RNA–Protein interactions for RNA: ENST00000357632.6

CCR9-202, Transcript of C-C motif chemokine receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR9, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-202ENST00000357632 LINC00116Q8NCU8 138 aa12.66□□□□□ -0.38
CCR9-202ENST00000357632 ANKRD18BA2A2Z9 1011 aa12.65□□□□□ -0.38
CCR9-202ENST00000357632 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCR9-202ENST00000357632 FAM89AQ96GI7 184 aa12.65□□□□□ -0.38
CCR9-202ENST00000357632 CCNL1Q9UK58 526 aaPredicted RBP12.65□□□□□ -0.38
CCR9-202ENST00000357632 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
CCR9-202ENST00000357632 RBM6P78332 1123 aaKnown RBP12.65□□□□□ -0.39
CCR9-202ENST00000357632 TAF7LQ5H9L4 462 aa12.65□□□□□ -0.39
CCR9-202ENST00000357632 SLC27A3Q5K4L6 730 aa12.65□□□□□ -0.39
CCR9-202ENST00000357632 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.39
CCR9-202ENST00000357632 TTLL11Q8NHH1 800 aa12.65□□□□□ -0.39
CCR9-202ENST00000357632 JARID2Q92833 1246 aaPredicted RBP12.65□□□□□ -0.39
CCR9-202ENST00000357632 BCL11AQ9H165 835 aa12.65□□□□□ -0.39
CCR9-202ENST00000357632 CEP126Q9P2H0 1117 aa12.65□□□□□ -0.39
CCR9-202ENST00000357632 ABCC12Q96J65 1359 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 ADRA2BP18089 450 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 GPTP24298 496 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 ANAPC15P60006 121 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 TFCP2Q12800 502 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 KRT27Q7Z3Y8 459 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 NARFQ9UHQ1 456 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 RAD50Q92878 1312 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 DDX60Q8IY21 1712 aaKnown RBP12.64□□□□□ -0.39
CCR9-202ENST00000357632 RABEP1Q15276 862 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
CCR9-202ENST00000357632 UBN2Q6ZU65 1347 aa12.64□□□□□ -0.39
CCR9-202ENST00000357632 LRP5O75197 1615 aa12.63□□□□□ -0.39
CCR9-202ENST00000357632 COL24A1Q17RW2 1714 aa12.63□□□□□ -0.39
CCR9-202ENST00000357632 KLHDC4Q8TBB5 520 aa12.63□□□□□ -0.39
CCR9-202ENST00000357632 IL17RAQ96F46 866 aa12.63□□□□□ -0.39
CCR9-202ENST00000357632 NYXQ9GZU5 481 aa12.63□□□□□ -0.39
CCR9-202ENST00000357632 ZNF609O15014 1411 aa12.63□□□□□ -0.39
CCR9-202ENST00000357632 CCDC8Q9H0W5 538 aaPredicted RBP12.63□□□□□ -0.39
CCR9-202ENST00000357632 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCR9-202ENST00000357632 HSCBQ8IWL3 235 aa12.62□□□□□ -0.39
CCR9-202ENST00000357632 CCDC152Q4G0S7 254 aa12.62□□□□□ -0.39
CCR9-202ENST00000357632 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
CCR9-202ENST00000357632 SUSD4Q5VX71 490 aa12.62□□□□□ -0.39
CCR9-202ENST00000357632 TSHZ3Q63HK5 1081 aa12.62□□□□□ -0.39
CCR9-202ENST00000357632 DIAPH3Q9NSV4 1193 aa12.62□□□□□ -0.39
CCR9-202ENST00000357632 NTSR2O95665 410 aa12.61□□□□□ -0.39
CCR9-202ENST00000357632 ITGA6P23229 1130 aa12.61□□□□□ -0.39
CCR9-202ENST00000357632 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
CCR9-202ENST00000357632 DBNLQ9UJU6 430 aaKnown RBP12.61□□□□□ -0.39
CCR9-202ENST00000357632 MROH5Q6ZUA9 1318 aa12.61□□□□□ -0.39
CCR9-202ENST00000357632 SGSM2O43147 1006 aa12.61□□□□□ -0.39
CCR9-202ENST00000357632 ZPR1O75312 459 aa12.61□□□□□ -0.39
CCR9-202ENST00000357632 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
CCR9-202ENST00000357632 SNRKQ9NRH2 765 aa12.61□□□□□ -0.39
CCR9-202ENST00000357632 SLC10A5Q5PT55 438 aa12.6□□□□□ -0.39
CCR9-202ENST00000357632 HAUS7Q99871 368 aa12.6□□□□□ -0.39
CCR9-202ENST00000357632 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
CCR9-202ENST00000357632 CCDC158Q5M9N0 1113 aa12.6□□□□□ -0.39
CCR9-202ENST00000357632 LDHAL6AQ6ZMR3 332 aa12.6□□□□□ -0.39
CCR9-202ENST00000357632 ZNF512BQ96KM6 892 aaPredicted RBP12.6□□□□□ -0.39
CCR9-202ENST00000357632 RIPOR2Q9Y4F9 1068 aa12.6□□□□□ -0.39
CCR9-202ENST00000357632 C4AP0C0L4 1744 aa12.59□□□□□ -0.39
CCR9-202ENST00000357632 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
CCR9-202ENST00000357632 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
CCR9-202ENST00000357632 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
CCR9-202ENST00000357632 GNPATO15228 680 aa12.59□□□□□ -0.39
CCR9-202ENST00000357632 SF3B3Q15393 1217 aaKnown RBP12.59□□□□□ -0.39
CCR9-202ENST00000357632 LRRC24Q50LG9 513 aa12.59□□□□□ -0.39
CCR9-202ENST00000357632 KIF2CQ99661 725 aa12.59□□□□□ -0.39
CCR9-202ENST00000357632 GREM2Q9H772 168 aa12.59□□□□□ -0.39
CCR9-202ENST00000357632 UBR3Q6ZT12 1888 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 MCM2P49736 904 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 TRAPPC3LQ5T215 181 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 CDC5LQ99459 802 aaKnown RBP12.58□□□□□ -0.4
CCR9-202ENST00000357632 DBNDD2Q9BQY9 259 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 CNNM1Q9NRU3 951 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 ST18O60284 1047 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
CCR9-202ENST00000357632 NEUROD6Q96NK8 337 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 SETDB2Q96T68 719 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 BOLA2Q9H3K6 86 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 ANO2Q9NQ90 1003 aa12.58□□□□□ -0.4
CCR9-202ENST00000357632 TLR7Q9NYK1 1049 aaKnown RBP12.58□□□□□ -0.4
CCR9-202ENST00000357632 IGHMBP2P38935 993 aaKnown RBP12.57□□□□□ -0.4
CCR9-202ENST00000357632 METTL24Q5JXM2 366 aa12.57□□□□□ -0.4
CCR9-202ENST00000357632 FSD1Q9BTV5 496 aa12.57□□□□□ -0.4
CCR9-202ENST00000357632 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.57□□□□□ -0.4
CCR9-202ENST00000357632 SSFA2P28290 1259 aa12.57□□□□□ -0.4
CCR9-202ENST00000357632 CASZ1Q86V15 1759 aa12.57□□□□□ -0.4
CCR9-202ENST00000357632 PLSCR1O15162 318 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 PDE8BO95263 885 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 RFC4P35249 363 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 PTF1AQ7RTS3 328 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 MPHOSPH8Q99549 860 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
CCR9-202ENST00000357632 MAP4K4O95819 1239 aaPredicted RBP12.56□□□□□ -0.4
CCR9-202ENST00000357632 HSPA4P34932 840 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 GORABQ5T7V8 394 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
CCR9-202ENST00000357632 KBTBD3Q8NAB2 608 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms