RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ATG9AQ7Z3C6 839 aa20.59■□□□□ 0.89
PHGDH-202ENST00000369409 TTLL11Q8NHH1 800 aa20.59■□□□□ 0.89
PHGDH-202ENST00000369409 GPATCH3Q96I76 525 aa20.59■□□□□ 0.89
PHGDH-202ENST00000369409 CCDC8Q9H0W5 538 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-202ENST00000369409 TLR7Q9NYK1 1049 aaKnown RBP20.59■□□□□ 0.89
PHGDH-202ENST00000369409 LRP5O75197 1615 aa20.58■□□□□ 0.89
PHGDH-202ENST00000369409 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.89
PHGDH-202ENST00000369409 PHF14O94880 888 aa20.58■□□□□ 0.89
PHGDH-202ENST00000369409 BCL2L12Q9HB09 334 aa20.58■□□□□ 0.89
PHGDH-202ENST00000369409 EYA2O00167 538 aa20.58■□□□□ 0.88
PHGDH-202ENST00000369409 RGL2O15211 777 aa20.58■□□□□ 0.88
PHGDH-202ENST00000369409 IFIT5Q13325 482 aaKnown RBP20.58■□□□□ 0.88
PHGDH-202ENST00000369409 LRRC24Q50LG9 513 aa20.58■□□□□ 0.88
PHGDH-202ENST00000369409 SLC27A3Q5K4L6 730 aa20.58■□□□□ 0.88
PHGDH-202ENST00000369409 TBC1D32Q96NH3 1257 aa20.58■□□□□ 0.88
PHGDH-202ENST00000369409 GREM2Q9H772 168 aa20.58■□□□□ 0.88
PHGDH-202ENST00000369409 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.88
PHGDH-202ENST00000369409 ZPR1O75312 459 aa20.57■□□□□ 0.88
PHGDH-202ENST00000369409 HCLS1P14317 486 aaPredicted RBP20.57■□□□□ 0.88
PHGDH-202ENST00000369409 IL15P40933 162 aaPredicted RBP20.57■□□□□ 0.88
PHGDH-202ENST00000369409 TNNI3KQ59H18 835 aa20.57■□□□□ 0.88
PHGDH-202ENST00000369409 TAF7LQ5H9L4 462 aa20.57■□□□□ 0.88
PHGDH-202ENST00000369409 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
PHGDH-202ENST00000369409 RILPL2Q969X0 211 aa20.57■□□□□ 0.88
PHGDH-202ENST00000369409 FPGT-TNNI3KV9GXZ4 949 aa20.57■□□□□ 0.88
PHGDH-202ENST00000369409 CIAO1O76071 339 aa20.56■□□□□ 0.88
PHGDH-202ENST00000369409 ITGA6P23229 1130 aa20.56■□□□□ 0.88
PHGDH-202ENST00000369409 TBC1D9BQ66K14 1250 aa20.56■□□□□ 0.88
PHGDH-202ENST00000369409 POTEAQ6S8J7 498 aa20.56■□□□□ 0.88
PHGDH-202ENST00000369409 BICDL1Q6ZP65 573 aa20.56■□□□□ 0.88
PHGDH-202ENST00000369409 PUS3Q9BZE2 481 aaKnown RBP20.56■□□□□ 0.88
PHGDH-202ENST00000369409 ZNF609O15014 1411 aa20.56■□□□□ 0.88
PHGDH-202ENST00000369409 ERC2O15083 957 aa20.56■□□□□ 0.88
PHGDH-202ENST00000369409 GLRX3O76003 335 aaKnown RBP20.56■□□□□ 0.88
PHGDH-202ENST00000369409 MAP4K4O95819 1239 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-202ENST00000369409 CASC1Q6TDU7 716 aa20.56■□□□□ 0.88
PHGDH-202ENST00000369409 ANKRD18BA2A2Z9 1011 aa20.54■□□□□ 0.88
PHGDH-202ENST00000369409 IPO9Q96P70 1041 aaKnown RBP20.54■□□□□ 0.88
PHGDH-202ENST00000369409 C22orf23Q9BZE7 217 aa20.54■□□□□ 0.88
PHGDH-202ENST00000369409 RIC1Q4ADV7 1423 aa20.54■□□□□ 0.88
PHGDH-202ENST00000369409 TXNRD1Q16881 649 aa20.54■□□□□ 0.88
PHGDH-202ENST00000369409 TRAPPC3LQ5T215 181 aa20.54■□□□□ 0.88
PHGDH-202ENST00000369409 DBNLQ9UJU6 430 aaKnown RBP20.54■□□□□ 0.88
PHGDH-202ENST00000369409 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-202ENST00000369409 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
PHGDH-202ENST00000369409 RFC4P35249 363 aa20.53■□□□□ 0.88
PHGDH-202ENST00000369409 FBXO3Q9UK99 471 aa20.53■□□□□ 0.88
PHGDH-202ENST00000369409 ADRA2BP18089 450 aa20.52■□□□□ 0.87
PHGDH-202ENST00000369409 CNTROBQ8N137 903 aa20.52■□□□□ 0.87
PHGDH-202ENST00000369409 DBNDD2Q9BQY9 259 aa20.52■□□□□ 0.87
PHGDH-202ENST00000369409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.51■□□□□ 0.87
PHGDH-202ENST00000369409 APBA3O96018 575 aa20.51■□□□□ 0.87
PHGDH-202ENST00000369409 HSP90B1P14625 803 aaKnown RBP20.51■□□□□ 0.87
PHGDH-202ENST00000369409 ERFEQ4G0M1 354 aa20.51■□□□□ 0.87
PHGDH-202ENST00000369409 PROM2Q8N271 834 aa20.51■□□□□ 0.87
PHGDH-202ENST00000369409 SETDB2Q96T68 719 aa20.51■□□□□ 0.87
PHGDH-202ENST00000369409 GPR108Q9NPR9 543 aa20.51■□□□□ 0.87
PHGDH-202ENST00000369409 ABCC12Q96J65 1359 aa20.51■□□□□ 0.87
PHGDH-202ENST00000369409 DDRGK1Q96HY6 314 aa20.5■□□□□ 0.87
PHGDH-202ENST00000369409 TAF1P21675 1872 aa20.5■□□□□ 0.87
PHGDH-202ENST00000369409 LDHAL6AQ6ZMR3 332 aa20.5■□□□□ 0.87
PHGDH-202ENST00000369409 CEP126Q9P2H0 1117 aa20.5■□□□□ 0.87
PHGDH-202ENST00000369409 EIF5BO60841 1220 aaKnown RBP20.49■□□□□ 0.87
PHGDH-202ENST00000369409 CHMLP26374 656 aa20.49■□□□□ 0.87
PHGDH-202ENST00000369409 CCDC152Q4G0S7 254 aa20.49■□□□□ 0.87
PHGDH-202ENST00000369409 CNNM1Q9NRU3 951 aa20.49■□□□□ 0.87
PHGDH-202ENST00000369409 COL4A1P02462 1669 aa20.49■□□□□ 0.87
PHGDH-202ENST00000369409 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
PHGDH-202ENST00000369409 A0A1B0GUL6 1792 aa20.49■□□□□ 0.87
PHGDH-202ENST00000369409 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
PHGDH-202ENST00000369409 PLSCR1O15162 318 aa20.48■□□□□ 0.87
PHGDH-202ENST00000369409 SSFA2P28290 1259 aa20.48■□□□□ 0.87
PHGDH-202ENST00000369409 NEUROD6Q96NK8 337 aa20.48■□□□□ 0.87
PHGDH-202ENST00000369409 NYXQ9GZU5 481 aa20.48■□□□□ 0.87
PHGDH-202ENST00000369409 ARAP2Q8WZ64 1704 aa20.48■□□□□ 0.87
PHGDH-202ENST00000369409 A0A1B0GUL7 405 aa20.47■□□□□ 0.87
PHGDH-202ENST00000369409 MSH5O43196 834 aa20.47■□□□□ 0.87
PHGDH-202ENST00000369409 GTF2E1P29083 439 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-202ENST00000369409 NBPF5PQ86XG9 351 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-202ENST00000369409 BOLA2Q9H3K6 86 aa20.47■□□□□ 0.87
PHGDH-202ENST00000369409 RIPOR2Q9Y4F9 1068 aa20.47■□□□□ 0.87
PHGDH-202ENST00000369409 RBM25P49756 843 aaKnown RBP20.47■□□□□ 0.87
PHGDH-202ENST00000369409 TIMM10P62072 90 aa20.47■□□□□ 0.87
PHGDH-202ENST00000369409 METTL24Q5JXM2 366 aa20.47■□□□□ 0.87
PHGDH-202ENST00000369409 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
PHGDH-202ENST00000369409 SEC31BQ9NQW1 1179 aa20.47■□□□□ 0.87
PHGDH-202ENST00000369409 ATP5JP18859 108 aa20.46■□□□□ 0.87
PHGDH-202ENST00000369409 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.87
PHGDH-202ENST00000369409 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
PHGDH-202ENST00000369409 EVI5LQ96CN4 794 aa20.45■□□□□ 0.86
PHGDH-202ENST00000369409 REC8O95072 547 aa20.45■□□□□ 0.86
PHGDH-202ENST00000369409 AKAP2Q9Y2D5 859 aa20.45■□□□□ 0.86
PHGDH-202ENST00000369409 HMGB2P26583 209 aaKnown RBP20.43■□□□□ 0.86
PHGDH-202ENST00000369409 NFIXQ14938 502 aa20.43■□□□□ 0.86
PHGDH-202ENST00000369409 ZNF827Q17R98 1081 aa20.43■□□□□ 0.86
PHGDH-202ENST00000369409 GYS1P13807 737 aa20.43■□□□□ 0.86
PHGDH-202ENST00000369409 SLC10A5Q5PT55 438 aa20.43■□□□□ 0.86
PHGDH-202ENST00000369409 TPTE2Q6XPS3 522 aa20.43■□□□□ 0.86
PHGDH-202ENST00000369409 VGLL2Q8N8G2 317 aa20.43■□□□□ 0.86
PHGDH-202ENST00000369409 MPHOSPH8Q99549 860 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms