RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 PDE4DIPQ5VU43 2346 aa19.14■□□□□ 0.66
LMO4-201ENST00000370542 AIMP1Q12904 312 aaKnown RBP19.14■□□□□ 0.65
LMO4-201ENST00000370542 HDGFL1Q5TGJ6 251 aa19.14■□□□□ 0.65
LMO4-201ENST00000370542 PLBD2Q8NHP8 589 aa19.14■□□□□ 0.65
LMO4-201ENST00000370542 ISCA1Q9BUE6 129 aa19.14■□□□□ 0.65
LMO4-201ENST00000370542 RTFDC1Q9BY42 306 aaPredicted RBP19.14■□□□□ 0.65
LMO4-201ENST00000370542 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
LMO4-201ENST00000370542 THSD7BQ9C0I4 1608 aa19.14■□□□□ 0.65
LMO4-201ENST00000370542 LAMB2P55268 1798 aa19.14■□□□□ 0.65
LMO4-201ENST00000370542 APAF1O14727 1248 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 BBOX1O75936 387 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 DEKP35659 375 aaKnown RBP19.13■□□□□ 0.65
LMO4-201ENST00000370542 TRIM28Q13263 835 aaKnown RBP19.13■□□□□ 0.65
LMO4-201ENST00000370542 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 ANKRD13DQ6ZTN6 518 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 SLC51AQ86UW1 340 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 JDP2Q8WYK2 163 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 BEGAINQ9BUH8 593 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 IFT57Q9NWB7 429 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 HACL1Q9UJ83 578 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 LAS1LQ9Y4W2 734 aaKnown RBP19.13■□□□□ 0.65
LMO4-201ENST00000370542 ABCC4O15439 1325 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 SH3TC1Q8TE82 1336 aa19.13■□□□□ 0.65
LMO4-201ENST00000370542 HYPKQ9NX55 129 aa19.12■□□□□ 0.65
LMO4-201ENST00000370542 PNMA8AQ86V59 439 aaPredicted RBP19.11■□□□□ 0.65
LMO4-201ENST00000370542 SP8Q8IXZ3 490 aa19.11■□□□□ 0.65
LMO4-201ENST00000370542 CNTROBQ8N137 903 aa19.11■□□□□ 0.65
LMO4-201ENST00000370542 TRMT112Q9UI30 125 aaKnown RBP19.11■□□□□ 0.65
LMO4-201ENST00000370542 HCLS1P14317 486 aaPredicted RBP19.1■□□□□ 0.65
LMO4-201ENST00000370542 EPHX2P34913 555 aa19.1■□□□□ 0.65
LMO4-201ENST00000370542 GNAI1P63096 354 aa19.1■□□□□ 0.65
LMO4-201ENST00000370542 PRPF38BQ5VTL8 546 aaKnown RBP19.1■□□□□ 0.65
LMO4-201ENST00000370542 GPR101Q96P66 508 aaPredicted RBP19.1■□□□□ 0.65
LMO4-201ENST00000370542 ABT1Q9ULW3 272 aaKnown RBP19.1■□□□□ 0.65
LMO4-201ENST00000370542 CALD1Q05682 793 aaKnown RBP19.09■□□□□ 0.65
LMO4-201ENST00000370542 EAPPQ56P03 285 aaPredicted RBP19.09■□□□□ 0.65
LMO4-201ENST00000370542 CAPNS2Q96L46 248 aa19.09■□□□□ 0.65
LMO4-201ENST00000370542 EIF6P56537 245 aaKnown RBP19.08■□□□□ 0.64
LMO4-201ENST00000370542 GRAPQ13588 217 aa19.08■□□□□ 0.64
LMO4-201ENST00000370542 SF3B3Q15393 1217 aaKnown RBP19.08■□□□□ 0.64
LMO4-201ENST00000370542 MAP1SQ66K74 1059 aaPredicted RBP19.08■□□□□ 0.64
LMO4-201ENST00000370542 LARGE2Q8N3Y3 721 aa19.08■□□□□ 0.64
LMO4-201ENST00000370542 GRAPLQ8TC17 118 aaPredicted RBP19.08■□□□□ 0.64
LMO4-201ENST00000370542 TSKSQ9UJT2 592 aa19.08■□□□□ 0.64
LMO4-201ENST00000370542 CLEC11AQ9Y240 323 aa19.08■□□□□ 0.64
LMO4-201ENST00000370542 LTBP1Q14766 1721 aa19.08■□□□□ 0.64
LMO4-201ENST00000370542 DDX60Q8IY21 1712 aaKnown RBP19.08■□□□□ 0.64
LMO4-201ENST00000370542 ECE1P42892 770 aa19.07■□□□□ 0.64
LMO4-201ENST00000370542 SCNN1DP51172 638 aa19.07■□□□□ 0.64
LMO4-201ENST00000370542 TMC4Q7Z404 712 aa19.07■□□□□ 0.64
LMO4-201ENST00000370542 SUPT20HQ8NEM7 779 aa19.07■□□□□ 0.64
LMO4-201ENST00000370542 TCERG1O14776 1098 aaKnown RBP19.06■□□□□ 0.64
LMO4-201ENST00000370542 ANP32AP39687 249 aaKnown RBP19.06■□□□□ 0.64
LMO4-201ENST00000370542 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
LMO4-201ENST00000370542 DDX46Q7L014 1031 aaKnown RBP19.06■□□□□ 0.64
LMO4-201ENST00000370542 LRRC37AA6NMS7 1700 aa19.05■□□□□ 0.64
LMO4-201ENST00000370542 PPIP5K2O43314 1243 aa19.05■□□□□ 0.64
LMO4-201ENST00000370542 CA12O43570 354 aa19.05■□□□□ 0.64
LMO4-201ENST00000370542 MAP2K2P36507 400 aa19.05■□□□□ 0.64
LMO4-201ENST00000370542 KIAA2012Q0VF49 1180 aa19.05■□□□□ 0.64
LMO4-201ENST00000370542 CCDC27Q2M243 656 aa19.05■□□□□ 0.64
LMO4-201ENST00000370542 NIM1KQ8IY84 436 aa19.05■□□□□ 0.64
LMO4-201ENST00000370542 TMX4Q9H1E5 349 aaPredicted RBP19.05■□□□□ 0.64
LMO4-201ENST00000370542 TAF1P21675 1872 aa19.04■□□□□ 0.64
LMO4-201ENST00000370542 AOC3Q16853 763 aa19.04■□□□□ 0.64
LMO4-201ENST00000370542 CCDC184Q52MB2 194 aa19.04■□□□□ 0.64
LMO4-201ENST00000370542 CYP4F22Q6NT55 531 aa19.04■□□□□ 0.64
LMO4-201ENST00000370542 MPNDQ8N594 471 aa19.04■□□□□ 0.64
LMO4-201ENST00000370542 C8orf58Q8NAV2 365 aa19.04■□□□□ 0.64
LMO4-201ENST00000370542 FAM89AQ96GI7 184 aa19.04■□□□□ 0.64
LMO4-201ENST00000370542 ZNRF3Q9ULT6 936 aa19.04■□□□□ 0.64
LMO4-201ENST00000370542 DUOX1Q9NRD9 1551 aa19.03■□□□□ 0.64
LMO4-201ENST00000370542 ATP5J2-PTCD1G3V325 749 aa19.03■□□□□ 0.64
LMO4-201ENST00000370542 DGKZQ13574 1117 aa19.03■□□□□ 0.64
LMO4-201ENST00000370542 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
LMO4-201ENST00000370542 DPP8Q6V1X1 898 aaPredicted RBP19.03■□□□□ 0.64
LMO4-201ENST00000370542 CHMP4AQ9BY43 222 aa19.03■□□□□ 0.64
LMO4-201ENST00000370542 PHAXQ9H814 394 aaKnown RBP19.03■□□□□ 0.64
LMO4-201ENST00000370542 EPS15P42566 896 aa19.02■□□□□ 0.64
LMO4-201ENST00000370542 CXCL9Q07325 125 aa19.02■□□□□ 0.64
LMO4-201ENST00000370542 USP50Q70EL3 339 aaPredicted RBP19.02■□□□□ 0.64
LMO4-201ENST00000370542 GJA3Q9Y6H8 435 aa19.02■□□□□ 0.64
LMO4-201ENST00000370542 ZBTB38Q8NAP3 1195 aaPredicted RBP19.01■□□□□ 0.63
LMO4-201ENST00000370542 ELL2O00472 640 aaPredicted RBP19■□□□□ 0.63
LMO4-201ENST00000370542 IRS4O14654 1257 aaPredicted RBP19■□□□□ 0.63
LMO4-201ENST00000370542 LMOD1P29536 600 aaPredicted RBP19■□□□□ 0.63
LMO4-201ENST00000370542 GOLGA2Q08379 1002 aa19■□□□□ 0.63
LMO4-201ENST00000370542 CST9Q5W186 159 aa19■□□□□ 0.63
LMO4-201ENST00000370542 RIC3Q7Z5B4 369 aa19■□□□□ 0.63
LMO4-201ENST00000370542 CCDC191Q8NCU4 936 aa19■□□□□ 0.63
LMO4-201ENST00000370542 CELF1Q92879 486 aaKnown RBP19■□□□□ 0.63
LMO4-201ENST00000370542 MRS2Q9HD23 443 aa19■□□□□ 0.63
LMO4-201ENST00000370542 GPRC5DQ9NZD1 345 aa19■□□□□ 0.63
LMO4-201ENST00000370542 CDHR2Q9BYE9 1310 aa19■□□□□ 0.63
LMO4-201ENST00000370542 COL4A1P02462 1669 aa18.99■□□□□ 0.63
LMO4-201ENST00000370542 AOC2O75106 756 aa18.99■□□□□ 0.63
LMO4-201ENST00000370542 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
LMO4-201ENST00000370542 PAXIP1Q6ZW49 1069 aaPredicted RBP18.99■□□□□ 0.63
LMO4-201ENST00000370542 TSPYL6Q8N831 410 aa18.99■□□□□ 0.63
LMO4-201ENST00000370542 PGAP2Q9UHJ9 254 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms