RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 SLC10A5Q5PT55 438 aa20.37■□□□□ 0.85
COPS7B-202ENST00000357490 DPY19L2Q6NUT2 758 aa20.37■□□□□ 0.85
COPS7B-202ENST00000357490 ZBTB38Q8NAP3 1195 aaPredicted RBP20.37■□□□□ 0.85
COPS7B-202ENST00000357490 API5Q9BZZ5 524 aaKnown RBP20.37■□□□□ 0.85
COPS7B-202ENST00000357490 RNF123Q5XPI4 1314 aa20.36■□□□□ 0.85
COPS7B-202ENST00000357490 IPO8O15397 1037 aaKnown RBP20.36■□□□□ 0.85
COPS7B-202ENST00000357490 PCCAP05165 728 aaPredicted RBP20.36■□□□□ 0.85
COPS7B-202ENST00000357490 TRIM27P14373 513 aa20.36■□□□□ 0.85
COPS7B-202ENST00000357490 SRCIN1Q9C0H9 1055 aa20.36■□□□□ 0.85
COPS7B-202ENST00000357490 ALDH1L1O75891 902 aa20.35■□□□□ 0.85
COPS7B-202ENST00000357490 ZKSCAN2Q63HK3 967 aa20.35■□□□□ 0.85
COPS7B-202ENST00000357490 ATF7IPQ6VMQ6 1270 aa20.35■□□□□ 0.85
COPS7B-202ENST00000357490 C3orf67Q6ZVT6 689 aa20.35■□□□□ 0.85
COPS7B-202ENST00000357490 SMC1BQ8NDV3 1235 aa20.35■□□□□ 0.85
COPS7B-202ENST00000357490 H7C1W4 665 aa20.34■□□□□ 0.85
COPS7B-202ENST00000357490 ALDH1B1P30837 517 aa20.34■□□□□ 0.85
COPS7B-202ENST00000357490 IRS4O14654 1257 aaPredicted RBP20.33■□□□□ 0.85
COPS7B-202ENST00000357490 CCDC93Q567U6 631 aa20.33■□□□□ 0.85
COPS7B-202ENST00000357490 UBE3BQ7Z3V4 1068 aa20.33■□□□□ 0.85
COPS7B-202ENST00000357490 CLUAP1Q96AJ1 413 aa20.33■□□□□ 0.85
COPS7B-202ENST00000357490 RIC1Q4ADV7 1423 aa20.33■□□□□ 0.84
COPS7B-202ENST00000357490 DDX60Q8IY21 1712 aaKnown RBP20.33■□□□□ 0.84
COPS7B-202ENST00000357490 CASP7P55210 303 aa20.32■□□□□ 0.84
COPS7B-202ENST00000357490 NLRP3Q96P20 1036 aa20.32■□□□□ 0.84
COPS7B-202ENST00000357490 ABCC4O15439 1325 aa20.31■□□□□ 0.84
COPS7B-202ENST00000357490 C7orf43Q8WVR3 580 aa20.31■□□□□ 0.84
COPS7B-202ENST00000357490 SCN4AP35499 1836 aa20.31■□□□□ 0.84
COPS7B-202ENST00000357490 GRM8O00222 908 aa20.3■□□□□ 0.84
COPS7B-202ENST00000357490 PLIN1O60240 522 aa20.3■□□□□ 0.84
COPS7B-202ENST00000357490 CCT4P50991 539 aaKnown RBP20.3■□□□□ 0.84
COPS7B-202ENST00000357490 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
COPS7B-202ENST00000357490 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
COPS7B-202ENST00000357490 C9orf78Q9NZ63 289 aaPredicted RBP20.3■□□□□ 0.84
COPS7B-202ENST00000357490 LAMB2P55268 1798 aa20.3■□□□□ 0.84
COPS7B-202ENST00000357490 CDHR2Q9BYE9 1310 aa20.29■□□□□ 0.84
COPS7B-202ENST00000357490 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
COPS7B-202ENST00000357490 PDE8AO60658 829 aa20.28■□□□□ 0.84
COPS7B-202ENST00000357490 NBPF7P0C2Y1 421 aaPredicted RBP20.28■□□□□ 0.84
COPS7B-202ENST00000357490 RLBP1P12271 317 aa20.28■□□□□ 0.84
COPS7B-202ENST00000357490 FKBP4Q02790 459 aaKnown RBP eCLIP20.28■□□□□ 0.84
COPS7B-202ENST00000357490 DNAJC5GQ8N7S2 189 aa20.28■□□□□ 0.84
COPS7B-202ENST00000357490 USP44Q9H0E7 712 aa20.28■□□□□ 0.84
COPS7B-202ENST00000357490 SF3B3Q15393 1217 aaKnown RBP20.27■□□□□ 0.84
COPS7B-202ENST00000357490 DZIP1LQ8IYY4 767 aaKnown RBP20.27■□□□□ 0.84
COPS7B-202ENST00000357490 TMEM57Q8N5G2 664 aa20.27■□□□□ 0.84
COPS7B-202ENST00000357490 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
COPS7B-202ENST00000357490 UTYO14607 1347 aa20.27■□□□□ 0.83
COPS7B-202ENST00000357490 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
COPS7B-202ENST00000357490 FTSJ3Q8IY81 847 aaKnown RBP20.26■□□□□ 0.83
COPS7B-202ENST00000357490 POTECB2RU33 542 aa20.25■□□□□ 0.83
COPS7B-202ENST00000357490 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
COPS7B-202ENST00000357490 CC2D2BQ6DHV5 1058 aa20.25■□□□□ 0.83
COPS7B-202ENST00000357490 PANK1Q8TE04 598 aa20.25■□□□□ 0.83
COPS7B-202ENST00000357490 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
COPS7B-202ENST00000357490 PLA2G12BQ9BX93 195 aa20.25■□□□□ 0.83
COPS7B-202ENST00000357490 CTSWP56202 376 aa20.24■□□□□ 0.83
COPS7B-202ENST00000357490 FOXO4P98177 505 aa20.24■□□□□ 0.83
COPS7B-202ENST00000357490 GRIPAP1Q4V328 841 aa20.24■□□□□ 0.83
COPS7B-202ENST00000357490 TTLL11Q8NHH1 800 aa20.24■□□□□ 0.83
COPS7B-202ENST00000357490 RBM17Q96I25 401 aaKnown RBP20.24■□□□□ 0.83
COPS7B-202ENST00000357490 SUCLG2Q96I99 432 aa20.24■□□□□ 0.83
COPS7B-202ENST00000357490 IQCA1LA6NCM1 817 aa20.23■□□□□ 0.83
COPS7B-202ENST00000357490 DDNO94850 711 aaPredicted RBP20.23■□□□□ 0.83
COPS7B-202ENST00000357490 TAF1P21675 1872 aa20.23■□□□□ 0.83
COPS7B-202ENST00000357490 EPHA10Q5JZY3 1008 aa20.23■□□□□ 0.83
COPS7B-202ENST00000357490 KAZALD1Q96I82 304 aa20.23■□□□□ 0.83
COPS7B-202ENST00000357490 CRAMP1Q96RY5 1269 aa20.23■□□□□ 0.83
COPS7B-202ENST00000357490 ZNF277Q9NRM2 450 aaPredicted RBP20.23■□□□□ 0.83
COPS7B-202ENST00000357490 MYH3P11055 1940 aa20.23■□□□□ 0.83
COPS7B-202ENST00000357490 DDX46Q7L014 1031 aaKnown RBP20.22■□□□□ 0.83
COPS7B-202ENST00000357490 KLRG1Q96E93 195 aa20.22■□□□□ 0.83
COPS7B-202ENST00000357490 PSMD1Q99460 953 aa20.22■□□□□ 0.83
COPS7B-202ENST00000357490 MEIS3Q99687 375 aa20.22■□□□□ 0.83
COPS7B-202ENST00000357490 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
COPS7B-202ENST00000357490 CCDC152Q4G0S7 254 aa20.21■□□□□ 0.83
COPS7B-202ENST00000357490 C20orf194Q5TEA3 1177 aa20.21■□□□□ 0.83
COPS7B-202ENST00000357490 OLFM4Q6UX06 510 aa20.21■□□□□ 0.83
COPS7B-202ENST00000357490 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.21■□□□□ 0.83
COPS7B-202ENST00000357490 L3MBTL3Q96JM7 780 aaPredicted RBP20.21■□□□□ 0.83
COPS7B-202ENST00000357490 SEC31BQ9NQW1 1179 aa20.21■□□□□ 0.83
COPS7B-202ENST00000357490 PCNTO95613 3336 aa20.2■□□□□ 0.82
COPS7B-202ENST00000357490 SNED1Q8TER0 1413 aa20.2■□□□□ 0.82
COPS7B-202ENST00000357490 CSF1RP07333 972 aa20.2■□□□□ 0.82
COPS7B-202ENST00000357490 MS4A1P11836 297 aa20.2■□□□□ 0.82
COPS7B-202ENST00000357490 HTRA3P83110 453 aa20.2■□□□□ 0.82
COPS7B-202ENST00000357490 ITPRIPQ8IWB1 547 aa20.2■□□□□ 0.82
COPS7B-202ENST00000357490 GREM2Q9H772 168 aa20.2■□□□□ 0.82
COPS7B-202ENST00000357490 COL4A1P02462 1669 aa20.19■□□□□ 0.82
COPS7B-202ENST00000357490 UBTFL1P0CB47 393 aaPredicted RBP20.19■□□□□ 0.82
COPS7B-202ENST00000357490 LMBR1LQ6UX01 489 aa20.19■□□□□ 0.82
COPS7B-202ENST00000357490 SLC51AQ86UW1 340 aa20.19■□□□□ 0.82
COPS7B-202ENST00000357490 JDP2Q8WYK2 163 aa20.19■□□□□ 0.82
COPS7B-202ENST00000357490 CELF1Q92879 486 aaKnown RBP20.19■□□□□ 0.82
COPS7B-202ENST00000357490 TMX4Q9H1E5 349 aaPredicted RBP20.19■□□□□ 0.82
COPS7B-202ENST00000357490 BICC1Q9H694 974 aaKnown RBP20.19■□□□□ 0.82
COPS7B-202ENST00000357490 RRP1P56182 461 aaKnown RBP20.18■□□□□ 0.82
COPS7B-202ENST00000357490 GRAPQ13588 217 aa20.18■□□□□ 0.82
COPS7B-202ENST00000357490 FAM161AQ3B820 660 aa20.18■□□□□ 0.82
COPS7B-202ENST00000357490 CHADLQ6NUI6 762 aa20.18■□□□□ 0.82
COPS7B-202ENST00000357490 GRAPLQ8TC17 118 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms