RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 C7P10643 843 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 COL6A1P12109 1028 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 CD151P48509 253 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 ANKRD13BQ86YJ7 626 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 SUDS3Q9H7L9 328 aaPredicted RBP11.94□□□□□ -0.5
SCNM1-202ENST00000368905 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 KAT6BQ8WYB5 2073 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
SCNM1-202ENST00000368905 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
SCNM1-202ENST00000368905 AKAP12Q02952 1782 aa11.93□□□□□ -0.5
SCNM1-202ENST00000368905 TAGLNQ01995 201 aaKnown RBP11.93□□□□□ -0.5
SCNM1-202ENST00000368905 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
SCNM1-202ENST00000368905 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
SCNM1-202ENST00000368905 SLIT1O75093 1534 aa11.92□□□□□ -0.5
SCNM1-202ENST00000368905 ATP2B1P20020 1258 aa11.92□□□□□ -0.5
SCNM1-202ENST00000368905 RWDD1Q9H446 243 aaPredicted RBP11.92□□□□□ -0.5
SCNM1-202ENST00000368905 ANKRD33BA6NCL7 494 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 HSD3B2P26439 372 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 NAP1L1P55209 391 aaKnown RBP11.91□□□□□ -0.5
SCNM1-202ENST00000368905 LONRF1Q17RB8 773 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
SCNM1-202ENST00000368905 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 KIF16BQ96L93 1317 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 ADAMTS13Q76LX8 1427 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 DYTNA2CJ06 578 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
SCNM1-202ENST00000368905 NFE2L2Q16236 605 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 ALDH1L2Q3SY69 923 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 SH3D19Q5HYK7 790 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.91□□□□□ -0.5
SCNM1-202ENST00000368905 CCDC102AQ96A19 550 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 GDPD2Q9HCC8 539 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 ODF2LQ9ULJ1 636 aa11.91□□□□□ -0.5
SCNM1-202ENST00000368905 LRRC7Q96NW7 1537 aa11.9□□□□□ -0.5
SCNM1-202ENST00000368905 VIL1P09327 827 aaKnown RBP11.9□□□□□ -0.5
SCNM1-202ENST00000368905 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
SCNM1-202ENST00000368905 EXOSC9Q06265 439 aaKnown RBP11.9□□□□□ -0.5
SCNM1-202ENST00000368905 KRT77Q7Z794 578 aa11.9□□□□□ -0.5
SCNM1-202ENST00000368905 AVENQ9NQS1 362 aaPredicted RBP11.9□□□□□ -0.5
SCNM1-202ENST00000368905 IPO5O00410 1097 aaKnown RBP11.89□□□□□ -0.51
SCNM1-202ENST00000368905 KCNA2P16389 499 aa11.89□□□□□ -0.51
SCNM1-202ENST00000368905 MLLT3P42568 568 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-202ENST00000368905 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
SCNM1-202ENST00000368905 NME9Q86XW9 330 aa11.89□□□□□ -0.51
SCNM1-202ENST00000368905 C8orf48Q96LL4 319 aa11.89□□□□□ -0.51
SCNM1-202ENST00000368905 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
SCNM1-202ENST00000368905 TTF2Q9UNY4 1162 aaKnown RBP11.89□□□□□ -0.51
SCNM1-202ENST00000368905 IFRD1O00458 451 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-202ENST00000368905 FOSP01100 380 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-202ENST00000368905 CCDC70Q6NSX1 233 aa11.89□□□□□ -0.51
SCNM1-202ENST00000368905 ZNF746Q6NUN9 644 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-202ENST00000368905 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
SCNM1-202ENST00000368905 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-202ENST00000368905 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
SCNM1-202ENST00000368905 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
SCNM1-202ENST00000368905 MTA2O94776 668 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 RRM1P23921 792 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 IL13P35225 146 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 HSPA2P54652 639 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 GNAI1P63096 354 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 SKAP1Q86WV1 359 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 LMNTD2Q8IXW0 634 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 TINF2Q9BSI4 451 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 CCDC94Q9BW85 323 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-202ENST00000368905 C22orf23Q9BZE7 217 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
SCNM1-202ENST00000368905 MRPL42Q9Y6G3 142 aaKnown RBP11.88□□□□□ -0.51
SCNM1-202ENST00000368905 MPHOSPH10O00566 681 aaKnown RBP11.87□□□□□ -0.51
SCNM1-202ENST00000368905 HSP90B2PQ58FF3 399 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 ANKLE2Q86XL3 938 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 CHCHD4Q8N4Q1 142 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 PPM1EQ8WY54 764 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 CEP89Q96ST8 783 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 EIF5P55010 431 aaKnown RBP11.87□□□□□ -0.51
SCNM1-202ENST00000368905 ZC3H12AQ5D1E8 599 aaKnown RBP11.87□□□□□ -0.51
SCNM1-202ENST00000368905 ODR4Q5SWX8 454 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 TTC30AQ86WT1 665 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 LZTS1Q9Y250 596 aa11.87□□□□□ -0.51
SCNM1-202ENST00000368905 PTCH1Q13635 1447 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
SCNM1-202ENST00000368905 HSP90AB1P08238 724 aaKnown RBP11.86□□□□□ -0.51
SCNM1-202ENST00000368905 RLBP1P12271 317 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 LTKP29376 864 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 CLK1P49759 484 aaKnown RBP11.86□□□□□ -0.51
SCNM1-202ENST00000368905 FAM160A1Q05DH4 1040 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 IFT88Q13099 833 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 CCSAPQ6IQ19 270 aaPredicted RBP11.86□□□□□ -0.51
SCNM1-202ENST00000368905 UBE2Q1Q7Z7E8 422 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 SSH1Q8WYL5 1049 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 SLC39A13Q96H72 371 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
SCNM1-202ENST00000368905 EMILIN1Q9Y6C2 1016 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 TOPAZ1Q8N9V7 1692 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
SCNM1-202ENST00000368905 PDGFRBP09619 1106 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms