RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 KDRP35968 1356 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 PTGS1P23219 599 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 SULT6B1Q6IMI4 303 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 SARM1Q6SZW1 724 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 ZNF397Q8NF99 534 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-205ENST00000357568 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 GJD4Q96KN9 370 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-205ENST00000357568 EYA1Q99502 592 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-205ENST00000357568 THSD7AQ9UPZ6 1657 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 DISP2A7MBM2 1401 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 TTC41PQ6P2S7 1318 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 CCDC30Q5VVM6 783 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 NBPF6Q5VWK0 638 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 NBPF4Q96M43 638 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 SCAND2PQ9GZW5 306 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-205ENST00000357568 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 NLRP2Q9NX02 1062 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 PNMA6EA0A0J9YXQ4 647 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 KIF2AO00139 706 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-205ENST00000357568 TNNT1P13805 278 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 GJB2P29033 226 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 RBM6P78332 1123 aaKnown RBP12.61□□□□□ -0.39
CAPN3-205ENST00000357568 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
CAPN3-205ENST00000357568 HSP90AB4PQ58FF6 505 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 KIF18AQ8NI77 898 aa12.61□□□□□ -0.39
CAPN3-205ENST00000357568 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-205ENST00000357568 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-205ENST00000357568 SLFN14P0C7P3 912 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 ZNF771Q7L3S4 317 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-205ENST00000357568 G2E3Q7L622 706 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 KRT222Q8N1A0 295 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 MPNDQ8N594 471 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 FLIIQ13045 1269 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-205ENST00000357568 TSHZ3Q63HK5 1081 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 SLC4A10Q6U841 1118 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-205ENST00000357568 MCM10Q7L590 875 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 KIF1BPQ96EK5 621 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
CAPN3-205ENST00000357568 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-205ENST00000357568 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 SPC24Q8NBT2 197 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 IL25Q9H293 177 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 F6X3S4 739 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 SLC20A2Q08357 652 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
CAPN3-205ENST00000357568 CYP46A1Q9Y6A2 500 aa12.59□□□□□ -0.39
CAPN3-205ENST00000357568 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
CAPN3-205ENST00000357568 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 MRFAP1L1Q96HT8 127 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 TUBB4AP04350 444 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 IL2RBP14784 551 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 TERF2Q15554 542 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 ERO1AQ96HE7 468 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 TNMDQ9H2S6 317 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
CAPN3-205ENST00000357568 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
CAPN3-205ENST00000357568 ANKRD1Q15327 319 aa12.57□□□□□ -0.4
CAPN3-205ENST00000357568 TTC6Q86TZ1 520 aa12.57□□□□□ -0.4
CAPN3-205ENST00000357568 LRRFIP2Q9Y608 721 aaKnown RBP12.57□□□□□ -0.4
CAPN3-205ENST00000357568 UBTFL1P0CB47 393 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-205ENST00000357568 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-205ENST00000357568 CASTP20810 708 aaKnown RBP12.57□□□□□ -0.4
CAPN3-205ENST00000357568 RXRBP28702 533 aa12.57□□□□□ -0.4
CAPN3-205ENST00000357568 CEP135Q66GS9 1140 aa12.57□□□□□ -0.4
CAPN3-205ENST00000357568 NYAP1Q6ZVC0 841 aa12.57□□□□□ -0.4
CAPN3-205ENST00000357568 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
CAPN3-205ENST00000357568 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
CAPN3-205ENST00000357568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.4
CAPN3-205ENST00000357568 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 HIP1O00291 1037 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 PSMA5P28066 241 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 ANO6Q4KMQ2 910 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 POTEAQ6S8J7 498 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 TRIM5Q9C035 493 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 USP44Q9H0E7 712 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 MEGF6O75095 1541 aa12.56□□□□□ -0.4
CAPN3-205ENST00000357568 CTAGE5O15320 804 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 TPD52L1Q16890 204 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-205ENST00000357568 LUZP1Q86V48 1076 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 C16orf45Q96MC5 204 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-205ENST00000357568 SHANK3Q9BYB0 1731 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 TNS2Q63HR2 1409 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 LARGE1O95461 756 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 ST3GAL1Q11201 340 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 DRC7Q8IY82 874 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 CLIP2Q9UDT6 1046 aa12.55□□□□□ -0.4
CAPN3-205ENST00000357568 LIG1P18858 919 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms