RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 NRXN3Q9Y4C0 1643 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 CYP27B1O15528 508 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 LDHAL6AQ6ZMR3 332 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 RAB11FIP4Q86YS3 637 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 TRMT112Q9UI30 125 aaKnown RBP13.22□□□□□ -0.29
SSU72-202ENST00000359060 ZNF445P59923 1031 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 CUL4AQ13619 759 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 Q6ZUG5 572 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 SEC62Q99442 399 aaKnown RBP13.22□□□□□ -0.29
SSU72-202ENST00000359060 TBC1D2BQ9UPU7 963 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 DDIT3P35638 169 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 HSP90AA2PQ14568 343 aaPredicted RBP13.22□□□□□ -0.29
SSU72-202ENST00000359060 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 PAG1Q9NWQ8 432 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 ZDHHC9Q9Y397 364 aa13.22□□□□□ -0.29
SSU72-202ENST00000359060 IL15P40933 162 aaPredicted RBP13.21□□□□□ -0.29
SSU72-202ENST00000359060 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
SSU72-202ENST00000359060 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.29
SSU72-202ENST00000359060 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.29
SSU72-202ENST00000359060 ME1P48163 572 aa13.21□□□□□ -0.29
SSU72-202ENST00000359060 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
SSU72-202ENST00000359060 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.29
SSU72-202ENST00000359060 AKAP2Q9Y2D5 859 aa13.21□□□□□ -0.29
SSU72-202ENST00000359060 CEMIPQ8WUJ3 1361 aa13.21□□□□□ -0.29
SSU72-202ENST00000359060 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.3
SSU72-202ENST00000359060 ME3Q16798 604 aa13.21□□□□□ -0.3
SSU72-202ENST00000359060 RRP12Q5JTH9 1297 aaKnown RBP13.21□□□□□ -0.3
SSU72-202ENST00000359060 TRIM5Q9C035 493 aa13.21□□□□□ -0.3
SSU72-202ENST00000359060 FAM13BQ9NYF5 915 aa13.21□□□□□ -0.3
SSU72-202ENST00000359060 PCDH11XQ9BZA7 1347 aa13.21□□□□□ -0.3
SSU72-202ENST00000359060 PCDH11YQ9BZA8 1340 aa13.21□□□□□ -0.3
SSU72-202ENST00000359060 DBNLQ9UJU6 430 aaKnown RBP13.21□□□□□ -0.3
SSU72-202ENST00000359060 ADAMTS2O95450 1211 aa13.2□□□□□ -0.3
SSU72-202ENST00000359060 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
SSU72-202ENST00000359060 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
SSU72-202ENST00000359060 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSU72-202ENST00000359060 SCAND2PQ9GZW5 306 aaPredicted RBP13.2□□□□□ -0.3
SSU72-202ENST00000359060 IMMTQ16891 758 aaKnown RBP13.2□□□□□ -0.3
SSU72-202ENST00000359060 KINO60870 393 aaKnown RBP13.2□□□□□ -0.3
SSU72-202ENST00000359060 LARGE1O95461 756 aa13.2□□□□□ -0.3
SSU72-202ENST00000359060 CTNNA3Q9UI47 895 aa13.2□□□□□ -0.3
SSU72-202ENST00000359060 C3P01024 1663 aa13.19□□□□□ -0.3
SSU72-202ENST00000359060 MON2Q7Z3U7 1717 aa13.19□□□□□ -0.3
SSU72-202ENST00000359060 EPB41L2O43491 1005 aaKnown RBP13.19□□□□□ -0.3
SSU72-202ENST00000359060 MTX1Q13505 466 aa13.19□□□□□ -0.3
SSU72-202ENST00000359060 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
SSU72-202ENST00000359060 A0A1B0GUL7 405 aa13.19□□□□□ -0.3
SSU72-202ENST00000359060 RPS6KB1P23443 525 aa13.19□□□□□ -0.3
SSU72-202ENST00000359060 TRIM29Q14134 588 aa13.19□□□□□ -0.3
SSU72-202ENST00000359060 RIMS1Q86UR5 1692 aaKnown RBP13.19□□□□□ -0.3
SSU72-202ENST00000359060 AK9Q5TCS8 1911 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 NCOA3Q9Y6Q9 1424 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 STK38Q15208 465 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 ZNF589Q86UQ0 364 aaPredicted RBP13.18□□□□□ -0.3
SSU72-202ENST00000359060 CFAP45Q9UL16 551 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 ZNF830Q96NB3 372 aaPredicted RBP13.18□□□□□ -0.3
SSU72-202ENST00000359060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.3
SSU72-202ENST00000359060 ARHGAP23Q9P227 1491 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 EYA2O00167 538 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 ATP5JP18859 108 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
SSU72-202ENST00000359060 EXOC5O00471 708 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
SSU72-202ENST00000359060 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 COPRSQ9NQ92 184 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 SLAIN2Q9P270 581 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 ADCY5O95622 1261 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 ZNF396Q96N95 335 aaPredicted RBP13.17□□□□□ -0.3
SSU72-202ENST00000359060 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 SLIT1O75093 1534 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 ANKRD18BA2A2Z9 1011 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 DHX16O60231 1041 aaKnown RBP13.17□□□□□ -0.3
SSU72-202ENST00000359060 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 PTPN12Q05209 780 aaKnown RBP13.17□□□□□ -0.3
SSU72-202ENST00000359060 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 NRDCO43847 1150 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 LRRC24Q50LG9 513 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 KBTBD3Q8NAB2 608 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
SSU72-202ENST00000359060 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
SSU72-202ENST00000359060 JAK2O60674 1132 aa13.16□□□□□ -0.3
SSU72-202ENST00000359060 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
SSU72-202ENST00000359060 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
SSU72-202ENST00000359060 DACT1Q9NYF0 836 aa13.16□□□□□ -0.3
SSU72-202ENST00000359060 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
SSU72-202ENST00000359060 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
SSU72-202ENST00000359060 RBM10P98175 930 aaKnown RBP13.16□□□□□ -0.3
SSU72-202ENST00000359060 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
SSU72-202ENST00000359060 ZNF213O14771 459 aa13.16□□□□□ -0.3
SSU72-202ENST00000359060 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
SSU72-202ENST00000359060 AIDAQ96BJ3 306 aa13.15□□□□□ -0.3
SSU72-202ENST00000359060 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms