RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TCERG1O14776 1098 aaKnown RBP19.55■□□□□ 0.72
SS18L1-202ENST00000370848 SP8Q8IXZ3 490 aa19.55■□□□□ 0.72
SS18L1-202ENST00000370848 LARGE2Q8N3Y3 721 aa19.55■□□□□ 0.72
SS18L1-202ENST00000370848 SH3TC1Q8TE82 1336 aa19.54■□□□□ 0.72
SS18L1-202ENST00000370848 TMC4Q7Z404 712 aa19.54■□□□□ 0.72
SS18L1-202ENST00000370848 PLBD2Q8NHP8 589 aa19.54■□□□□ 0.72
SS18L1-202ENST00000370848 ISCA1Q9BUE6 129 aa19.54■□□□□ 0.72
SS18L1-202ENST00000370848 DBF4Q9UBU7 674 aaPredicted RBP19.54■□□□□ 0.72
SS18L1-202ENST00000370848 CDHR2Q9BYE9 1310 aa19.53■□□□□ 0.72
SS18L1-202ENST00000370848 RASSF10A6NK89 507 aa19.53■□□□□ 0.72
SS18L1-202ENST00000370848 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
SS18L1-202ENST00000370848 TRIM28Q13263 835 aaKnown RBP19.53■□□□□ 0.72
SS18L1-202ENST00000370848 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
SS18L1-202ENST00000370848 SUPT20HQ8NEM7 779 aa19.53■□□□□ 0.72
SS18L1-202ENST00000370848 KIAA2012Q0VF49 1180 aa19.52■□□□□ 0.72
SS18L1-202ENST00000370848 GRAPQ13588 217 aa19.52■□□□□ 0.72
SS18L1-202ENST00000370848 EAPPQ56P03 285 aaPredicted RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 USP50Q70EL3 339 aaPredicted RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 CNTROBQ8N137 903 aa19.52■□□□□ 0.72
SS18L1-202ENST00000370848 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 PHAXQ9H814 394 aaKnown RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 MKRN1Q9UHC7 482 aaKnown RBP19.52■□□□□ 0.72
SS18L1-202ENST00000370848 PPIP5K2O43314 1243 aa19.51■□□□□ 0.71
SS18L1-202ENST00000370848 NIM1KQ8IY84 436 aa19.51■□□□□ 0.71
SS18L1-202ENST00000370848 TRMT112Q9UI30 125 aaKnown RBP19.51■□□□□ 0.71
SS18L1-202ENST00000370848 TAF1P21675 1872 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 TRPM7Q96QT4 1865 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 HCLS1P14317 486 aaPredicted RBP19.5■□□□□ 0.71
SS18L1-202ENST00000370848 LMOD1P29536 600 aaPredicted RBP19.5■□□□□ 0.71
SS18L1-202ENST00000370848 GOLGA2Q08379 1002 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 SF3B3Q15393 1217 aaKnown RBP19.5■□□□□ 0.71
SS18L1-202ENST00000370848 AOC3Q16853 763 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 ANKRD13DQ6ZTN6 518 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 HYPKQ9NX55 129 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 ZNRF3Q9ULT6 936 aa19.5■□□□□ 0.71
SS18L1-202ENST00000370848 EPS15P42566 896 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 CCDC30Q5VVM6 783 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 MAP1SQ66K74 1059 aaPredicted RBP19.49■□□□□ 0.71
SS18L1-202ENST00000370848 ZNF428Q96B54 188 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 TMX4Q9H1E5 349 aaPredicted RBP19.49■□□□□ 0.71
SS18L1-202ENST00000370848 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 GPRC5DQ9NZD1 345 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 COL4A1P02462 1669 aa19.49■□□□□ 0.71
SS18L1-202ENST00000370848 VAMP4O75379 141 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 VEGFBP49765 207 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 CXCL9Q07325 125 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 DPP8Q6V1X1 898 aaPredicted RBP19.48■□□□□ 0.71
SS18L1-202ENST00000370848 DDX46Q7L014 1031 aaKnown RBP19.48■□□□□ 0.71
SS18L1-202ENST00000370848 MPNDQ8N594 471 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 CDCA7LQ96GN5 454 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 PGAP2Q9UHJ9 254 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 GJA3Q9Y6H8 435 aa19.48■□□□□ 0.71
SS18L1-202ENST00000370848 TNS4Q8IZW8 715 aa19.47■□□□□ 0.71
SS18L1-202ENST00000370848 ADARB2Q9NS39 739 aaKnown RBP19.47■□□□□ 0.71
SS18L1-202ENST00000370848 CLEC11AQ9Y240 323 aa19.47■□□□□ 0.71
SS18L1-202ENST00000370848 G2E3Q7L622 706 aa19.46■□□□□ 0.71
SS18L1-202ENST00000370848 PRDM10Q9NQV6 1147 aa19.46■□□□□ 0.71
SS18L1-202ENST00000370848 WBP1LQ9NX94 342 aa19.45■□□□□ 0.7
SS18L1-202ENST00000370848 FOXN1O15353 648 aa19.44■□□□□ 0.7
SS18L1-202ENST00000370848 SLFN5Q08AF3 891 aa19.44■□□□□ 0.7
SS18L1-202ENST00000370848 STK31Q9BXU1 1019 aa19.44■□□□□ 0.7
SS18L1-202ENST00000370848 ZNF609O15014 1411 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 E9PSI1 815 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 ATP5J2-PTCD1G3V325 749 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 DEFB115Q30KQ5 88 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 CIAPIN1Q6FI81 312 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 ZC3H15Q8WU90 426 aaKnown RBP19.43■□□□□ 0.7
SS18L1-202ENST00000370848 FAM89AQ96GI7 184 aa19.43■□□□□ 0.7
SS18L1-202ENST00000370848 YDJCA8MPS7 323 aa19.42■□□□□ 0.7
SS18L1-202ENST00000370848 SLC4A2P04920 1241 aa19.42■□□□□ 0.7
SS18L1-202ENST00000370848 GMPSP49915 693 aaPredicted RBP19.42■□□□□ 0.7
SS18L1-202ENST00000370848 TNIP1Q15025 636 aa19.42■□□□□ 0.7
SS18L1-202ENST00000370848 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
SS18L1-202ENST00000370848 CELF1Q92879 486 aaKnown RBP19.42■□□□□ 0.7
SS18L1-202ENST00000370848 CST9Q5W186 159 aa19.41■□□□□ 0.7
SS18L1-202ENST00000370848 ZBTB38Q8NAP3 1195 aaPredicted RBP19.41■□□□□ 0.7
SS18L1-202ENST00000370848 WDR33Q9C0J8 1336 aaKnown RBP19.41■□□□□ 0.7
SS18L1-202ENST00000370848 PSME4Q14997 1843 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 CTCFP49711 727 aaPredicted RBP19.4■□□□□ 0.7
SS18L1-202ENST00000370848 DPF2Q92785 391 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 HHIPL1Q96JK4 782 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 MYD88Q99836 296 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 CHMP4AQ9BY43 222 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 PODXL2Q9NZ53 605 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 TLL2Q9Y6L7 1015 aa19.4■□□□□ 0.7
SS18L1-202ENST00000370848 IRS4O14654 1257 aaPredicted RBP19.39■□□□□ 0.69
SS18L1-202ENST00000370848 HSP90B1P14625 803 aaKnown RBP19.39■□□□□ 0.69
SS18L1-202ENST00000370848 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
SS18L1-202ENST00000370848 CCDC191Q8NCU4 936 aa19.39■□□□□ 0.69
SS18L1-202ENST00000370848 MAP3K2Q9Y2U5 619 aa19.39■□□□□ 0.69
SS18L1-202ENST00000370848 PI4KAP2A4QPH2 592 aa19.38■□□□□ 0.69
SS18L1-202ENST00000370848 PCCAP05165 728 aaPredicted RBP19.38■□□□□ 0.69
SS18L1-202ENST00000370848 HIRAP54198 1017 aaPredicted RBP19.38■□□□□ 0.69
SS18L1-202ENST00000370848 MAP2K1Q02750 393 aaPredicted RBP19.38■□□□□ 0.69
SS18L1-202ENST00000370848 FLIIQ13045 1269 aa19.38■□□□□ 0.69
SS18L1-202ENST00000370848 TRMT2AQ8IZ69 625 aaKnown RBP19.38■□□□□ 0.69
SS18L1-202ENST00000370848 PI4KAP1Q8N8J0 262 aa19.38■□□□□ 0.69
SS18L1-202ENST00000370848 DDX58O95786 925 aaKnown RBP19.37■□□□□ 0.69
SS18L1-202ENST00000370848 FMR1Q06787 632 aaKnown RBP eCLIP19.37■□□□□ 0.69
SS18L1-202ENST00000370848 WASHC4Q2M389 1173 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms