RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TTLL11Q8NHH1 800 aa17.36■□□□□ 0.37
NSMCE1-201ENST00000361439 DDX60Q8IY21 1712 aaKnown RBP17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 CHRNA5P30532 468 aa17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 FOXO4P98177 505 aa17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 RABL6Q3YEC7 729 aaPredicted RBP17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 DDX46Q7L014 1031 aaKnown RBP17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 TTLL6Q8N841 843 aa17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 MEIS3Q99687 375 aa17.35■□□□□ 0.37
NSMCE1-201ENST00000361439 GNAI2P04899 355 aa17.34■□□□□ 0.37
NSMCE1-201ENST00000361439 C3orf67Q6ZVT6 689 aa17.34■□□□□ 0.37
NSMCE1-201ENST00000361439 SUCLG2Q96I99 432 aa17.34■□□□□ 0.37
NSMCE1-201ENST00000361439 TNRC6CQ9HCJ0 1690 aaKnown RBP17.34■□□□□ 0.37
NSMCE1-201ENST00000361439 KIAA1551Q9HCM1 1747 aa17.34■□□□□ 0.37
NSMCE1-201ENST00000361439 BBOX1O75936 387 aa17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 AAMPQ13685 434 aa17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 ZNF622Q969S3 477 aaKnown RBP eCLIP17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 KAZALD1Q96I82 304 aa17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 DLEC1Q9Y238 1755 aa17.33■□□□□ 0.36
NSMCE1-201ENST00000361439 GRAPQ13588 217 aa17.32■□□□□ 0.36
NSMCE1-201ENST00000361439 GRIPAP1Q4V328 841 aa17.32■□□□□ 0.36
NSMCE1-201ENST00000361439 GRAPLQ8TC17 118 aaPredicted RBP17.32■□□□□ 0.36
NSMCE1-201ENST00000361439 CDC5LQ99459 802 aaKnown RBP17.32■□□□□ 0.36
NSMCE1-201ENST00000361439 BICC1Q9H694 974 aaKnown RBP17.32■□□□□ 0.36
NSMCE1-201ENST00000361439 MTX1Q13505 466 aa17.31■□□□□ 0.36
NSMCE1-201ENST00000361439 SOGA3Q5TF21 947 aa17.31■□□□□ 0.36
NSMCE1-201ENST00000361439 LMBR1LQ6UX01 489 aa17.31■□□□□ 0.36
NSMCE1-201ENST00000361439 MYH3P11055 1940 aa17.31■□□□□ 0.36
NSMCE1-201ENST00000361439 COL11A2P13942 1736 aaPredicted RBP17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 ITGA6P23229 1130 aa17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 IFIT5Q13325 482 aaKnown RBP17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 CCDC57Q2TAC2 916 aa17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 EPHA10Q5JZY3 1008 aa17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 CC2D2BQ6DHV5 1058 aa17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 GREM2Q9H772 168 aa17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 ZBTB40Q9NUA8 1239 aa17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 LRRFIP2Q9Y608 721 aaKnown RBP17.3■□□□□ 0.36
NSMCE1-201ENST00000361439 ANKRD18BA2A2Z9 1011 aa17.29■□□□□ 0.36
NSMCE1-201ENST00000361439 RPS8P62241 208 aaKnown RBP17.29■□□□□ 0.36
NSMCE1-201ENST00000361439 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
NSMCE1-201ENST00000361439 FAM161AQ3B820 660 aa17.28■□□□□ 0.36
NSMCE1-201ENST00000361439 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
NSMCE1-201ENST00000361439 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
NSMCE1-201ENST00000361439 TMX4Q9H1E5 349 aaPredicted RBP17.28■□□□□ 0.36
NSMCE1-201ENST00000361439 BSDC1Q9NW68 430 aaPredicted RBP17.28■□□□□ 0.36
NSMCE1-201ENST00000361439 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 PPEF1O14829 653 aaPredicted RBP17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 GRIN3BO60391 1043 aa17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 IGHMBP2P38935 993 aaKnown RBP17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 SP8Q8IXZ3 490 aa17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 SEC31BQ9NQW1 1179 aa17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 ATP6V0A2Q9Y487 856 aa17.27■□□□□ 0.36
NSMCE1-201ENST00000361439 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
NSMCE1-201ENST00000361439 CELF1Q92879 486 aaKnown RBP17.26■□□□□ 0.35
NSMCE1-201ENST00000361439 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
NSMCE1-201ENST00000361439 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
NSMCE1-201ENST00000361439 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
NSMCE1-201ENST00000361439 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
NSMCE1-201ENST00000361439 ATP8B2P98198 1209 aa17.24■□□□□ 0.35
NSMCE1-201ENST00000361439 GPR162Q16538 588 aa17.24■□□□□ 0.35
NSMCE1-201ENST00000361439 CCDC93Q567U6 631 aa17.24■□□□□ 0.35
NSMCE1-201ENST00000361439 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
NSMCE1-201ENST00000361439 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
NSMCE1-201ENST00000361439 SSH3Q8TE77 659 aa17.23■□□□□ 0.35
NSMCE1-201ENST00000361439 COPRSQ9NQ92 184 aa17.23■□□□□ 0.35
NSMCE1-201ENST00000361439 ARFGEF1Q9Y6D6 1849 aa17.23■□□□□ 0.35
NSMCE1-201ENST00000361439 GOLGB1Q14789 3259 aaKnown RBP17.22■□□□□ 0.35
NSMCE1-201ENST00000361439 SLX4Q8IY92 1834 aa17.22■□□□□ 0.35
NSMCE1-201ENST00000361439 C21orf2O43822 256 aa17.22■□□□□ 0.35
NSMCE1-201ENST00000361439 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.351e-10■□□□□ 10
NSMCE1-201ENST00000361439 RFX5P48382 616 aaPredicted RBP17.22■□□□□ 0.35
NSMCE1-201ENST00000361439 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
NSMCE1-201ENST00000361439 LDHAL6AQ6ZMR3 332 aa17.22■□□□□ 0.35
NSMCE1-201ENST00000361439 CRBNQ96SW2 442 aa17.22■□□□□ 0.35
NSMCE1-201ENST00000361439 HMMRO75330 724 aa17.21■□□□□ 0.35
NSMCE1-201ENST00000361439 CIAO1O76071 339 aa17.21■□□□□ 0.35
NSMCE1-201ENST00000361439 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
NSMCE1-201ENST00000361439 POLA2Q14181 598 aa17.21■□□□□ 0.35
NSMCE1-201ENST00000361439 PSMD1Q99460 953 aa17.21■□□□□ 0.35
NSMCE1-201ENST00000361439 ANKRD2Q9GZV1 360 aa17.21■□□□□ 0.35
NSMCE1-201ENST00000361439 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
NSMCE1-201ENST00000361439 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.34
NSMCE1-201ENST00000361439 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
NSMCE1-201ENST00000361439 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
NSMCE1-201ENST00000361439 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
NSMCE1-201ENST00000361439 MINPP1Q9UNW1 487 aa17.2■□□□□ 0.34
NSMCE1-201ENST00000361439 MROH5Q6ZUA9 1318 aa17.2■□□□□ 0.34
NSMCE1-201ENST00000361439 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
NSMCE1-201ENST00000361439 MPNDQ8N594 471 aa17.19■□□□□ 0.34
NSMCE1-201ENST00000361439 SUPT20HQ8NEM7 779 aa17.19■□□□□ 0.34
NSMCE1-201ENST00000361439 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms