RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 NCAPD2Q15021 1401 aa20.77■□□□□ 0.92
CHUK-201ENST00000370397 TNNT1P13805 278 aa20.77■□□□□ 0.91
CHUK-201ENST00000370397 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.91
CHUK-201ENST00000370397 LRRC8AQ8IWT6 810 aa20.77■□□□□ 0.91
CHUK-201ENST00000370397 SPATA32Q96LK8 384 aa20.77■□□□□ 0.91
CHUK-201ENST00000370397 ARID5BQ14865 1188 aa20.76■□□□□ 0.91
CHUK-201ENST00000370397 PAXBP1Q9Y5B6 917 aa20.76■□□□□ 0.91
CHUK-201ENST00000370397 PXDNQ92626 1479 aa20.76■□□□□ 0.91
CHUK-201ENST00000370397 SLFN14P0C7P3 912 aa20.76■□□□□ 0.91
CHUK-201ENST00000370397 PDCP20941 246 aa20.76■□□□□ 0.91
CHUK-201ENST00000370397 KIF18AQ8NI77 898 aa20.76■□□□□ 0.91
CHUK-201ENST00000370397 ZKSCAN1P17029 563 aaPredicted RBP20.75■□□□□ 0.91
CHUK-201ENST00000370397 ZNF165P49910 485 aa20.75■□□□□ 0.91
CHUK-201ENST00000370397 C11orf57Q6ZUT1 292 aaPredicted RBP20.75■□□□□ 0.91
CHUK-201ENST00000370397 ANKARQ7Z5J8 1434 aa20.75■□□□□ 0.91
CHUK-201ENST00000370397 PROSER3Q2NL68 480 aa20.75■□□□□ 0.91
CHUK-201ENST00000370397 EIF2S2P20042 333 aaKnown RBP20.74■□□□□ 0.91
CHUK-201ENST00000370397 CCZ1BP86790 482 aa20.74■□□□□ 0.91
CHUK-201ENST00000370397 CCZ1P86791 482 aaPredicted RBP20.74■□□□□ 0.91
CHUK-201ENST00000370397 USHBP1Q8N6Y0 703 aa20.74■□□□□ 0.91
CHUK-201ENST00000370397 GTF3C6Q969F1 213 aa20.74■□□□□ 0.91
CHUK-201ENST00000370397 JAK2O60674 1132 aa20.74■□□□□ 0.91
CHUK-201ENST00000370397 SNW1Q13573 536 aaKnown RBP20.74■□□□□ 0.91
CHUK-201ENST00000370397 MRFAP1L1Q96HT8 127 aa20.74■□□□□ 0.91
CHUK-201ENST00000370397 CLIP2Q9UDT6 1046 aa20.74■□□□□ 0.91
CHUK-201ENST00000370397 TRIM5Q9C035 493 aa20.73■□□□□ 0.91
CHUK-201ENST00000370397 SETD1BQ9UPS6 1966 aaKnown RBP20.73■□□□□ 0.91
CHUK-201ENST00000370397 IGSF3O75054 1194 aa20.73■□□□□ 0.91
CHUK-201ENST00000370397 TAF5LO75529 589 aa20.73■□□□□ 0.91
CHUK-201ENST00000370397 ALDH1L1O75891 902 aa20.73■□□□□ 0.91
CHUK-201ENST00000370397 PSMA5P28066 241 aa20.73■□□□□ 0.91
CHUK-201ENST00000370397 AACSQ86V21 672 aa20.73■□□□□ 0.91
CHUK-201ENST00000370397 DHX40Q8IX18 779 aaKnown RBP20.73■□□□□ 0.91
CHUK-201ENST00000370397 ANKRD1Q15327 319 aa20.72■□□□□ 0.91
CHUK-201ENST00000370397 KMT5BQ4FZB7 885 aa20.72■□□□□ 0.91
CHUK-201ENST00000370397 OVOS2A0A0G2JMS6 1433 aa20.72■□□□□ 0.91
CHUK-201ENST00000370397 BLOC1S2Q6QNY1 142 aa20.72■□□□□ 0.91
CHUK-201ENST00000370397 ERC1Q8IUD2 1116 aa20.72■□□□□ 0.91
CHUK-201ENST00000370397 GOLPH3LQ9H4A5 285 aa20.72■□□□□ 0.91
CHUK-201ENST00000370397 SMARCC2Q8TAQ2 1214 aa20.71■□□□□ 0.91
CHUK-201ENST00000370397 CGNQ9P2M7 1197 aaKnown RBP20.71■□□□□ 0.91
CHUK-201ENST00000370397 NEDD4P46934 1319 aa20.71■□□□□ 0.91
CHUK-201ENST00000370397 CEBPAP49715 358 aaPredicted RBP20.71■□□□□ 0.91
CHUK-201ENST00000370397 GABPB1Q06547 395 aaPredicted RBP20.71■□□□□ 0.91
CHUK-201ENST00000370397 CWF19L2Q2TBE0 894 aaKnown RBP20.71■□□□□ 0.91
CHUK-201ENST00000370397 SUCLG2Q96I99 432 aa20.71■□□□□ 0.91
CHUK-201ENST00000370397 MAP3K2Q9Y2U5 619 aa20.71■□□□□ 0.91
CHUK-201ENST00000370397 LMTK3Q96Q04 1460 aa20.71■□□□□ 0.91
CHUK-201ENST00000370397 NLRP6P59044 892 aa20.71■□□□□ 0.91
CHUK-201ENST00000370397 ENGASEQ8NFI3 743 aa20.71■□□□□ 0.91
CHUK-201ENST00000370397 CAVIN2O95810 425 aa20.7■□□□□ 0.9
CHUK-201ENST00000370397 IFIT2P09913 472 aaKnown RBP20.7■□□□□ 0.9
CHUK-201ENST00000370397 HIP1O00291 1037 aa20.7■□□□□ 0.9
CHUK-201ENST00000370397 NBPF6Q5VWK0 638 aa20.7■□□□□ 0.9
CHUK-201ENST00000370397 NBPF11Q86T75 865 aa20.7■□□□□ 0.9
CHUK-201ENST00000370397 NBPF4Q96M43 638 aa20.7■□□□□ 0.9
CHUK-201ENST00000370397 AMOTL2Q9Y2J4 779 aa20.7■□□□□ 0.9
CHUK-201ENST00000370397 CEP135Q66GS9 1140 aa20.69■□□□□ 0.9
CHUK-201ENST00000370397 ZNF609O15014 1411 aa20.69■□□□□ 0.9
CHUK-201ENST00000370397 HMG20BQ9P0W2 317 aa20.69■□□□□ 0.9
CHUK-201ENST00000370397 KSR2Q6VAB6 950 aa20.68■□□□□ 0.9
CHUK-201ENST00000370397 CCDC112Q8NEF3 446 aa20.68■□□□□ 0.9
CHUK-201ENST00000370397 BRF1Q92994 677 aa20.68■□□□□ 0.9
CHUK-201ENST00000370397 GPATCH3Q96I76 525 aa20.68■□□□□ 0.9
CHUK-201ENST00000370397 SLC26A8Q96RN1 970 aa20.68■□□□□ 0.9
CHUK-201ENST00000370397 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
CHUK-201ENST00000370397 ZNF215Q9UL58 517 aaPredicted RBP20.68■□□□□ 0.9
CHUK-201ENST00000370397 CTDNEP1O95476 244 aa20.68■□□□□ 0.9
CHUK-201ENST00000370397 ILDR1Q86SU0 546 aaPredicted RBP20.68■□□□□ 0.9
CHUK-201ENST00000370397 NGDNQ8NEJ9 315 aaKnown RBP20.68■□□□□ 0.9
CHUK-201ENST00000370397 ZNF446Q9NWS9 450 aa20.68■□□□□ 0.9
CHUK-201ENST00000370397 SALL1Q9NSC2 1324 aa20.68■□□□□ 0.9
CHUK-201ENST00000370397 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
CHUK-201ENST00000370397 OS9Q13438 667 aaPredicted RBP20.67■□□□□ 0.9
CHUK-201ENST00000370397 DDX11Q96FC9 970 aa20.67■□□□□ 0.9
CHUK-201ENST00000370397 CCDC8Q9H0W5 538 aaPredicted RBP20.67■□□□□ 0.9
CHUK-201ENST00000370397 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
CHUK-201ENST00000370397 CHGBP05060 677 aa20.67■□□□□ 0.9
CHUK-201ENST00000370397 RCOR1Q9UKL0 485 aa20.67■□□□□ 0.9
CHUK-201ENST00000370397 USP16Q9Y5T5 823 aa20.67■□□□□ 0.9
CHUK-201ENST00000370397 STK3Q13188 491 aa20.67■□□□□ 0.9
CHUK-201ENST00000370397 FTOQ9C0B1 505 aaKnown RBP eCLIP20.67■□□□□ 0.9
CHUK-201ENST00000370397 PDIA6Q15084 440 aa20.66■□□□□ 0.9
CHUK-201ENST00000370397 SCRN1Q12765 414 aa20.66■□□□□ 0.9
CHUK-201ENST00000370397 NUTM2GQ5VZR2 741 aa20.66■□□□□ 0.9
CHUK-201ENST00000370397 NWD2Q9ULI1 1742 aa20.66■□□□□ 0.9
CHUK-201ENST00000370397 AFDNP55196 1824 aaKnown RBP20.66■□□□□ 0.9
CHUK-201ENST00000370397 TPD52L1Q16890 204 aaPredicted RBP20.66■□□□□ 0.9
CHUK-201ENST00000370397 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
CHUK-201ENST00000370397 SLFNL1Q499Z3 407 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 TERF2Q15554 542 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 FBXO38Q6PIJ6 1188 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 CCAR2Q8N163 923 aaKnown RBP20.65■□□□□ 0.9
CHUK-201ENST00000370397 BOLA2Q9H3K6 86 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 RFX7Q2KHR2 1363 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 A0A087WWV3 80 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 IGKV5-2P06315 115 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 STOX1Q6ZVD7 989 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 DRC7Q8IY82 874 aa20.65■□□□□ 0.9
CHUK-201ENST00000370397 GRM8O00222 908 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms