18L1-202ENST00000370848 CST9Q5W186 159 aa19.41■□□□□ 0.7
SS18L1-202ENST00000370848 ZBTB38Q8NAP3 1195 aaPredicted RBP19.41■□□□□ 0.7
SS18L1-202ENST00000370848 WDR33Q9C0J8 1336 aaKnown RBP19.41■□□□□ 0.7
SS18L1-202ENST00000370848 PSME4Q14997 1843 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 CTCFP49711 727 aaPredicted RBP19.4■□□□□ 0.7
SS18L1-202ENST00000370848 DPF2Q92785 391 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 HHIPL1Q96JK4 782 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 MYD88Q99836 296 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 CHMP4AQ9BY43 222 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 PODXL2Q9NZ53 605 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 TLL2Q9Y6L7 1015 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 IRS4O14654 1257 aaPredicted RBP19.39■□□□□ 0.69
SS18L1-202ENST00000370848 HSP90B1P14625 803 aaKnown RBP19.39■□□□□ 0.69
SS18L1-202ENST00000370848 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
SS18L1-202ENST00000370848 CCDC191Q8NCU4 936 aa19.39■□□□□ 0.69
SS18L1-202ENST00000370848 MAP3K2Q9Y2U5 619 aa19.39■□□□□ 0.69
SS18L1-202ENST00000370848 PI4KAP2A4QPH2 592 aa19.38■□□□□ 0.69
SS18L1-202ENST00000370848 PCCAP05165 728 aaPredicted RBP19.38■□□□□ 0.69
SS18L1-202ENST00000370848 HIRAP54198 1017 aaPredicted RBP19.38■□□□□ 0.69
SS18L1-202ENST00000370848 MAP2K1Q02750 393 aaPredicted RBP19.38■□□□□ 0.69
SS18L1-202ENST00000370848 FLIIQ13045 1269 aa19.38■□□□□ 0.69
SS18L1-202ENST00000370848 TRMT2AQ8IZ69 625 aaKnown RBP19.38■□□□□ 0.69
SS18L1-202ENST00000370848 PI4KAP1Q8N8J0 262 aa19.38■□□□□ 0.69
SS18L1-202ENST00000370848 DDX58O95786 925 aaKnown RBP19.37■□□□□ 0.69
SS18L1-202ENST00000370848 FMR1Q06787 632 aaKnown RBP eCLIP19.37■□□□□ 0.69
SS18L1-202ENST00000370848 WASHC4Q2M389 1173 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms