RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CASZ1Q86V15 1759 aa16.55■□□□□ 0.24
CCDC197-201ENST00000359253 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
CCDC197-201ENST00000359253 CSF1RP07333 972 aa16.54■□□□□ 0.24
CCDC197-201ENST00000359253 GYS1P13807 737 aa16.54■□□□□ 0.24
CCDC197-201ENST00000359253 GSPT1P15170 499 aaKnown RBP16.54■□□□□ 0.24
CCDC197-201ENST00000359253 PTPN12Q05209 780 aaKnown RBP16.54■□□□□ 0.24
CCDC197-201ENST00000359253 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
CCDC197-201ENST00000359253 CIAO1O76071 339 aa16.53■□□□□ 0.24
CCDC197-201ENST00000359253 IFIT2P09913 472 aaKnown RBP16.53■□□□□ 0.24
CCDC197-201ENST00000359253 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
CCDC197-201ENST00000359253 IPO9Q96P70 1041 aaKnown RBP16.53■□□□□ 0.24
CCDC197-201ENST00000359253 GPR108Q9NPR9 543 aa16.53■□□□□ 0.24
CCDC197-201ENST00000359253 NUP98P52948 1817 aa16.53■□□□□ 0.24
CCDC197-201ENST00000359253 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.24
CCDC197-201ENST00000359253 SDSP20132 328 aa16.52■□□□□ 0.24
CCDC197-201ENST00000359253 IL15P40933 162 aaPredicted RBP16.52■□□□□ 0.24
CCDC197-201ENST00000359253 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.24
CCDC197-201ENST00000359253 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
CCDC197-201ENST00000359253 IL1RAPL2Q9NP60 686 aa16.52■□□□□ 0.24
CCDC197-201ENST00000359253 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
CCDC197-201ENST00000359253 PA2G4Q9UQ80 394 aaKnown RBP16.52■□□□□ 0.24
CCDC197-201ENST00000359253 PDE8AO60658 829 aa16.51■□□□□ 0.23
CCDC197-201ENST00000359253 SASH1O94885 1247 aa16.51■□□□□ 0.23
CCDC197-201ENST00000359253 TM4SF1P30408 202 aa16.51■□□□□ 0.23
CCDC197-201ENST00000359253 USPL1Q5W0Q7 1092 aa16.51■□□□□ 0.23
CCDC197-201ENST00000359253 SEC24BO95487 1268 aa16.5■□□□□ 0.23
CCDC197-201ENST00000359253 TBC1D9Q6ZT07 1266 aa16.5■□□□□ 0.23
CCDC197-201ENST00000359253 FAM89AQ96GI7 184 aa16.5■□□□□ 0.23
CCDC197-201ENST00000359253 TBC1D32Q96NH3 1257 aa16.5■□□□□ 0.23
CCDC197-201ENST00000359253 UTP14AQ9BVJ6 771 aaKnown RBP16.5■□□□□ 0.23
CCDC197-201ENST00000359253 ECHDC1Q9NTX5 307 aa16.5■□□□□ 0.23
CCDC197-201ENST00000359253 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
CCDC197-201ENST00000359253 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
CCDC197-201ENST00000359253 SH3TC1Q8TE82 1336 aa16.49■□□□□ 0.23
CCDC197-201ENST00000359253 IRS4O14654 1257 aaPredicted RBP16.49■□□□□ 0.23
CCDC197-201ENST00000359253 EPB41L2O43491 1005 aaKnown RBP16.49■□□□□ 0.23
CCDC197-201ENST00000359253 GPTP24298 496 aa16.49■□□□□ 0.23
CCDC197-201ENST00000359253 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
CCDC197-201ENST00000359253 CHMP3Q9Y3E7 222 aa16.49■□□□□ 0.23
CCDC197-201ENST00000359253 LRP5O75197 1615 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 EYA2O00167 538 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 IFIT5Q13325 482 aaKnown RBP16.48■□□□□ 0.23
CCDC197-201ENST00000359253 AACSQ86V21 672 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 NUTM1Q86Y26 1132 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 CNTROBQ8N137 903 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 PI4K2BQ8TCG2 481 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
CCDC197-201ENST00000359253 BCORQ6W2J9 1755 aa16.48■□□□□ 0.23
CCDC197-201ENST00000359253 RBM25P49756 843 aaKnown RBP16.47■□□□□ 0.23
CCDC197-201ENST00000359253 CTSWP56202 376 aa16.47■□□□□ 0.23
CCDC197-201ENST00000359253 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
CCDC197-201ENST00000359253 SIL1Q9H173 461 aa16.47■□□□□ 0.23
CCDC197-201ENST00000359253 BCL2L12Q9HB09 334 aa16.47■□□□□ 0.23
CCDC197-201ENST00000359253 NIP7Q9Y221 180 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCDC197-201ENST00000359253 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
CCDC197-201ENST00000359253 UBN2Q6ZU65 1347 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 ANKRD18BA2A2Z9 1011 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 REC8O95072 547 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 MMP10P09238 476 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
CCDC197-201ENST00000359253 TAF7LQ5H9L4 462 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 RTL5Q5HYW3 569 aaPredicted RBP16.46■□□□□ 0.23
CCDC197-201ENST00000359253 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 EAF2Q96CJ1 260 aaPredicted RBP16.46■□□□□ 0.23
CCDC197-201ENST00000359253 NYXQ9GZU5 481 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 CD2APQ9Y5K6 639 aa16.46■□□□□ 0.23
CCDC197-201ENST00000359253 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
CCDC197-201ENST00000359253 HIP1O00291 1037 aa16.44■□□□□ 0.22
CCDC197-201ENST00000359253 TFCP2Q12800 502 aa16.44■□□□□ 0.22
CCDC197-201ENST00000359253 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
CCDC197-201ENST00000359253 EVI5LQ96CN4 794 aa16.44■□□□□ 0.22
CCDC197-201ENST00000359253 CEP126Q9P2H0 1117 aa16.44■□□□□ 0.22
CCDC197-201ENST00000359253 SRCAPQ6ZRS2 3230 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 NTSR2O95665 410 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 NFIXQ14938 502 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 RILPL2Q969X0 211 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 SYT17Q9BSW7 474 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 SCN7AQ01118 1682 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 MYH3P11055 1940 aa16.43■□□□□ 0.22
CCDC197-201ENST00000359253 POLRMTO00411 1230 aaKnown RBP16.42■□□□□ 0.22
CCDC197-201ENST00000359253 ATP5JP18859 108 aa16.42■□□□□ 0.22
CCDC197-201ENST00000359253 ITGA6P23229 1130 aa16.42■□□□□ 0.22
CCDC197-201ENST00000359253 BECN1Q14457 450 aa16.42■□□□□ 0.22
CCDC197-201ENST00000359253 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
CCDC197-201ENST00000359253 SERPINB2P05120 415 aa16.41■□□□□ 0.22
CCDC197-201ENST00000359253 CHMLP26374 656 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms