RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
CCDC196-201ENST00000359454 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
CCDC196-201ENST00000359454 PDZRN3Q9UPQ7 1066 aa8.59□□□□□ -1.03
CCDC196-201ENST00000359454 NRXN2Q9P2S2 1712 aa8.59□□□□□ -1.03
CCDC196-201ENST00000359454 MRC1P22897 1456 aa8.58□□□□□ -1.04
CCDC196-201ENST00000359454 A0A087WZG4 1122 aa8.58□□□□□ -1.04
CCDC196-201ENST00000359454 NFKBIEO00221 500 aa8.58□□□□□ -1.04
CCDC196-201ENST00000359454 RNMTO43148 476 aaKnown RBP8.58□□□□□ -1.04
CCDC196-201ENST00000359454 EIF4G2P78344 907 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCDC196-201ENST00000359454 SLC39A6Q13433 755 aa8.58□□□□□ -1.04
CCDC196-201ENST00000359454 TATDN2Q93075 761 aa8.58□□□□□ -1.04
CCDC196-201ENST00000359454 LGR6Q9HBX8 967 aa8.58□□□□□ -1.04
CCDC196-201ENST00000359454 ZBTB1Q9Y2K1 713 aa8.58□□□□□ -1.04
CCDC196-201ENST00000359454 DLEC1Q9Y238 1755 aa8.58□□□□□ -1.04
CCDC196-201ENST00000359454 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
CCDC196-201ENST00000359454 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
CCDC196-201ENST00000359454 LSM11P83369 360 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCDC196-201ENST00000359454 TTLL12Q14166 644 aaPredicted RBP8.57□□□□□ -1.04
CCDC196-201ENST00000359454 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
CCDC196-201ENST00000359454 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
CCDC196-201ENST00000359454 VPS9D1Q9Y2B5 631 aa8.57□□□□□ -1.04
CCDC196-201ENST00000359454 KNSTRNQ9Y448 316 aa8.57□□□□□ -1.04
CCDC196-201ENST00000359454 TIAM2Q8IVF5 1701 aa8.57□□□□□ -1.04
CCDC196-201ENST00000359454 POTECB2RU33 542 aa8.56□□□□□ -1.04
CCDC196-201ENST00000359454 C3orf80F5H4A9 247 aa8.56□□□□□ -1.04
CCDC196-201ENST00000359454 TK2O00142 265 aa8.56□□□□□ -1.04
CCDC196-201ENST00000359454 STARD3NLO95772 234 aa8.56□□□□□ -1.04
CCDC196-201ENST00000359454 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
CCDC196-201ENST00000359454 CANXP27824 592 aaKnown RBP8.56□□□□□ -1.04
CCDC196-201ENST00000359454 PDE6BP35913 854 aa8.56□□□□□ -1.04
CCDC196-201ENST00000359454 BICDL1Q6ZP65 573 aa8.56□□□□□ -1.04
CCDC196-201ENST00000359454 ZNF622Q969S3 477 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCDC196-201ENST00000359454 BRIP1Q9BX63 1249 aa8.56□□□□□ -1.04
CCDC196-201ENST00000359454 CARMIL3Q8ND23 1372 aa8.56□□□□□ -1.04
CCDC196-201ENST00000359454 CLSPNQ9HAW4 1339 aa8.55□□□□□ -1.04
CCDC196-201ENST00000359454 LTBP3Q9NS15 1303 aa8.55□□□□□ -1.04
CCDC196-201ENST00000359454 SMAPO00193 183 aa8.55□□□□□ -1.04
CCDC196-201ENST00000359454 EIF5P55010 431 aaKnown RBP8.55□□□□□ -1.04
CCDC196-201ENST00000359454 MDM2Q00987 491 aaPredicted RBP8.55□□□□□ -1.04
CCDC196-201ENST00000359454 MTHFSDQ2M296 383 aaKnown RBP8.55□□□□□ -1.04
CCDC196-201ENST00000359454 ERFEQ4G0M1 354 aa8.55□□□□□ -1.04
CCDC196-201ENST00000359454 PARP9Q8IXQ6 854 aa8.55□□□□□ -1.04
CCDC196-201ENST00000359454 TTC5Q8N0Z6 440 aa8.55□□□□□ -1.04
CCDC196-201ENST00000359454 NLRP7Q8WX94 980 aa8.55□□□□□ -1.04
CCDC196-201ENST00000359454 TEX13AQ9BXU3 409 aaPredicted RBP8.55□□□□□ -1.04
CCDC196-201ENST00000359454 RCCD1A6NED2 376 aa8.54□□□□□ -1.04
CCDC196-201ENST00000359454 C21orf2O43822 256 aa8.54□□□□□ -1.04
CCDC196-201ENST00000359454 HMOX1P09601 288 aa8.54□□□□□ -1.04
CCDC196-201ENST00000359454 CLCN1P35523 988 aa8.54□□□□□ -1.04
CCDC196-201ENST00000359454 SOGA3Q5TF21 947 aa8.54□□□□□ -1.04
CCDC196-201ENST00000359454 TBC1D9BQ66K14 1250 aa8.54□□□□□ -1.04
CCDC196-201ENST00000359454 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
CCDC196-201ENST00000359454 KDM4CQ9H3R0 1056 aa8.54□□□□□ -1.04
CCDC196-201ENST00000359454 SEPT9Q9UHD8 586 aaPredicted RBP8.54□□□□□ -1.04
CCDC196-201ENST00000359454 CCDC88AQ3V6T2 1871 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 DIAPH1O60610 1272 aaKnown RBP8.53□□□□□ -1.04
CCDC196-201ENST00000359454 DNAJB2P25686 324 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 IL6STP40189 918 aaPredicted RBP8.53□□□□□ -1.04
CCDC196-201ENST00000359454 STYK1Q6J9G0 422 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 PRR5LQ6MZQ0 368 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 ADGRD1Q6QNK2 874 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 NBPF3Q9H094 633 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 MKRN1Q9UHC7 482 aaKnown RBP8.53□□□□□ -1.04
CCDC196-201ENST00000359454 UBR2Q8IWV8 1755 aa8.53□□□□□ -1.04
CCDC196-201ENST00000359454 HEG1Q9ULI3 1381 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 ANKRD31Q8N7Z5 1873 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 IQCA1LA6NCM1 817 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 NPHP1O15259 732 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 ST5P78524 1137 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 TEFQ10587 303 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 GIGYF2Q6Y7W6 1299 aaKnown RBP8.52□□□□□ -1.05
CCDC196-201ENST00000359454 ANKRD13DQ6ZTN6 518 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 NPM2Q86SE8 214 aaKnown RBP8.52□□□□□ -1.05
CCDC196-201ENST00000359454 CNBD1Q8NA66 436 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 ZNF496Q96IT1 587 aaPredicted RBP8.52□□□□□ -1.05
CCDC196-201ENST00000359454 SETDB2Q96T68 719 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 TBC1D2BQ9UPU7 963 aa8.52□□□□□ -1.05
CCDC196-201ENST00000359454 DICER1Q9UPY3 1922 aaKnown RBP8.52□□□□□ -1.05
CCDC196-201ENST00000359454 FER1L6Q2WGJ9 1857 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 SCN7AQ01118 1682 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 DDNO94850 711 aaPredicted RBP8.51□□□□□ -1.05
CCDC196-201ENST00000359454 SRGNP10124 158 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 PRPF40BQ6NWY9 871 aaKnown RBP8.51□□□□□ -1.05
CCDC196-201ENST00000359454 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 LDHDQ86WU2 507 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 CCDC24Q8N4L8 307 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 GAS2L2Q8NHY3 880 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 MASTLQ96GX5 879 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 FMNL2Q96PY5 1086 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
CCDC196-201ENST00000359454 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
CCDC196-201ENST00000359454 ZNF330Q9Y3S2 320 aaPredicted RBP8.51□□□□□ -1.05
CCDC196-201ENST00000359454 VIRMAQ69YN4 1812 aaKnown RBP8.51□□□□□ -1.05
CCDC196-201ENST00000359454 COL11A2P13942 1736 aaPredicted RBP8.51□□□□□ -1.05
CCDC196-201ENST00000359454 CNTNAP1P78357 1384 aa8.5□□□□□ -1.05
CCDC196-201ENST00000359454 GNAT3A8MTJ3 354 aa8.5□□□□□ -1.05
CCDC196-201ENST00000359454 FOXN1O15353 648 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms