RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 SLC10A5Q5PT55 438 aa20.39■□□□□ 0.85
SSR4-204ENST00000370087 PPP1R42Q7Z4L9 355 aa20.39■□□□□ 0.85
SSR4-204ENST00000370087 NLRP3Q96P20 1036 aa20.39■□□□□ 0.85
SSR4-204ENST00000370087 YDJCA8MPS7 323 aa20.38■□□□□ 0.85
SSR4-204ENST00000370087 BRPF1P55201 1214 aaPredicted RBP20.38■□□□□ 0.85
SSR4-204ENST00000370087 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
SSR4-204ENST00000370087 PARP10Q53GL7 1025 aa20.38■□□□□ 0.85
SSR4-204ENST00000370087 CIAPIN1Q6FI81 312 aa20.38■□□□□ 0.85
SSR4-204ENST00000370087 UTP14AQ9BVJ6 771 aaKnown RBP20.38■□□□□ 0.85
SSR4-204ENST00000370087 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
SSR4-204ENST00000370087 KIAA2012Q0VF49 1180 aa20.37■□□□□ 0.85
SSR4-204ENST00000370087 DPP8Q6V1X1 898 aaPredicted RBP20.37■□□□□ 0.85
SSR4-204ENST00000370087 HHIPL1Q96JK4 782 aa20.37■□□□□ 0.85
SSR4-204ENST00000370087 VPS33BQ9H267 617 aa20.37■□□□□ 0.85
SSR4-204ENST00000370087 POLR2AP24928 1970 aaKnown RBP20.37■□□□□ 0.85
SSR4-204ENST00000370087 CDHR2Q9BYE9 1310 aa20.36■□□□□ 0.85
SSR4-204ENST00000370087 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
SSR4-204ENST00000370087 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
SSR4-204ENST00000370087 SP8Q8IXZ3 490 aa20.35■□□□□ 0.85
SSR4-204ENST00000370087 MPNDQ8N594 471 aa20.35■□□□□ 0.85
SSR4-204ENST00000370087 SUPT20HQ8NEM7 779 aa20.35■□□□□ 0.85
SSR4-204ENST00000370087 ZNF428Q96B54 188 aa20.35■□□□□ 0.85
SSR4-204ENST00000370087 BCL2L13Q9BXK5 485 aa20.35■□□□□ 0.85
SSR4-204ENST00000370087 CA12O43570 354 aa20.34■□□□□ 0.85
SSR4-204ENST00000370087 EIF2S2P20042 333 aaKnown RBP20.34■□□□□ 0.85
SSR4-204ENST00000370087 EGFRP00533 1210 aa20.33■□□□□ 0.85
SSR4-204ENST00000370087 DGKZQ13574 1117 aa20.33■□□□□ 0.85
SSR4-204ENST00000370087 USP48Q86UV5 1035 aa20.33■□□□□ 0.85
SSR4-204ENST00000370087 NLRP10Q86W26 655 aa20.33■□□□□ 0.85
SSR4-204ENST00000370087 ZC3H15Q8WU90 426 aaKnown RBP20.33■□□□□ 0.85
SSR4-204ENST00000370087 TMX4Q9H1E5 349 aaPredicted RBP20.33■□□□□ 0.85
SSR4-204ENST00000370087 CNOT7Q9UIV1 285 aaKnown RBP20.33■□□□□ 0.85
SSR4-204ENST00000370087 TSPYL4Q9UJ04 414 aa20.33■□□□□ 0.85
SSR4-204ENST00000370087 ZBTB12Q9Y330 459 aaPredicted RBP20.33■□□□□ 0.85
SSR4-204ENST00000370087 BBOX1O75936 387 aa20.32■□□□□ 0.84
SSR4-204ENST00000370087 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
SSR4-204ENST00000370087 MICALL2Q8IY33 904 aa20.32■□□□□ 0.84
SSR4-204ENST00000370087 GRAPQ13588 217 aa20.31■□□□□ 0.84
SSR4-204ENST00000370087 TNIP1Q15025 636 aa20.31■□□□□ 0.84
SSR4-204ENST00000370087 SAMD7Q7Z3H4 446 aa20.31■□□□□ 0.84
SSR4-204ENST00000370087 GRAPLQ8TC17 118 aaPredicted RBP20.31■□□□□ 0.84
SSR4-204ENST00000370087 NECTIN2Q92692 538 aa20.31■□□□□ 0.84
SSR4-204ENST00000370087 SCN9AQ15858 1988 aa20.31■□□□□ 0.84
SSR4-204ENST00000370087 FAM155AB1AL88 458 aaPredicted RBP20.3■□□□□ 0.84
SSR4-204ENST00000370087 NEFMP07197 916 aa20.3■□□□□ 0.84
SSR4-204ENST00000370087 HUNKP57058 714 aa20.3■□□□□ 0.84
SSR4-204ENST00000370087 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
SSR4-204ENST00000370087 NOGQ13253 232 aa20.29■□□□□ 0.84
SSR4-204ENST00000370087 DDX46Q7L014 1031 aaKnown RBP20.29■□□□□ 0.84
SSR4-204ENST00000370087 COPS6Q7L5N1 327 aa20.29■□□□□ 0.84
SSR4-204ENST00000370087 XAGE3Q8WTP9 111 aa20.29■□□□□ 0.84
SSR4-204ENST00000370087 AKAP11Q9UKA4 1901 aa20.28■□□□□ 0.84
SSR4-204ENST00000370087 ADM5C9JUS6 153 aa20.28■□□□□ 0.84
SSR4-204ENST00000370087 PSMD14O00487 310 aa20.28■□□□□ 0.84
SSR4-204ENST00000370087 DBNDD1Q9H9R9 158 aa20.28■□□□□ 0.84
SSR4-204ENST00000370087 TRMT112Q9UI30 125 aaKnown RBP20.28■□□□□ 0.84
SSR4-204ENST00000370087 MAPK8IP3Q9UPT6 1336 aa20.27■□□□□ 0.84
SSR4-204ENST00000370087 RTL9Q8NET4 1388 aa20.27■□□□□ 0.84
SSR4-204ENST00000370087 H7C1D1 291 aa20.27■□□□□ 0.84
SSR4-204ENST00000370087 KRT24Q2M2I5 525 aa20.27■□□□□ 0.84
SSR4-204ENST00000370087 TBC1D10BQ4KMP7 808 aaPredicted RBP20.27■□□□□ 0.84
SSR4-204ENST00000370087 KCNQ5Q9NR82 932 aa20.27■□□□□ 0.84
SSR4-204ENST00000370087 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.83
SSR4-204ENST00000370087 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
SSR4-204ENST00000370087 RIMBP2O15034 1052 aa20.25■□□□□ 0.83
SSR4-204ENST00000370087 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
SSR4-204ENST00000370087 RGMBQ6NW40 437 aa20.25■□□□□ 0.83
SSR4-204ENST00000370087 KRT26Q7Z3Y9 468 aa20.25■□□□□ 0.83
SSR4-204ENST00000370087 CELF1Q92879 486 aaKnown RBP20.25■□□□□ 0.83
SSR4-204ENST00000370087 ASTN2O75129 1339 aaPredicted RBP20.25■□□□□ 0.83
SSR4-204ENST00000370087 DPF2Q92785 391 aa20.24■□□□□ 0.83
SSR4-204ENST00000370087 GBA2Q9HCG7 927 aaPredicted RBP20.24■□□□□ 0.83
SSR4-204ENST00000370087 POLLQ9UGP5 575 aa20.24■□□□□ 0.83
SSR4-204ENST00000370087 PSME4Q14997 1843 aa20.24■□□□□ 0.83
SSR4-204ENST00000370087 SOX10P56693 466 aa20.23■□□□□ 0.83
SSR4-204ENST00000370087 GPSM2P81274 684 aa20.23■□□□□ 0.83
SSR4-204ENST00000370087 KIF23Q02241 960 aaPredicted RBP20.23■□□□□ 0.83
SSR4-204ENST00000370087 DOK7Q18PE1 504 aa20.23■□□□□ 0.83
SSR4-204ENST00000370087 ECE2O60344 883 aa20.22■□□□□ 0.83
SSR4-204ENST00000370087 RIPK4P57078 832 aa20.22■□□□□ 0.83
SSR4-204ENST00000370087 WASHC4Q2M389 1173 aa20.22■□□□□ 0.83
SSR4-204ENST00000370087 RBM26Q5T8P6 1007 aaKnown RBP20.22■□□□□ 0.83
SSR4-204ENST00000370087 NSFL1CQ9UNZ2 370 aaKnown RBP20.22■□□□□ 0.83
SSR4-204ENST00000370087 TMC4Q7Z404 712 aa20.21■□□□□ 0.83
SSR4-204ENST00000370087 RNF186Q9NXI6 227 aa20.21■□□□□ 0.83
SSR4-204ENST00000370087 SAGE1Q9NXZ1 904 aa20.21■□□□□ 0.83
SSR4-204ENST00000370087 CHPF2Q9P2E5 772 aa20.21■□□□□ 0.83
SSR4-204ENST00000370087 PDE4DIPQ5VU43 2346 aa20.21■□□□□ 0.83
SSR4-204ENST00000370087 FAM89AQ96GI7 184 aa20.2■□□□□ 0.82
SSR4-204ENST00000370087 C6orf229H3BNL8 230 aa20.19■□□□□ 0.82
SSR4-204ENST00000370087 TRPA1O75762 1119 aa20.19■□□□□ 0.82
SSR4-204ENST00000370087 SLC10A3P09131 477 aa20.19■□□□□ 0.82
SSR4-204ENST00000370087 ZNF157P51786 506 aaPredicted RBP20.19■□□□□ 0.82
SSR4-204ENST00000370087 KIF4BQ2VIQ3 1234 aa20.19■□□□□ 0.82
SSR4-204ENST00000370087 C2orf69Q8N8R5 385 aa20.19■□□□□ 0.82
SSR4-204ENST00000370087 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
SSR4-204ENST00000370087 BABAM1Q9NWV8 329 aa20.19■□□□□ 0.82
SSR4-204ENST00000370087 GGA3Q9NZ52 723 aa20.19■□□□□ 0.82
SSR4-204ENST00000370087 ZNF646O15015 1829 aaPredicted RBP20.18■□□□□ 0.82
SSR4-204ENST00000370087 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms