RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 RRAGBQ5VZM2 374 aa19.06■□□□□ 0.64
NID1-202ENST00000366595 DDX54Q8TDD1 881 aaKnown RBP19.06■□□□□ 0.64
NID1-202ENST00000366595 FEZ2Q9UHY8 353 aaPredicted RBP19.06■□□□□ 0.64
NID1-202ENST00000366595 GMNNO75496 209 aa19.06■□□□□ 0.64
NID1-202ENST00000366595 CCDC50Q8IVM0 306 aa19.06■□□□□ 0.64
NID1-202ENST00000366595 ECHDC1Q9NTX5 307 aa19.06■□□□□ 0.64
NID1-202ENST00000366595 CABP1Q9NZU7 370 aa19.06■□□□□ 0.64
NID1-202ENST00000366595 USH1CQ9Y6N9 552 aa19.06■□□□□ 0.64
NID1-202ENST00000366595 TNNC1P63316 161 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 CCDC63Q8NA47 563 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 SYNCQ9H7C4 482 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 CWC25Q9NXE8 425 aaPredicted RBP19.05■□□□□ 0.64
NID1-202ENST00000366595 RTEL1-TNFRSF6BF6WH68 1400 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 METAP2P50579 478 aaKnown RBP eCLIP19.05■□□□□ 0.64
NID1-202ENST00000366595 IFIT5Q13325 482 aaKnown RBP19.05■□□□□ 0.64
NID1-202ENST00000366595 CCDC186Q7Z3E2 898 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 VCX3BQ9H321 246 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 LDHCP07864 332 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 TMEM67Q5HYA8 995 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 NCOA7Q8NI08 942 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 ZFP91Q96JP5 570 aaPredicted RBP19.05■□□□□ 0.64
NID1-202ENST00000366595 NKTRP30414 1462 aaKnown RBP19.05■□□□□ 0.64
NID1-202ENST00000366595 CCDC14Q49A88 953 aa19.05■□□□□ 0.64
NID1-202ENST00000366595 GIGYF1O75420 1035 aaPredicted RBP19.04■□□□□ 0.64
NID1-202ENST00000366595 PDE4BQ07343 736 aa19.04■□□□□ 0.64
NID1-202ENST00000366595 NEK1Q96PY6 1258 aa19.04■□□□□ 0.64
NID1-202ENST00000366595 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.04■□□□□ 0.642e-6■■□□□ 13.2
NID1-202ENST00000366595 CCT2P78371 535 aaKnown RBP19.04■□□□□ 0.64
NID1-202ENST00000366595 MRPS27Q92552 414 aaKnown RBP19.04■□□□□ 0.64
NID1-202ENST00000366595 PTPRCP08575 1304 aa19.04■□□□□ 0.64
NID1-202ENST00000366595 RARSP54136 660 aaKnown RBP19.04■□□□□ 0.64
NID1-202ENST00000366595 NAA25Q14CX7 972 aa19.04■□□□□ 0.64
NID1-202ENST00000366595 HDXQ7Z353 690 aa19.04■□□□□ 0.64
NID1-202ENST00000366595 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
NID1-202ENST00000366595 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.04■□□□□ 0.645e-37■■■□□ 15.2
NID1-202ENST00000366595 VPS18Q9P253 973 aa19.04■□□□□ 0.64
NID1-202ENST00000366595 ATP11AP98196 1134 aa19.04■□□□□ 0.64
NID1-202ENST00000366595 PROSER2Q86WR7 435 aaPredicted RBP19.04■□□□□ 0.64
NID1-202ENST00000366595 CASQ2O14958 399 aaPredicted RBP19.03■□□□□ 0.64
NID1-202ENST00000366595 ARL1P40616 181 aaPredicted RBP19.03■□□□□ 0.64
NID1-202ENST00000366595 INTS8Q75QN2 995 aaKnown RBP19.03■□□□□ 0.64
NID1-202ENST00000366595 CFAP58Q5T655 872 aa19.03■□□□□ 0.64
NID1-202ENST00000366595 PSMD1Q99460 953 aa19.03■□□□□ 0.64
NID1-202ENST00000366595 MPHOSPH6Q99547 160 aaKnown RBP19.03■□□□□ 0.64
NID1-202ENST00000366595 TUBB2AQ13885 445 aa19.03■□□□□ 0.64
NID1-202ENST00000366595 CEP120Q8N960 986 aa19.03■□□□□ 0.64
NID1-202ENST00000366595 TUBB2BQ9BVA1 445 aa19.03■□□□□ 0.64
NID1-202ENST00000366595 KAT14Q9H8E8 782 aa19.03■□□□□ 0.64
NID1-202ENST00000366595 SPINK5Q9NQ38 1064 aaPredicted RBP19.03■□□□□ 0.64
NID1-202ENST00000366595 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
NID1-202ENST00000366595 SMARCA5O60264 1052 aaPredicted RBP19.03■□□□□ 0.64
NID1-202ENST00000366595 SYT1P21579 422 aa19.03■□□□□ 0.64
NID1-202ENST00000366595 TXNDC16Q9P2K2 825 aa19.03■□□□□ 0.64
NID1-202ENST00000366595 MRPS9P82933 396 aaKnown RBP19.02■□□□□ 0.64
NID1-202ENST00000366595 TXNDC2Q86VQ3 553 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 CCDC144CPQ8IYA2 1237 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 CCDC82Q8N4S0 544 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 GDPD2Q9HCC8 539 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 ANO6Q4KMQ2 910 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 GSTA5Q7RTV2 222 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 TMTC2Q8N394 836 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 TMEM87AQ8NBN3 555 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 ANKRD24Q8TF21 1146 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 SMC1BQ8NDV3 1235 aa19.02■□□□□ 0.64
NID1-202ENST00000366595 UTP14AQ9BVJ6 771 aaKnown RBP19.02■□□□□ 0.64
NID1-202ENST00000366595 NKIRAS1Q9NYS0 192 aa19.02■□□□□ 0.63
NID1-202ENST00000366595 LRRC9Q6ZRR7 1453 aa19.02■□□□□ 0.63
NID1-202ENST00000366595 CFAP157Q5JU67 520 aa19.01■□□□□ 0.63
NID1-202ENST00000366595 ERCC6LQ2NKX8 1250 aa19.01■□□□□ 0.63
NID1-202ENST00000366595 CROCCP2Q86T23 111 aa19.01■□□□□ 0.63
NID1-202ENST00000366595 SMAP1Q8IYB5 467 aaPredicted RBP19.01■□□□□ 0.63
NID1-202ENST00000366595 MSANTD4Q8NCY6 345 aa19.01■□□□□ 0.63
NID1-202ENST00000366595 CCDC42Q96M95 316 aa19.01■□□□□ 0.63
NID1-202ENST00000366595 TBC1D32Q96NH3 1257 aa19.01■□□□□ 0.63
NID1-202ENST00000366595 STAT6P42226 847 aa19.01■□□□□ 0.63
NID1-202ENST00000366595 SEC62Q99442 399 aaKnown RBP19.01■□□□□ 0.63
NID1-202ENST00000366595 TSGA10Q9BZW7 698 aa19.01■□□□□ 0.63
NID1-202ENST00000366595 SH3BGRP55822 239 aaPredicted RBP19■□□□□ 0.63
NID1-202ENST00000366595 GIMAP6Q6P9H5 292 aa19■□□□□ 0.63
NID1-202ENST00000366595 MTUS1Q9ULD2 1270 aa19■□□□□ 0.63
NID1-202ENST00000366595 SARNPP82979 210 aaKnown RBP19■□□□□ 0.63
NID1-202ENST00000366595 CALCOCO2Q13137 446 aa19■□□□□ 0.63
NID1-202ENST00000366595 KCNH5Q8NCM2 988 aa19■□□□□ 0.63
NID1-202ENST00000366595 RBM27Q9P2N5 1060 aaKnown RBP19■□□□□ 0.63
NID1-202ENST00000366595 LRPPRCP42704 1394 aaKnown RBP19■□□□□ 0.63
NID1-202ENST00000366595 BICDL2A1A5D9 508 aa19■□□□□ 0.63
NID1-202ENST00000366595 ARID4AP29374 1257 aaPredicted RBP19■□□□□ 0.63
NID1-202ENST00000366595 MFSD6Q6ZSS7 791 aa19■□□□□ 0.63
NID1-202ENST00000366595 BICD1Q96G01 975 aa19■□□□□ 0.63
NID1-202ENST00000366595 ZEB2O60315 1214 aa18.99■□□□□ 0.63
NID1-202ENST00000366595 TBC1D9Q6ZT07 1266 aa18.99■□□□□ 0.63
NID1-202ENST00000366595 SSH1Q8WYL5 1049 aa18.99■□□□□ 0.63
NID1-202ENST00000366595 IMPG2Q9BZV3 1241 aa18.99■□□□□ 0.63
NID1-202ENST00000366595 NEDD9Q14511 834 aa18.99■□□□□ 0.63
NID1-202ENST00000366595 TSNAXIP1Q2TAA8 658 aa18.99■□□□□ 0.63
NID1-202ENST00000366595 TAF7Q15545 349 aaPredicted RBP18.99■□□□□ 0.63
NID1-202ENST00000366595 AMOTQ4VCS5 1084 aa18.99■□□□□ 0.63
NID1-202ENST00000366595 SLC52A1Q9NWF4 448 aa18.99■□□□□ 0.63
NID1-202ENST00000366595 GBP1P32455 592 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms