RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PCDH11XQ9BZA7 1347 aa11.14□□□□□ -0.63
SMARCAL1-202ENST00000358207 PCDH11YQ9BZA8 1340 aa11.14□□□□□ -0.63
SMARCAL1-202ENST00000358207 REC8O95072 547 aa11.13□□□□□ -0.63
SMARCAL1-202ENST00000358207 FAM182BQ5T319 152 aa11.13□□□□□ -0.63
SMARCAL1-202ENST00000358207 CTR9Q6PD62 1173 aa11.13□□□□□ -0.63
SMARCAL1-202ENST00000358207 BRMS1Q9HCU9 246 aa11.13□□□□□ -0.63
SMARCAL1-202ENST00000358207 DRC1Q96MC2 740 aa11.13□□□□□ -0.63
SMARCAL1-202ENST00000358207 NEK11Q8NG66 645 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 KIF1BPQ96EK5 621 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 SH3BP1Q9Y3L3 701 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 BCORQ6W2J9 1755 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 KIF16BQ96L93 1317 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 SCN7AQ01118 1682 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 FCHSD2O94868 740 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 NOL10Q9BSC4 688 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 DONSONQ9NYP3 566 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 ADCY5O95622 1261 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 SEMA3FQ13275 785 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 CREBRFQ8IUR6 639 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 CEP120Q8N960 986 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 SGSM3Q96HU1 749 aa11.12□□□□□ -0.63
SMARCAL1-202ENST00000358207 RLBP1P12271 317 aa11.11□□□□□ -0.63
SMARCAL1-202ENST00000358207 TNNT1P13805 278 aa11.11□□□□□ -0.63
SMARCAL1-202ENST00000358207 TSPYL6Q8N831 410 aa11.11□□□□□ -0.63
SMARCAL1-202ENST00000358207 TSPY26PQ9H489 355 aa11.11□□□□□ -0.63
SMARCAL1-202ENST00000358207 JRKLQ9Y4A0 524 aa11.11□□□□□ -0.63
SMARCAL1-202ENST00000358207 COL3A1P02461 1466 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-202ENST00000358207 CCDC189A1A4V9 331 aa11.11□□□□□ -0.63
SMARCAL1-202ENST00000358207 NBPF20Q3BBV1 942 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 MUM1L1Q5H9M0 696 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 FAM212AQ96EL1 285 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 ADCY9O60503 1353 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 PNPLA7Q6ZV29 1317 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 RAD50Q92878 1312 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 HSP90AB3PQ58FF7 597 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 TICAM2Q86XR7 235 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 ZNF428Q96B54 188 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 MCCP23508 829 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 NFE2L2Q16236 605 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 FLAD1Q8NFF5 587 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 ZDHHC9Q9Y397 364 aa11.1□□□□□ -0.63
SMARCAL1-202ENST00000358207 GOLIM4O00461 696 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 CSB-PGBD3P0DP91 1061 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 PTF1AQ7RTS3 328 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 ZCRB1Q8TBF4 217 aaKnown RBP11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 FBXO38Q6PIJ6 1188 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 ZNF397Q8NF99 534 aaPredicted RBP11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 SUFUQ9UMX1 484 aa11.09□□□□□ -0.63
SMARCAL1-202ENST00000358207 KRBA2Q6ZNG9 492 aa11.08□□□□□ -0.64
SMARCAL1-202ENST00000358207 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-202ENST00000358207 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
SMARCAL1-202ENST00000358207 ZNF827Q17R98 1081 aa11.08□□□□□ -0.64
SMARCAL1-202ENST00000358207 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
SMARCAL1-202ENST00000358207 RWDD1Q9H446 243 aaPredicted RBP11.08□□□□□ -0.64
SMARCAL1-202ENST00000358207 SMTNL1A8MU46 457 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 E2F4Q16254 413 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 RARSP54136 660 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 NUCB2P80303 420 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 MAP2K1Q02750 393 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 SMARCC1Q92922 1105 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 GTF3C6Q969F1 213 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 LRRC4BQ9NT99 713 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 NLRP2Q9NX02 1062 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 V9GYY5 206 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 TNRC6CQ9HCJ0 1690 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 ATP2B1P20020 1258 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 SSH1Q8WYL5 1049 aa11.07□□□□□ -0.64
SMARCAL1-202ENST00000358207 KAT6BQ8WYB5 2073 aa11.06□□□□□ -0.64
SMARCAL1-202ENST00000358207 AP5Z1O43299 807 aa11.06□□□□□ -0.64
SMARCAL1-202ENST00000358207 GSCP56915 257 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-202ENST00000358207 MBIPQ9NS73 344 aa11.06□□□□□ -0.64
SMARCAL1-202ENST00000358207 WDR63Q8IWG1 891 aa11.06□□□□□ -0.64
SMARCAL1-202ENST00000358207 C8orf58Q8NAV2 365 aa11.06□□□□□ -0.64
SMARCAL1-202ENST00000358207 C16orf45Q96MC5 204 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 KCPQ6ZWJ8 1503 aa11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 GOLGA6L6A8MZA4 724 aa11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 TDO2P48775 406 aa11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 ST5P78524 1137 aa11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 SRLQ86TD4 932 aa11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 CCDC191Q8NCU4 936 aa11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 UVSSAQ2YD98 709 aa11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 RTF1Q92541 710 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-202ENST00000358207 PLCD4Q9BRC7 762 aa11.04□□□□□ -0.64
SMARCAL1-202ENST00000358207 MED4Q9NPJ6 270 aa11.04□□□□□ -0.64
SMARCAL1-202ENST00000358207 MYH14Q7Z406 1995 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-202ENST00000358207 GOLGB1Q14789 3259 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-202ENST00000358207 AFDNP55196 1824 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-202ENST00000358207 MPRIPQ6WCQ1 1025 aa11.04□□□□□ -0.64
SMARCAL1-202ENST00000358207 ZGPATQ8N5A5 531 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-202ENST00000358207 EXOC6BQ9Y2D4 811 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms