RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.25
SNX6-201ENST00000362031 MTX1Q13505 466 aa13.46□□□□□ -0.25
SNX6-201ENST00000362031 SEC31BQ9NQW1 1179 aa13.46□□□□□ -0.25
SNX6-201ENST00000362031 PPP4R2Q9NY27 417 aa13.46□□□□□ -0.25
SNX6-201ENST00000362031 ANKRD31Q8N7Z5 1873 aa13.46□□□□□ -0.25
SNX6-201ENST00000362031 POLA2Q14181 598 aa13.46□□□□□ -0.26
SNX6-201ENST00000362031 ERICH6BQ5W0A0 696 aa13.46□□□□□ -0.26
SNX6-201ENST00000362031 ERICH6Q7L0X2 663 aa13.46□□□□□ -0.26
SNX6-201ENST00000362031 SSH3Q8TE77 659 aa13.46□□□□□ -0.26
SNX6-201ENST00000362031 ZNF594Q96JF6 807 aaPredicted RBP13.46□□□□□ -0.26
SNX6-201ENST00000362031 LAMB2P55268 1798 aa13.46□□□□□ -0.26
SNX6-201ENST00000362031 NPHP1O15259 732 aa13.45□□□□□ -0.26
SNX6-201ENST00000362031 AAMPQ13685 434 aa13.45□□□□□ -0.26
SNX6-201ENST00000362031 RPAP2Q8IXW5 612 aaPredicted RBP13.45□□□□□ -0.26
SNX6-201ENST00000362031 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
SNX6-201ENST00000362031 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
SNX6-201ENST00000362031 MYH3P11055 1940 aa13.45□□□□□ -0.26
SNX6-201ENST00000362031 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
SNX6-201ENST00000362031 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.44□□□□□ -0.26
SNX6-201ENST00000362031 HDAC1Q13547 482 aaPredicted RBP13.44□□□□□ -0.26
SNX6-201ENST00000362031 SKAP1Q86WV1 359 aa13.44□□□□□ -0.26
SNX6-201ENST00000362031 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
SNX6-201ENST00000362031 ITGA6P23229 1130 aa13.43□□□□□ -0.26
SNX6-201ENST00000362031 ST5P78524 1137 aa13.43□□□□□ -0.26
SNX6-201ENST00000362031 PTPN12Q05209 780 aaKnown RBP13.43□□□□□ -0.26
SNX6-201ENST00000362031 SF3B3Q15393 1217 aaKnown RBP13.43□□□□□ -0.26
SNX6-201ENST00000362031 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
SNX6-201ENST00000362031 NLRP3Q96P20 1036 aa13.43□□□□□ -0.26
SNX6-201ENST00000362031 PUS3Q9BZE2 481 aaKnown RBP13.43□□□□□ -0.26
SNX6-201ENST00000362031 KLRG2A4D1S0 409 aaPredicted RBP13.42□□□□□ -0.26
SNX6-201ENST00000362031 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
SNX6-201ENST00000362031 BRIP1Q9BX63 1249 aa13.42□□□□□ -0.26
SNX6-201ENST00000362031 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
SNX6-201ENST00000362031 SIL1Q9H173 461 aa13.42□□□□□ -0.26
SNX6-201ENST00000362031 CHRNA5P30532 468 aa13.41□□□□□ -0.26
SNX6-201ENST00000362031 LRRC24Q50LG9 513 aa13.41□□□□□ -0.26
SNX6-201ENST00000362031 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
SNX6-201ENST00000362031 C10orf71Q711Q0 1435 aa13.41□□□□□ -0.26
SNX6-201ENST00000362031 COL11A2P13942 1736 aaPredicted RBP13.41□□□□□ -0.26
SNX6-201ENST00000362031 APBB1O00213 710 aa13.4□□□□□ -0.26
SNX6-201ENST00000362031 DCTPP1Q9H773 170 aa13.4□□□□□ -0.26
SNX6-201ENST00000362031 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
SNX6-201ENST00000362031 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
SNX6-201ENST00000362031 SRGNP10124 158 aa13.4□□□□□ -0.26
SNX6-201ENST00000362031 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
SNX6-201ENST00000362031 CCDC57Q2TAC2 916 aa13.4□□□□□ -0.26
SNX6-201ENST00000362031 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
SNX6-201ENST00000362031 ATG9AQ7Z3C6 839 aa13.4□□□□□ -0.26
SNX6-201ENST00000362031 RWDD1Q9H446 243 aaPredicted RBP13.4□□□□□ -0.26
SNX6-201ENST00000362031 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
SNX6-201ENST00000362031 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
SNX6-201ENST00000362031 WTIPA6NIX2 430 aaPredicted RBP13.39□□□□□ -0.27
SNX6-201ENST00000362031 SMARCA5O60264 1052 aaPredicted RBP13.39□□□□□ -0.27
SNX6-201ENST00000362031 POLD1P28340 1107 aa13.39□□□□□ -0.27
SNX6-201ENST00000362031 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
SNX6-201ENST00000362031 RTL9Q8NET4 1388 aa13.38□□□□□ -0.27
SNX6-201ENST00000362031 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
SNX6-201ENST00000362031 ANKRD18BA2A2Z9 1011 aa13.38□□□□□ -0.27
SNX6-201ENST00000362031 SASH1O94885 1247 aa13.38□□□□□ -0.27
SNX6-201ENST00000362031 KCNA3P22001 575 aa13.38□□□□□ -0.27
SNX6-201ENST00000362031 BCL11AQ9H165 835 aa13.38□□□□□ -0.27
SNX6-201ENST00000362031 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
SNX6-201ENST00000362031 NOP58Q9Y2X3 529 aaKnown RBP13.38□□□□□ -0.27
SNX6-201ENST00000362031 HMMRO75330 724 aa13.37□□□□□ -0.27
SNX6-201ENST00000362031 HOXA10P31260 410 aaPredicted RBP13.37□□□□□ -0.27
SNX6-201ENST00000362031 OLFM4Q6UX06 510 aa13.37□□□□□ -0.27
SNX6-201ENST00000362031 C2CD5Q86YS7 1000 aa13.37□□□□□ -0.27
SNX6-201ENST00000362031 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
SNX6-201ENST00000362031 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
SNX6-201ENST00000362031 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
SNX6-201ENST00000362031 SNAP23O00161 211 aa13.37□□□□□ -0.27
SNX6-201ENST00000362031 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
SNX6-201ENST00000362031 PDE6BP35913 854 aa13.37□□□□□ -0.27
SNX6-201ENST00000362031 RIPOR2Q9Y4F9 1068 aa13.37□□□□□ -0.27
SNX6-201ENST00000362031 KIF13BQ9NQT8 1826 aa13.36□□□□□ -0.27
SNX6-201ENST00000362031 KIAA1551Q9HCM1 1747 aa13.36□□□□□ -0.27
SNX6-201ENST00000362031 DPEP1P16444 411 aa13.36□□□□□ -0.27
SNX6-201ENST00000362031 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
SNX6-201ENST00000362031 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
SNX6-201ENST00000362031 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
SNX6-201ENST00000362031 RPGRQ92834 1020 aaKnown RBP13.36□□□□□ -0.27
SNX6-201ENST00000362031 EYA2O00167 538 aa13.35□□□□□ -0.27
SNX6-201ENST00000362031 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
SNX6-201ENST00000362031 LDHAL6AQ6ZMR3 332 aa13.35□□□□□ -0.27
SNX6-201ENST00000362031 C16orf71Q8IYS4 520 aaPredicted RBP13.35□□□□□ -0.27
SNX6-201ENST00000362031 NLGN2Q8NFZ4 835 aa13.35□□□□□ -0.27
SNX6-201ENST00000362031 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
SNX6-201ENST00000362031 LRP5O75197 1615 aa13.35□□□□□ -0.27
SNX6-201ENST00000362031 TFCP2Q12800 502 aa13.35□□□□□ -0.27
SNX6-201ENST00000362031 GRAPQ13588 217 aa13.35□□□□□ -0.27
SNX6-201ENST00000362031 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
SNX6-201ENST00000362031 CENPQQ7L2Z9 268 aaPredicted RBP13.35□□□□□ -0.27
SNX6-201ENST00000362031 GRAPLQ8TC17 118 aaPredicted RBP13.35□□□□□ -0.27
SNX6-201ENST00000362031 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
SNX6-201ENST00000362031 ZNF622Q969S3 477 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■■□□□ 11.4
SNX6-201ENST00000362031 H0YIN7 160 aa13.34□□□□□ -0.27
SNX6-201ENST00000362031 TAF5LO75529 589 aa13.34□□□□□ -0.27
SNX6-201ENST00000362031 NPR1P16066 1061 aa13.34□□□□□ -0.27
SNX6-201ENST00000362031 ANKRD45Q5TZF3 282 aa13.34□□□□□ -0.27
SNX6-201ENST00000362031 ANKRD18AQ8IVF6 992 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms