RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 DDX60Q8IY21 1712 aaKnown RBP22.3■■□□□ 1.16
CCDC7-203ENST00000362006 RGS3P49796 1198 aa22.3■■□□□ 1.16
CCDC7-203ENST00000362006 FBXO3Q9UK99 471 aa22.3■■□□□ 1.16
CCDC7-203ENST00000362006 IFIT5Q13325 482 aaKnown RBP22.29■■□□□ 1.16
CCDC7-203ENST00000362006 ERFEQ4G0M1 354 aa22.29■■□□□ 1.16
CCDC7-203ENST00000362006 NUTM1Q86Y26 1132 aa22.29■■□□□ 1.16
CCDC7-203ENST00000362006 PA2G4Q9UQ80 394 aaKnown RBP22.29■■□□□ 1.16
CCDC7-203ENST00000362006 APBB1O00213 710 aa22.28■■□□□ 1.16
CCDC7-203ENST00000362006 HCLS1P14317 486 aaPredicted RBP22.28■■□□□ 1.16
CCDC7-203ENST00000362006 RHPN1Q8TCX5 695 aa22.28■■□□□ 1.16
CCDC7-203ENST00000362006 ANO8Q9HCE9 1232 aaPredicted RBP22.28■■□□□ 1.16
CCDC7-203ENST00000362006 CCDC152Q4G0S7 254 aa22.28■■□□□ 1.16
CCDC7-203ENST00000362006 RTL9Q8NET4 1388 aa22.27■■□□□ 1.16
CCDC7-203ENST00000362006 ANKRD18BA2A2Z9 1011 aa22.27■■□□□ 1.15
CCDC7-203ENST00000362006 NPHP1O15259 732 aa22.26■■□□□ 1.15
CCDC7-203ENST00000362006 PDE4AP27815 886 aa22.26■■□□□ 1.15
CCDC7-203ENST00000362006 SF3B3Q15393 1217 aaKnown RBP22.26■■□□□ 1.15
CCDC7-203ENST00000362006 FAM161AQ3B820 660 aa22.26■■□□□ 1.15
CCDC7-203ENST00000362006 CIAO1O76071 339 aa22.25■■□□□ 1.15
CCDC7-203ENST00000362006 TAF7LQ5H9L4 462 aa22.25■■□□□ 1.15
CCDC7-203ENST00000362006 SKAP1Q86WV1 359 aa22.25■■□□□ 1.15
CCDC7-203ENST00000362006 CNBD1Q8NA66 436 aa22.25■■□□□ 1.15
CCDC7-203ENST00000362006 SMARCA5O60264 1052 aaPredicted RBP22.25■■□□□ 1.15
CCDC7-203ENST00000362006 ITGA6P23229 1130 aa22.25■■□□□ 1.15
CCDC7-203ENST00000362006 NLRP3Q96P20 1036 aa22.25■■□□□ 1.15
CCDC7-203ENST00000362006 GREM2Q9H772 168 aa22.25■■□□□ 1.15
CCDC7-203ENST00000362006 RIC1Q4ADV7 1423 aa22.25■■□□□ 1.15
CCDC7-203ENST00000362006 SERPINB2P05120 415 aa22.24■■□□□ 1.15
CCDC7-203ENST00000362006 KLHDC4Q8TBB5 520 aa22.24■■□□□ 1.15
CCDC7-203ENST00000362006 SIL1Q9H173 461 aa22.24■■□□□ 1.15
CCDC7-203ENST00000362006 EYA2O00167 538 aa22.24■■□□□ 1.15
CCDC7-203ENST00000362006 IL15P40933 162 aaPredicted RBP22.24■■□□□ 1.15
CCDC7-203ENST00000362006 CLASRPQ8N2M8 674 aaKnown RBP22.23■■□□□ 1.15
CCDC7-203ENST00000362006 POLRMTO00411 1230 aaKnown RBP22.22■■□□□ 1.15
CCDC7-203ENST00000362006 ST5P78524 1137 aa22.22■■□□□ 1.15
CCDC7-203ENST00000362006 UPF1Q92900 1129 aaKnown RBP eCLIP22.22■■□□□ 1.15
CCDC7-203ENST00000362006 SASH1O94885 1247 aa22.22■■□□□ 1.15
CCDC7-203ENST00000362006 CCDC85AQ96PX6 553 aaPredicted RBP22.22■■□□□ 1.15
CCDC7-203ENST00000362006 ABCC12Q96J65 1359 aa22.22■■□□□ 1.15
CCDC7-203ENST00000362006 PRR5LQ6MZQ0 368 aa22.21■■□□□ 1.15
CCDC7-203ENST00000362006 IL1RAPL2Q9NP60 686 aa22.21■■□□□ 1.15
CCDC7-203ENST00000362006 DDR1Q08345 913 aa22.2■■□□□ 1.14
CCDC7-203ENST00000362006 PLEKHM2Q8IWE5 1019 aa22.2■■□□□ 1.14
CCDC7-203ENST00000362006 ZNF594Q96JF6 807 aaPredicted RBP22.2■■□□□ 1.14
CCDC7-203ENST00000362006 CDC5LQ99459 802 aaKnown RBP22.2■■□□□ 1.14
CCDC7-203ENST00000362006 ATG9AQ7Z3C6 839 aa22.19■■□□□ 1.14
CCDC7-203ENST00000362006 C16orf71Q8IYS4 520 aaPredicted RBP22.19■■□□□ 1.14
CCDC7-203ENST00000362006 SLC16A10Q8TF71 515 aa22.19■■□□□ 1.14
CCDC7-203ENST00000362006 PARP3Q9Y6F1 533 aa22.19■■□□□ 1.14
CCDC7-203ENST00000362006 LDHAL6AQ6ZMR3 332 aa22.19■■□□□ 1.14
CCDC7-203ENST00000362006 OSBPL3Q9H4L5 887 aa22.19■■□□□ 1.14
CCDC7-203ENST00000362006 GPR108Q9NPR9 543 aa22.19■■□□□ 1.14
CCDC7-203ENST00000362006 CASZ1Q86V15 1759 aa22.18■■□□□ 1.14
CCDC7-203ENST00000362006 NRXN2Q9P2S2 1712 aa22.18■■□□□ 1.14
CCDC7-203ENST00000362006 IGHMBP2P38935 993 aaKnown RBP22.17■■□□□ 1.14
CCDC7-203ENST00000362006 CEP126Q9P2H0 1117 aa22.17■■□□□ 1.14
CCDC7-203ENST00000362006 SALL3Q9BXA9 1300 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 MMP10P09238 476 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 IFIT2P09913 472 aaKnown RBP22.16■■□□□ 1.14
CCDC7-203ENST00000362006 TFCP2Q12800 502 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 LRRC24Q50LG9 513 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 MPHOSPH8Q99549 860 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 CNNM1Q9NRU3 951 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 STAP2Q9UGK3 403 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 AOX1Q06278 1338 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 MX1P20591 662 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 PUS3Q9BZE2 481 aaKnown RBP22.16■■□□□ 1.14
CCDC7-203ENST00000362006 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 RIPOR2Q9Y4F9 1068 aa22.16■■□□□ 1.14
CCDC7-203ENST00000362006 PDE1AP54750 535 aa22.15■■□□□ 1.14
CCDC7-203ENST00000362006 C3orf67Q6ZVT6 689 aa22.15■■□□□ 1.14
CCDC7-203ENST00000362006 SEC31BQ9NQW1 1179 aa22.15■■□□□ 1.14
CCDC7-203ENST00000362006 AKAP2Q9Y2D5 859 aa22.15■■□□□ 1.14
CCDC7-203ENST00000362006 AACSQ86V21 672 aa22.15■■□□□ 1.14
CCDC7-203ENST00000362006 GPATCH3Q96I76 525 aa22.15■■□□□ 1.14
CCDC7-203ENST00000362006 LRP5O75197 1615 aa22.15■■□□□ 1.14
CCDC7-203ENST00000362006 MROH5Q6ZUA9 1318 aa22.14■■□□□ 1.14
CCDC7-203ENST00000362006 DDX46Q7L014 1031 aaKnown RBP22.14■■□□□ 1.13
CCDC7-203ENST00000362006 ANKRD18AQ8IVF6 992 aa22.14■■□□□ 1.13
CCDC7-203ENST00000362006 OTUD7AQ8TE49 926 aaPredicted RBP22.14■■□□□ 1.13
CCDC7-203ENST00000362006 TNNI3KQ59H18 835 aa22.13■■□□□ 1.13
CCDC7-203ENST00000362006 BMP2KLQ5H9B9 411 aa22.13■■□□□ 1.13
CCDC7-203ENST00000362006 CCDC24Q8N4L8 307 aa22.13■■□□□ 1.13
CCDC7-203ENST00000362006 EAF2Q96CJ1 260 aaPredicted RBP22.13■■□□□ 1.13
CCDC7-203ENST00000362006 BRIP1Q9BX63 1249 aa22.13■■□□□ 1.13
CCDC7-203ENST00000362006 FPGT-TNNI3KV9GXZ4 949 aa22.13■■□□□ 1.13
CCDC7-203ENST00000362006 TTC41PQ6P2S7 1318 aa22.13■■□□□ 1.13
CCDC7-203ENST00000362006 KLRG2A4D1S0 409 aaPredicted RBP22.12■■□□□ 1.13
CCDC7-203ENST00000362006 CRY2Q49AN0 593 aa22.12■■□□□ 1.13
CCDC7-203ENST00000362006 MSL1Q68DK7 614 aa22.12■■□□□ 1.13
CCDC7-203ENST00000362006 TNRC6CQ9HCJ0 1690 aaKnown RBP22.12■■□□□ 1.13
CCDC7-203ENST00000362006 METTL24Q5JXM2 366 aa22.12■■□□□ 1.13
CCDC7-203ENST00000362006 TTC22Q5TAA0 569 aa22.12■■□□□ 1.13
CCDC7-203ENST00000362006 BSDC1Q9NW68 430 aaPredicted RBP22.12■■□□□ 1.13
CCDC7-203ENST00000362006 ERC2O15083 957 aa22.1■■□□□ 1.13
CCDC7-203ENST00000362006 RPS8P62241 208 aaKnown RBP22.1■■□□□ 1.13
CCDC7-203ENST00000362006 RPGRQ92834 1020 aaKnown RBP22.1■■□□□ 1.13
CCDC7-203ENST00000362006 PDE6BP35913 854 aa22.1■■□□□ 1.13
CCDC7-203ENST00000362006 RBM17Q96I25 401 aaKnown RBP22.1■■□□□ 1.13
CCDC7-203ENST00000362006 ECHDC1Q9NTX5 307 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms