RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 ATP5JP18859 108 aa25.48■■□□□ 1.67
FAM3A-202ENST00000359889 PTF1AQ7RTS3 328 aa25.48■■□□□ 1.67
FAM3A-202ENST00000359889 TTLL11Q8NHH1 800 aa25.48■■□□□ 1.67
FAM3A-202ENST00000359889 AKAP2Q9Y2D5 859 aa25.48■■□□□ 1.67
FAM3A-202ENST00000359889 ANKRD36CQ5JPF3 1778 aa25.47■■□□□ 1.67
FAM3A-202ENST00000359889 RABEP1Q15276 862 aa25.47■■□□□ 1.67
FAM3A-202ENST00000359889 BCL11BQ9C0K0 894 aaPredicted RBP25.47■■□□□ 1.67
FAM3A-202ENST00000359889 ANO2Q9NQ90 1003 aa25.47■■□□□ 1.67
FAM3A-202ENST00000359889 DBNLQ9UJU6 430 aaKnown RBP25.47■■□□□ 1.67
FAM3A-202ENST00000359889 RPS6KA4O75676 772 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 SUSD4Q5VX71 490 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 BOLA2Q9H3K6 86 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 ITGA6P23229 1130 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 LRRC24Q50LG9 513 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 SYNE4Q8N205 404 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 NEUROD6Q96NK8 337 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 CCDC85AQ96PX6 553 aaPredicted RBP25.46■■□□□ 1.67
FAM3A-202ENST00000359889 KIF2CQ99661 725 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 ANP32EQ9BTT0 268 aa25.46■■□□□ 1.67
FAM3A-202ENST00000359889 FAM196AQ6ZSG2 479 aa25.45■■□□□ 1.66
FAM3A-202ENST00000359889 KIAA1211Q6ZU35 1233 aa25.45■■□□□ 1.66
FAM3A-202ENST00000359889 TUBGCP6Q96RT7 1819 aa25.45■■□□□ 1.66
FAM3A-202ENST00000359889 COL5A3P25940 1745 aaPredicted RBP25.44■■□□□ 1.66
FAM3A-202ENST00000359889 DBNDD2Q9BQY9 259 aa25.44■■□□□ 1.66
FAM3A-202ENST00000359889 ZNF772Q68DY9 489 aaPredicted RBP25.43■■□□□ 1.66
FAM3A-202ENST00000359889 GREM2Q9H772 168 aa25.43■■□□□ 1.66
FAM3A-202ENST00000359889 RTCBQ9Y3I0 505 aaKnown RBP25.43■■□□□ 1.66
FAM3A-202ENST00000359889 NUP98P52948 1817 aa25.43■■□□□ 1.66
FAM3A-202ENST00000359889 SGSM2O43147 1006 aa25.43■■□□□ 1.66
FAM3A-202ENST00000359889 KCNQ4P56696 695 aa25.43■■□□□ 1.66
FAM3A-202ENST00000359889 LDHAL6AQ6ZMR3 332 aa25.43■■□□□ 1.66
FAM3A-202ENST00000359889 PUS3Q9BZE2 481 aaKnown RBP25.43■■□□□ 1.66
FAM3A-202ENST00000359889 BTAF1O14981 1849 aa25.42■■□□□ 1.66
FAM3A-202ENST00000359889 GNPATO15228 680 aa25.42■■□□□ 1.66
FAM3A-202ENST00000359889 KRT27Q7Z3Y8 459 aa25.42■■□□□ 1.66
FAM3A-202ENST00000359889 FSD1Q9BTV5 496 aa25.42■■□□□ 1.66
FAM3A-202ENST00000359889 CNNM1Q9NRU3 951 aa25.42■■□□□ 1.66
FAM3A-202ENST00000359889 FAM177BA6PVY3 158 aa25.41■■□□□ 1.66
FAM3A-202ENST00000359889 HMGB2P26583 209 aaKnown RBP25.41■■□□□ 1.66
FAM3A-202ENST00000359889 CWC27Q6UX04 472 aaKnown RBP25.41■■□□□ 1.66
FAM3A-202ENST00000359889 ZPR1O75312 459 aa25.4■■□□□ 1.66
FAM3A-202ENST00000359889 NARFQ9UHQ1 456 aa25.4■■□□□ 1.66
FAM3A-202ENST00000359889 A0A1B0GUL7 405 aa25.4■■□□□ 1.66
FAM3A-202ENST00000359889 ANAPC15P60006 121 aa25.4■■□□□ 1.66
FAM3A-202ENST00000359889 CCDC152Q4G0S7 254 aa25.4■■□□□ 1.66
FAM3A-202ENST00000359889 NTSR2O95665 410 aa25.39■■□□□ 1.65
FAM3A-202ENST00000359889 METTL24Q5JXM2 366 aa25.39■■□□□ 1.65
FAM3A-202ENST00000359889 GORABQ5T7V8 394 aa25.39■■□□□ 1.65
FAM3A-202ENST00000359889 HAUS7Q99871 368 aa25.39■■□□□ 1.65
FAM3A-202ENST00000359889 ZNF609O15014 1411 aa25.39■■□□□ 1.65
FAM3A-202ENST00000359889 HCLS1P14317 486 aaPredicted RBP25.38■■□□□ 1.65
FAM3A-202ENST00000359889 TIMM10P62072 90 aa25.38■■□□□ 1.65
FAM3A-202ENST00000359889 CCDC158Q5M9N0 1113 aa25.38■■□□□ 1.65
FAM3A-202ENST00000359889 MYH14Q7Z406 1995 aaKnown RBP25.38■■□□□ 1.65
FAM3A-202ENST00000359889 RAD50Q92878 1312 aa25.38■■□□□ 1.65
FAM3A-202ENST00000359889 ST18O60284 1047 aa25.37■■□□□ 1.65
FAM3A-202ENST00000359889 TICAM2Q86XR7 235 aa25.37■■□□□ 1.65
FAM3A-202ENST00000359889 IL27Q8NEV9 243 aa25.37■■□□□ 1.65
FAM3A-202ENST00000359889 RBM6P78332 1123 aaKnown RBP25.37■■□□□ 1.65
FAM3A-202ENST00000359889 RIPOR2Q9Y4F9 1068 aa25.37■■□□□ 1.65
FAM3A-202ENST00000359889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.36■■□□□ 1.65
FAM3A-202ENST00000359889 DNAJC2Q99543 621 aaKnown RBP25.36■■□□□ 1.65
FAM3A-202ENST00000359889 NYXQ9GZU5 481 aa25.36■■□□□ 1.65
FAM3A-202ENST00000359889 RFX7Q2KHR2 1363 aa25.36■■□□□ 1.65
FAM3A-202ENST00000359889 GTF2E1P29083 439 aaPredicted RBP25.35■■□□□ 1.65
FAM3A-202ENST00000359889 USPL1Q5W0Q7 1092 aa25.34■■□□□ 1.65
FAM3A-202ENST00000359889 MROH5Q6ZUA9 1318 aa25.34■■□□□ 1.65
FAM3A-202ENST00000359889 RTL9Q8NET4 1388 aa25.34■■□□□ 1.65
FAM3A-202ENST00000359889 K7ELQ4 463 aaPredicted RBP25.34■■□□□ 1.65
FAM3A-202ENST00000359889 ATP2B3Q16720 1220 aa25.34■■□□□ 1.65
FAM3A-202ENST00000359889 SLC27A3Q5K4L6 730 aa25.34■■□□□ 1.65
FAM3A-202ENST00000359889 SETDB2Q96T68 719 aa25.34■■□□□ 1.65
FAM3A-202ENST00000359889 IFIT1P09914 478 aaKnown RBP25.33■■□□□ 1.65
FAM3A-202ENST00000359889 TTC39AQ5SRH9 613 aa25.33■■□□□ 1.65
FAM3A-202ENST00000359889 TRAPPC3LQ5T215 181 aa25.33■■□□□ 1.65
FAM3A-202ENST00000359889 MPHOSPH8Q99549 860 aa25.33■■□□□ 1.65
FAM3A-202ENST00000359889 HSPA4P34932 840 aa25.32■■□□□ 1.64
FAM3A-202ENST00000359889 RFC4P35249 363 aa25.32■■□□□ 1.64
FAM3A-202ENST00000359889 IGHMBP2P38935 993 aaKnown RBP25.32■■□□□ 1.64
FAM3A-202ENST00000359889 NMIQ13287 307 aaPredicted RBP25.32■■□□□ 1.64
FAM3A-202ENST00000359889 XAGE2Q96GT9 111 aa25.32■■□□□ 1.64
FAM3A-202ENST00000359889 LSG1Q9H089 658 aaKnown RBP25.32■■□□□ 1.64
FAM3A-202ENST00000359889 AK9Q5TCS8 1911 aa25.32■■□□□ 1.64
FAM3A-202ENST00000359889 HSP90AA1P07900 732 aaKnown RBP25.32■■□□□ 1.64
FAM3A-202ENST00000359889 ADRA2BP18089 450 aa25.32■■□□□ 1.64
FAM3A-202ENST00000359889 BICDL1Q6ZP65 573 aa25.32■■□□□ 1.64
FAM3A-202ENST00000359889 SLKQ9H2G2 1235 aaPredicted RBP25.32■■□□□ 1.64
FAM3A-202ENST00000359889 BCORQ6W2J9 1755 aa25.31■■□□□ 1.64
FAM3A-202ENST00000359889 LRRFIP1Q32MZ4 808 aaKnown RBP25.31■■□□□ 1.64
FAM3A-202ENST00000359889 ARHGEF1Q92888 912 aaKnown RBP25.31■■□□□ 1.64
FAM3A-202ENST00000359889 IL25Q9H293 177 aa25.31■■□□□ 1.64
FAM3A-202ENST00000359889 PAG1Q9NWQ8 432 aa25.31■■□□□ 1.64
FAM3A-202ENST00000359889 PDE8BO95263 885 aa25.3■■□□□ 1.64
FAM3A-202ENST00000359889 TBC1D9BQ66K14 1250 aa25.3■■□□□ 1.64
FAM3A-202ENST00000359889 KBTBD3Q8NAB2 608 aa25.3■■□□□ 1.64
FAM3A-202ENST00000359889 IL17RAQ96F46 866 aa25.3■■□□□ 1.64
FAM3A-202ENST00000359889 CDC5LQ99459 802 aaKnown RBP25.3■■□□□ 1.64
FAM3A-202ENST00000359889 BCL2L12Q9HB09 334 aa25.3■■□□□ 1.64
FAM3A-202ENST00000359889 ABCC12Q96J65 1359 aa25.3■■□□□ 1.64
FAM3A-202ENST00000359889 RIC1Q4ADV7 1423 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms