RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 JCADQ9P266 1359 aa9.16□□□□□ -0.94
CD46-207ENST00000367041 DIP2CQ9Y2E4 1556 aa9.16□□□□□ -0.94
CD46-207ENST00000367041 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
CD46-207ENST00000367041 MAP4K4O95819 1239 aaPredicted RBP9.16□□□□□ -0.94
CD46-207ENST00000367041 ADD1P35611 737 aaKnown RBP9.16□□□□□ -0.94
CD46-207ENST00000367041 ARMCX5Q6P1M9 558 aa9.16□□□□□ -0.94
CD46-207ENST00000367041 TRIM65Q6PJ69 517 aa9.16□□□□□ -0.94
CD46-207ENST00000367041 KRBA2Q6ZNG9 492 aa9.16□□□□□ -0.94
CD46-207ENST00000367041 FERMT3Q86UX7 667 aa9.16□□□□□ -0.94
CD46-207ENST00000367041 IL1RAPL2Q9NP60 686 aa9.16□□□□□ -0.94
CD46-207ENST00000367041 CTAGE5O15320 804 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 LARP1Q6PKG0 1096 aaKnown RBP9.15□□□□□ -0.94
CD46-207ENST00000367041 RHPN1Q8TCX5 695 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 TFIP11Q9UBB9 837 aaKnown RBP9.15□□□□□ -0.94
CD46-207ENST00000367041 CASQ1P31415 396 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 MMP14P50281 582 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 EIF4A2Q14240 407 aaKnown RBP9.15□□□□□ -0.94
CD46-207ENST00000367041 CCDC158Q5M9N0 1113 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 CWC27Q6UX04 472 aaKnown RBP9.15□□□□□ -0.94
CD46-207ENST00000367041 SRLQ86TD4 932 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 ENGASEQ8NFI3 743 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 FBXO18Q8NFZ0 1043 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 CHMP4AQ9BY43 222 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 TTC41PQ6P2S7 1318 aa9.15□□□□□ -0.94
CD46-207ENST00000367041 GOLGA6L19H0YKK7 550 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 FLIIQ13045 1269 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 TOB2Q14106 344 aaPredicted RBP9.14□□□□□ -0.95
CD46-207ENST00000367041 ZSCAN26Q16670 478 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 CTR9Q6PD62 1173 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 TMCO3Q6UWJ1 677 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 GOLGA5Q8TBA6 731 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 PLEKHG2Q9H7P9 1386 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 EFCAB8A8MWE9 144 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 TRIM66O15016 1216 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 RRS1Q15050 365 aaKnown RBP9.14□□□□□ -0.95
CD46-207ENST00000367041 PRPF40BQ6NWY9 871 aaKnown RBP9.14□□□□□ -0.95
CD46-207ENST00000367041 MAP4K1Q92918 833 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 SRRTQ9BXP5 876 aaKnown RBP9.14□□□□□ -0.95
CD46-207ENST00000367041 ETF1P62495 437 aaKnown RBP9.14□□□□□ -0.95
CD46-207ENST00000367041 TSGA10IPQ3SY00 556 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 CC2D1AQ6P1N0 951 aaPredicted RBP9.14□□□□□ -0.95
CD46-207ENST00000367041 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 CCDC150Q8NCX0 1101 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 EXOC4Q96A65 974 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 BPIFA3Q9BQP9 254 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 GOLPH3LQ9H4A5 285 aa9.14□□□□□ -0.95
CD46-207ENST00000367041 NPHP1O15259 732 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 RPS6KA5O75582 802 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 OAS2P29728 719 aaKnown RBP9.13□□□□□ -0.95
CD46-207ENST00000367041 TMX1Q9H3N1 280 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 ARGLU1Q9NWB6 273 aaPredicted RBP9.13□□□□□ -0.95
CD46-207ENST00000367041 PARP3Q9Y6F1 533 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 FMN2Q9NZ56 1722 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 GOLGA6L4A6NEF3 574 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 TPM1P09493 284 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 CREB3L3Q68CJ9 461 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 SULT6B1Q6IMI4 303 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 ZCCHC17Q9NP64 241 aaKnown RBP9.13□□□□□ -0.95
CD46-207ENST00000367041 RCOR1Q9UKL0 485 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 NEDD4P46934 1319 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 SEC31AO94979 1220 aaKnown RBP9.13□□□□□ -0.95
CD46-207ENST00000367041 RSRC2Q7L4I2 434 aaKnown RBP9.13□□□□□ -0.95
CD46-207ENST00000367041 FUT8Q9BYC5 575 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 SLC52A1Q9NWF4 448 aa9.13□□□□□ -0.95
CD46-207ENST00000367041 CEP170BQ9Y4F5 1589 aaPredicted RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 POLR3GO15318 223 aaPredicted RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 IFIT2P09913 472 aaKnown RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 DHX8Q14562 1220 aaKnown RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 SMC1AQ14683 1233 aaKnown RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 CCDC191Q8NCU4 936 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 BICD2Q8TD16 824 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 RUFY2Q8WXA3 655 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 MAP2K7O14733 419 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 SLC27A2O14975 620 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 SOX12O15370 315 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 GLRX3O76003 335 aaKnown RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 ANKRD1Q15327 319 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 LRRFIP1Q32MZ4 808 aaKnown RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 ICE2Q659A1 982 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 PPP1R42Q7Z4L9 355 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 MSL3Q8N5Y2 521 aaKnown RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 UBXN4Q92575 508 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 ANO10Q9NW15 660 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 MIS18AQ9NYP9 233 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 DNAI1Q9UI46 699 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 STAG3Q9UJ98 1225 aa9.12□□□□□ -0.95
CD46-207ENST00000367041 RBM8AQ9Y5S9 174 aaKnown RBP9.12□□□□□ -0.95
CD46-207ENST00000367041 MED1Q15648 1581 aaPredicted RBP9.11□□□□□ -0.95
CD46-207ENST00000367041 RPS6KB1P23443 525 aa9.11□□□□□ -0.95
CD46-207ENST00000367041 ZSCAN16Q9H4T2 348 aaPredicted RBP9.11□□□□□ -0.95
CD46-207ENST00000367041 RRP15Q9Y3B9 282 aaKnown RBP9.11□□□□□ -0.95
CD46-207ENST00000367041 OVOS2A0A0J9YW53 1432 aa9.11□□□□□ -0.95
CD46-207ENST00000367041 OVOS2Q6IE36 1432 aa9.11□□□□□ -0.95
CD46-207ENST00000367041 PSME1Q06323 249 aa9.11□□□□□ -0.95
CD46-207ENST00000367041 GPS2Q13227 327 aa9.11□□□□□ -0.95
CD46-207ENST00000367041 GGT6Q6P531 493 aa9.11□□□□□ -0.95
CD46-207ENST00000367041 COG3Q96JB2 828 aa9.11□□□□□ -0.95
CD46-207ENST00000367041 BRMS1Q9HCU9 246 aa9.11□□□□□ -0.95
CD46-207ENST00000367041 ADAM21Q9UKJ8 722 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms