RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 RGS3P49796 1198 aa30.79■■■□□ 2.52
SHARPIN-201ENST00000359551 ERFEQ4G0M1 354 aa30.79■■■□□ 2.52
SHARPIN-201ENST00000359551 TPTE2Q6XPS3 522 aa30.79■■■□□ 2.52
SHARPIN-201ENST00000359551 ZBTB47Q9UFB7 747 aaPredicted RBP30.78■■■□□ 2.52
SHARPIN-201ENST00000359551 APBB1O00213 710 aa30.78■■■□□ 2.52
SHARPIN-201ENST00000359551 FAM161AQ3B820 660 aa30.78■■■□□ 2.52
SHARPIN-201ENST00000359551 ERC1Q8IUD2 1116 aa30.78■■■□□ 2.52
SHARPIN-201ENST00000359551 KLHDC4Q8TBB5 520 aa30.78■■■□□ 2.52
SHARPIN-201ENST00000359551 RHPN1Q8TCX5 695 aa30.78■■■□□ 2.52
SHARPIN-201ENST00000359551 KIF1BPQ96EK5 621 aa30.78■■■□□ 2.52
SHARPIN-201ENST00000359551 ABCC12Q96J65 1359 aa30.77■■■□□ 2.52
SHARPIN-201ENST00000359551 NLGN1Q8N2Q7 840 aa30.77■■■□□ 2.52
SHARPIN-201ENST00000359551 RTL9Q8NET4 1388 aa30.77■■■□□ 2.52
SHARPIN-201ENST00000359551 NRXN2Q9P2S2 1712 aa30.76■■■□□ 2.52
SHARPIN-201ENST00000359551 SMARCA5O60264 1052 aaPredicted RBP30.76■■■□□ 2.51
SHARPIN-201ENST00000359551 CCDC57Q2TAC2 916 aa30.76■■■□□ 2.51
SHARPIN-201ENST00000359551 RIC1Q4ADV7 1423 aa30.76■■■□□ 2.51
SHARPIN-201ENST00000359551 G3BP1Q13283 466 aaKnown RBP eCLIP30.75■■■□□ 2.51
SHARPIN-201ENST00000359551 GREM2Q9H772 168 aa30.75■■■□□ 2.51
SHARPIN-201ENST00000359551 IFIT5Q13325 482 aaKnown RBP30.74■■■□□ 2.51
SHARPIN-201ENST00000359551 LRP5O75197 1615 aa30.74■■■□□ 2.51
SHARPIN-201ENST00000359551 GTF2E1P29083 439 aaPredicted RBP30.74■■■□□ 2.51
SHARPIN-201ENST00000359551 OS9Q13438 667 aaPredicted RBP30.74■■■□□ 2.51
SHARPIN-201ENST00000359551 FBXO3Q9UK99 471 aa30.74■■■□□ 2.51
SHARPIN-201ENST00000359551 MSH5O43196 834 aa30.73■■■□□ 2.51
SHARPIN-201ENST00000359551 SF3B3Q15393 1217 aaKnown RBP30.73■■■□□ 2.51
SHARPIN-201ENST00000359551 SIL1Q9H173 461 aa30.73■■■□□ 2.51
SHARPIN-201ENST00000359551 TNRC6CQ9HCJ0 1690 aaKnown RBP30.73■■■□□ 2.51
SHARPIN-201ENST00000359551 SASH1O94885 1247 aa30.72■■■□□ 2.51
SHARPIN-201ENST00000359551 ITGA6P23229 1130 aa30.72■■■□□ 2.51
SHARPIN-201ENST00000359551 DDR1Q08345 913 aa30.72■■■□□ 2.51
SHARPIN-201ENST00000359551 POLRMTO00411 1230 aaKnown RBP30.71■■■□□ 2.51
SHARPIN-201ENST00000359551 CIAO1O76071 339 aa30.71■■■□□ 2.51
SHARPIN-201ENST00000359551 CCDC152Q4G0S7 254 aa30.71■■■□□ 2.51
SHARPIN-201ENST00000359551 UPF1Q92900 1129 aaKnown RBP eCLIP30.71■■■□□ 2.51
SHARPIN-201ENST00000359551 CCDC85AQ96PX6 553 aaPredicted RBP30.71■■■□□ 2.51
SHARPIN-201ENST00000359551 ANKRD18BA2A2Z9 1011 aa30.71■■■□□ 2.51
SHARPIN-201ENST00000359551 SERPINB2P05120 415 aa30.71■■■□□ 2.51
SHARPIN-201ENST00000359551 CNBD1Q8NA66 436 aa30.71■■■□□ 2.51
SHARPIN-201ENST00000359551 PRR5LQ6MZQ0 368 aa30.7■■■□□ 2.5
SHARPIN-201ENST00000359551 C16orf71Q8IYS4 520 aaPredicted RBP30.7■■■□□ 2.5
SHARPIN-201ENST00000359551 ZNF594Q96JF6 807 aaPredicted RBP30.7■■■□□ 2.5
SHARPIN-201ENST00000359551 EYA2O00167 538 aa30.69■■■□□ 2.5
SHARPIN-201ENST00000359551 ATG9AQ7Z3C6 839 aa30.69■■■□□ 2.5
SHARPIN-201ENST00000359551 SALL3Q9BXA9 1300 aa30.69■■■□□ 2.5
SHARPIN-201ENST00000359551 C3orf67Q6ZVT6 689 aa30.68■■■□□ 2.5
SHARPIN-201ENST00000359551 PLEKHM2Q8IWE5 1019 aa30.68■■■□□ 2.5
SHARPIN-201ENST00000359551 IL1RAPL2Q9NP60 686 aa30.68■■■□□ 2.5
SHARPIN-201ENST00000359551 SPEF2Q9C093 1822 aa30.67■■■□□ 2.5
SHARPIN-201ENST00000359551 IL15P40933 162 aaPredicted RBP30.67■■■□□ 2.5
SHARPIN-201ENST00000359551 NLRP3Q96P20 1036 aa30.67■■■□□ 2.5
SHARPIN-201ENST00000359551 OTUD7AQ8TE49 926 aaPredicted RBP30.66■■■□□ 2.5
SHARPIN-201ENST00000359551 TAF7LQ5H9L4 462 aa30.65■■■□□ 2.5
SHARPIN-201ENST00000359551 CLASRPQ8N2M8 674 aaKnown RBP30.65■■■□□ 2.5
SHARPIN-201ENST00000359551 TAF1P21675 1872 aa30.65■■■□□ 2.5
SHARPIN-201ENST00000359551 ANKRD31Q8N7Z5 1873 aa30.65■■■□□ 2.5
SHARPIN-201ENST00000359551 LRRC24Q50LG9 513 aa30.65■■■□□ 2.5
SHARPIN-201ENST00000359551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.65■■■□□ 2.5
SHARPIN-201ENST00000359551 NPHP1O15259 732 aa30.64■■■□□ 2.5
SHARPIN-201ENST00000359551 PUS3Q9BZE2 481 aaKnown RBP30.64■■■□□ 2.5
SHARPIN-201ENST00000359551 OSBPL3Q9H4L5 887 aa30.64■■■□□ 2.5
SHARPIN-201ENST00000359551 ST5P78524 1137 aa30.63■■■□□ 2.49
SHARPIN-201ENST00000359551 CCDC24Q8N4L8 307 aa30.62■■■□□ 2.49
SHARPIN-201ENST00000359551 SEC31BQ9NQW1 1179 aa30.62■■■□□ 2.49
SHARPIN-201ENST00000359551 COL4A1P02462 1669 aa30.62■■■□□ 2.49
SHARPIN-201ENST00000359551 MMP10P09238 476 aa30.62■■■□□ 2.49
SHARPIN-201ENST00000359551 TFCP2Q12800 502 aa30.62■■■□□ 2.49
SHARPIN-201ENST00000359551 STAP2Q9UGK3 403 aa30.62■■■□□ 2.49
SHARPIN-201ENST00000359551 RIPOR2Q9Y4F9 1068 aa30.62■■■□□ 2.49
SHARPIN-201ENST00000359551 LDHAL6AQ6ZMR3 332 aa30.61■■■□□ 2.49
SHARPIN-201ENST00000359551 GPR108Q9NPR9 543 aa30.61■■■□□ 2.49
SHARPIN-201ENST00000359551 PDE1AP54750 535 aa30.6■■■□□ 2.49
SHARPIN-201ENST00000359551 MX1P20591 662 aa30.59■■■□□ 2.49
SHARPIN-201ENST00000359551 MSL1Q68DK7 614 aa30.59■■■□□ 2.49
SHARPIN-201ENST00000359551 EAF2Q96CJ1 260 aaPredicted RBP30.59■■■□□ 2.49
SHARPIN-201ENST00000359551 CDC5LQ99459 802 aaKnown RBP30.59■■■□□ 2.49
SHARPIN-201ENST00000359551 BCL11AQ9H165 835 aa30.59■■■□□ 2.49
SHARPIN-201ENST00000359551 A0A1B0GUL6 1792 aa30.59■■■□□ 2.49
SHARPIN-201ENST00000359551 SLC16A10Q8TF71 515 aa30.58■■■□□ 2.49
SHARPIN-201ENST00000359551 PARP3Q9Y6F1 533 aa30.58■■■□□ 2.49
SHARPIN-201ENST00000359551 AOX1Q06278 1338 aa30.58■■■□□ 2.49
SHARPIN-201ENST00000359551 CRY2Q49AN0 593 aa30.58■■■□□ 2.49
SHARPIN-201ENST00000359551 TNNI3KQ59H18 835 aa30.57■■■□□ 2.48
SHARPIN-201ENST00000359551 AACSQ86V21 672 aa30.57■■■□□ 2.48
SHARPIN-201ENST00000359551 PDGFDQ9GZP0 370 aaPredicted RBP30.57■■■□□ 2.48
SHARPIN-201ENST00000359551 FPGT-TNNI3KV9GXZ4 949 aa30.57■■■□□ 2.48
SHARPIN-201ENST00000359551 KLRG2A4D1S0 409 aaPredicted RBP30.56■■■□□ 2.48
SHARPIN-201ENST00000359551 BMP2KLQ5H9B9 411 aa30.56■■■□□ 2.48
SHARPIN-201ENST00000359551 CNNM1Q9NRU3 951 aa30.56■■■□□ 2.48
SHARPIN-201ENST00000359551 CEP126Q9P2H0 1117 aa30.56■■■□□ 2.48
SHARPIN-201ENST00000359551 IGHMBP2P38935 993 aaKnown RBP30.55■■■□□ 2.48
SHARPIN-201ENST00000359551 ZNF609O15014 1411 aa30.55■■■□□ 2.48
SHARPIN-201ENST00000359551 IFIT2P09913 472 aaKnown RBP30.55■■■□□ 2.48
SHARPIN-201ENST00000359551 TTC22Q5TAA0 569 aa30.55■■■□□ 2.48
SHARPIN-201ENST00000359551 VGLL2Q8N8G2 317 aa30.54■■■□□ 2.48
SHARPIN-201ENST00000359551 MPHOSPH8Q99549 860 aa30.54■■■□□ 2.48
SHARPIN-201ENST00000359551 BRIP1Q9BX63 1249 aa30.54■■■□□ 2.48
SHARPIN-201ENST00000359551 TTC41PQ6P2S7 1318 aa30.54■■■□□ 2.48
SHARPIN-201ENST00000359551 MROH5Q6ZUA9 1318 aa30.54■■■□□ 2.48
SHARPIN-201ENST00000359551 ANKRD18AQ8IVF6 992 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms