RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 BMP2KLQ5H9B9 411 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 KIAA1524Q8TCG1 905 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 TTC14Q96N46 770 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 IMPG2Q9BZV3 1241 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 JADE2Q9NQC1 790 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 DNMBPQ6XZF7 1577 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 TOPBP1Q92547 1522 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 A0A1W2PRG0 241 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 TSPY3P0CV98 308 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 TSPY8P0CW00 308 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 CCT2P78371 535 aaKnown RBP7.38□□□□□ -1.23
UPF2-201ENST00000356352 BMS1Q14692 1282 aaKnown RBP7.38□□□□□ -1.23
UPF2-201ENST00000356352 APBB1IPQ7Z5R6 666 aaPredicted RBP7.38□□□□□ -1.23
UPF2-201ENST00000356352 ESR2Q92731 530 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 NAP1L4Q99733 375 aaKnown RBP7.38□□□□□ -1.23
UPF2-201ENST00000356352 SLC26A6Q9BXS9 759 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 RTL9Q8NET4 1388 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 CD109Q6YHK3 1445 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 DNA2P51530 1060 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 SCAF11Q99590 1463 aaKnown RBP7.38□□□□□ -1.23
UPF2-201ENST00000356352 STAT6P42226 847 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 ANKRD24Q8TF21 1146 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 ADGRL1O94910 1474 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 N4BP3O15049 544 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 CCDC82Q8N4S0 544 aa7.38□□□□□ -1.23
UPF2-201ENST00000356352 AKR1B10O60218 316 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 GNAT2P19087 354 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 CKAP2LQ8IYA6 745 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 NGLY1Q96IV0 654 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 PRIMPOLQ96LW4 560 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 SPAG5Q96R06 1193 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 PHACTR2O75167 634 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 MYCNP04198 464 aaPredicted RBP7.37□□□□□ -1.23
UPF2-201ENST00000356352 SYKP43405 635 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 IFIT1BQ5T764 474 aaKnown RBP7.37□□□□□ -1.23
UPF2-201ENST00000356352 IQGAP2Q13576 1575 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 RALGAPBQ86X10 1494 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 TTC22Q5TAA0 569 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 RRAGBQ5VZM2 374 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 ZNF804AQ7Z570 1209 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 NME9Q86XW9 330 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 DHX37Q8IY37 1157 aaKnown RBP7.37□□□□□ -1.23
UPF2-201ENST00000356352 ZBTB43O43298 467 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 OPA1O60313 960 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 CEP135Q66GS9 1140 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 MICU3Q86XE3 530 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 NYXQ9GZU5 481 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 HMGXB3Q12766 1538 aa7.37□□□□□ -1.23
UPF2-201ENST00000356352 BICDL2A1A5D9 508 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 PSMA7O14818 248 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 PLCG2P16885 1265 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 ZNF165P49910 485 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 ARHGAP45Q92619 1136 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 TNPO1Q92973 898 aaKnown RBP7.36□□□□□ -1.23
UPF2-201ENST00000356352 ZBTB3Q9H5J0 574 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 VAT1LQ9HCJ6 419 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 USP25Q9UHP3 1055 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 AMOTL2Q9Y2J4 779 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 CUL7Q14999 1698 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 PRXQ9BXM0 1461 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 HSPA4P34932 840 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 KRT83P78385 493 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 RTN1Q16799 776 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 CCDC14Q49A88 953 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 NBPF6Q5VWK0 638 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 KRT28Q7Z3Y7 464 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 NBPF5PQ86XG9 351 aaPredicted RBP7.36□□□□□ -1.23
UPF2-201ENST00000356352 USHBP1Q8N6Y0 703 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 FBF1Q8TES7 1133 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 NBPF4Q96M43 638 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 SRRTQ9BXP5 876 aaKnown RBP7.36□□□□□ -1.23
UPF2-201ENST00000356352 C6orf50Q9HD87 102 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 SYNJ1O43426 1573 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 CTAGE15A4D2H0 777 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 TACC1O75410 805 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 SLU7O95391 586 aaKnown RBP7.36□□□□□ -1.23
UPF2-201ENST00000356352 ADCY5O95622 1261 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 CTAGE8P0CG41 777 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 GPTP24298 496 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 CALML3P27482 149 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 SSFA2P28290 1259 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 CTAGE6Q86UF2 777 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 CTAGE4Q8IX94 777 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 WAPLQ7Z5K2 1190 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 ZNF622Q969S3 477 aaKnown RBP eCLIP7.36□□□□□ -1.232e-7■■□□□ 13.9
UPF2-201ENST00000356352 PKNOX2Q96KN3 472 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 PTPN23Q9H3S7 1636 aa7.36□□□□□ -1.23
UPF2-201ENST00000356352 F6X3S4 739 aa7.35□□□□□ -1.23
UPF2-201ENST00000356352 ALDH1L1O75891 902 aa7.35□□□□□ -1.23
UPF2-201ENST00000356352 ATP2A2P16615 1042 aaKnown RBP7.35□□□□□ -1.23
UPF2-201ENST00000356352 TICAM2Q86XR7 235 aa7.35□□□□□ -1.23
UPF2-201ENST00000356352 SMARCC2Q8TAQ2 1214 aa7.35□□□□□ -1.23
UPF2-201ENST00000356352 C16orf45Q96MC5 204 aaPredicted RBP7.35□□□□□ -1.23
UPF2-201ENST00000356352 THUMPD2Q9BTF0 503 aaKnown RBP7.35□□□□□ -1.23
UPF2-201ENST00000356352 TRMT1Q9NXH9 659 aaKnown RBP7.35□□□□□ -1.23
UPF2-201ENST00000356352 ANAPC4Q9UJX5 808 aa7.35□□□□□ -1.23
UPF2-201ENST00000356352 NDC80O14777 642 aa7.35□□□□□ -1.23
UPF2-201ENST00000356352 ADAMTS2O95450 1211 aa7.35□□□□□ -1.23
UPF2-201ENST00000356352 IVLP07476 585 aa7.35□□□□□ -1.23
UPF2-201ENST00000356352 ZSCAN22P10073 491 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms