RNA–Protein interactions for RNA: ENST00000357545.8

SPOCK3-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPOCK3, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-202ENST00000357545 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
SPOCK3-202ENST00000357545 MPNDQ8N594 471 aa17.18■□□□□ 0.34
SPOCK3-202ENST00000357545 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
SPOCK3-202ENST00000357545 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
SPOCK3-202ENST00000357545 AACSQ86V21 672 aa17.18■□□□□ 0.34
SPOCK3-202ENST00000357545 PGBD1Q96JS3 809 aa17.18■□□□□ 0.34
SPOCK3-202ENST00000357545 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
SPOCK3-202ENST00000357545 IQCB1Q15051 598 aa17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 CCDC186Q7Z3E2 898 aa17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 SMARCC2Q8TAQ2 1214 aa17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 EAF2Q96CJ1 260 aaPredicted RBP17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 A0A0D9SFI3 127 aa17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 LARP1Q6PKG0 1096 aaKnown RBP17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 CGNQ9P2M7 1197 aaKnown RBP17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 MAP3K2Q9Y2U5 619 aa17.17■□□□□ 0.34
SPOCK3-202ENST00000357545 C5P01031 1676 aa17.16■□□□□ 0.34
SPOCK3-202ENST00000357545 PLEKHG2Q9H7P9 1386 aa17.16■□□□□ 0.34
SPOCK3-202ENST00000357545 GRM8O00222 908 aa17.16■□□□□ 0.34
SPOCK3-202ENST00000357545 TAF5LO75529 589 aa17.16■□□□□ 0.34
SPOCK3-202ENST00000357545 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
SPOCK3-202ENST00000357545 SECISBP2LQ93073 1101 aaKnown RBP17.16■□□□□ 0.34
SPOCK3-202ENST00000357545 CTNNA3Q9UI47 895 aa17.16■□□□□ 0.34
SPOCK3-202ENST00000357545 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 FAM53CQ9NYF3 392 aa17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 CFAP45Q9UL16 551 aa17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 PXDNQ92626 1479 aa17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 DDX60Q8IY21 1712 aaKnown RBP17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 ZNF165P49910 485 aa17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 NYAP1Q6ZVC0 841 aa17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 SPEF2Q9C093 1822 aa17.15■□□□□ 0.34
SPOCK3-202ENST00000357545 ADD1P35611 737 aaKnown RBP17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 GABPB1Q06547 395 aaPredicted RBP17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 NBPF6Q5VWK0 638 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 NBPF4Q96M43 638 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 RCOR1Q9UKL0 485 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 SCN11AQ9UI33 1791 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 NR1I2O75469 434 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 IPO4Q8TEX9 1081 aaKnown RBP17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 SUCLG2Q96I99 432 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 KCNQ3O43525 872 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 ATP5JP18859 108 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 PLEKHO1Q53GL0 409 aaPredicted RBP17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 AGXT2Q9BYV1 514 aa17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 MORC2Q9Y6X9 1032 aaPredicted RBP17.14■□□□□ 0.33
SPOCK3-202ENST00000357545 FAM193AP78312 1265 aa17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 CBX1P83916 185 aa17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 COL9A3Q14050 684 aaPredicted RBP17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 SLFNL1Q499Z3 407 aa17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 DDX41Q9UJV9 622 aaKnown RBP17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 CACTINQ8WUQ7 758 aaKnown RBP17.13■□□□□ 0.33
SPOCK3-202ENST00000357545 TNNT1P13805 278 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 PLCB2Q00722 1185 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 CAMK4Q16566 473 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 LRRC8AQ8IWT6 810 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 RGS22Q8NE09 1264 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 CLIP2Q9UDT6 1046 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 MST1RQ04912 1400 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 KCNJ6P48051 423 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 TEFQ10587 303 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 LRMPQ12912 555 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.12■□□□□ 0.33
SPOCK3-202ENST00000357545 PFKFB2O60825 505 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 DDX58O95786 925 aaKnown RBP17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 KCNJ4P48050 445 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 STX1AQ16623 288 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 FERMT3Q86UX7 667 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 CKAP2LQ8IYA6 745 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 FBXL16Q8N461 479 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 NRBP1Q9UHY1 535 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 SALL1Q9NSC2 1324 aa17.11■□□□□ 0.33
SPOCK3-202ENST00000357545 HMGB1P09429 215 aaKnown RBP17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 DHX8Q14562 1220 aaKnown RBP17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 FAM173BQ6P4H8 233 aa17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 CCDC144CPQ8IYA2 1237 aa17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 ENGASEQ8NFI3 743 aa17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 TAF6LQ9Y6J9 622 aa17.1■□□□□ 0.33
SPOCK3-202ENST00000357545 KIF2AO00139 706 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms