RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 SRCAPQ6ZRS2 3230 aa19.5■□□□□ 0.71
TRIM13-201ENST00000356017 CSF1RP07333 972 aa19.5■□□□□ 0.71
TRIM13-201ENST00000356017 FOXO4P98177 505 aa19.5■□□□□ 0.71
TRIM13-201ENST00000356017 DDX46Q7L014 1031 aaKnown RBP19.5■□□□□ 0.71
TRIM13-201ENST00000356017 CNKSR1Q969H4 720 aa19.5■□□□□ 0.71
TRIM13-201ENST00000356017 ZNF622Q969S3 477 aaKnown RBP eCLIP19.5■□□□□ 0.71
TRIM13-201ENST00000356017 SUCLG2Q96I99 432 aa19.5■□□□□ 0.71
TRIM13-201ENST00000356017 ANKRD31Q8N7Z5 1873 aa19.5■□□□□ 0.71
TRIM13-201ENST00000356017 GNAI2P04899 355 aa19.49■□□□□ 0.71
TRIM13-201ENST00000356017 KCNA3P22001 575 aa19.49■□□□□ 0.71
TRIM13-201ENST00000356017 CRAMP1Q96RY5 1269 aa19.49■□□□□ 0.71
TRIM13-201ENST00000356017 KAZALD1Q96I82 304 aa19.48■□□□□ 0.71
TRIM13-201ENST00000356017 DDX60Q8IY21 1712 aaKnown RBP19.48■□□□□ 0.71
TRIM13-201ENST00000356017 LAMB2P55268 1798 aa19.48■□□□□ 0.71
TRIM13-201ENST00000356017 TNRC6CQ9HCJ0 1690 aaKnown RBP19.48■□□□□ 0.71
TRIM13-201ENST00000356017 RABL6Q3YEC7 729 aaPredicted RBP19.47■□□□□ 0.71
TRIM13-201ENST00000356017 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
TRIM13-201ENST00000356017 TTLL6Q8N841 843 aa19.47■□□□□ 0.71
TRIM13-201ENST00000356017 BICC1Q9H694 974 aaKnown RBP19.47■□□□□ 0.71
TRIM13-201ENST00000356017 LRRFIP2Q9Y608 721 aaKnown RBP19.47■□□□□ 0.71
TRIM13-201ENST00000356017 RTL9Q8NET4 1388 aa19.47■□□□□ 0.71
TRIM13-201ENST00000356017 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
TRIM13-201ENST00000356017 DALRD3Q5D0E6 543 aaKnown RBP19.46■□□□□ 0.71
TRIM13-201ENST00000356017 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
TRIM13-201ENST00000356017 BBOX1O75936 387 aa19.45■□□□□ 0.7
TRIM13-201ENST00000356017 IFIT5Q13325 482 aaKnown RBP19.45■□□□□ 0.7
TRIM13-201ENST00000356017 CCDC57Q2TAC2 916 aa19.45■□□□□ 0.7
TRIM13-201ENST00000356017 CCDC85AQ96PX6 553 aaPredicted RBP19.45■□□□□ 0.7
TRIM13-201ENST00000356017 CDC5LQ99459 802 aaKnown RBP19.45■□□□□ 0.7
TRIM13-201ENST00000356017 GREM2Q9H772 168 aa19.45■□□□□ 0.7
TRIM13-201ENST00000356017 GRAPQ13588 217 aa19.44■□□□□ 0.7
TRIM13-201ENST00000356017 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
TRIM13-201ENST00000356017 GRAPLQ8TC17 118 aaPredicted RBP19.44■□□□□ 0.7
TRIM13-201ENST00000356017 ZBTB40Q9NUA8 1239 aa19.44■□□□□ 0.7
TRIM13-201ENST00000356017 ANKRD18BA2A2Z9 1011 aa19.43■□□□□ 0.7
TRIM13-201ENST00000356017 ITGA6P23229 1130 aa19.43■□□□□ 0.7
TRIM13-201ENST00000356017 FAM161AQ3B820 660 aa19.43■□□□□ 0.7
TRIM13-201ENST00000356017 KIAA1551Q9HCM1 1747 aa19.43■□□□□ 0.7
TRIM13-201ENST00000356017 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
TRIM13-201ENST00000356017 PRPF40BQ6NWY9 871 aaKnown RBP19.43■□□□□ 0.7
TRIM13-201ENST00000356017 TMC4Q7Z404 712 aa19.43■□□□□ 0.7
TRIM13-201ENST00000356017 SEC31BQ9NQW1 1179 aa19.43■□□□□ 0.7
TRIM13-201ENST00000356017 COL11A2P13942 1736 aaPredicted RBP19.42■□□□□ 0.7
TRIM13-201ENST00000356017 MTX1Q13505 466 aa19.42■□□□□ 0.7
TRIM13-201ENST00000356017 AAMPQ13685 434 aa19.42■□□□□ 0.7
TRIM13-201ENST00000356017 ANKRD18AQ8IVF6 992 aa19.42■□□□□ 0.7
TRIM13-201ENST00000356017 TMX4Q9H1E5 349 aaPredicted RBP19.42■□□□□ 0.7
TRIM13-201ENST00000356017 BCS1LQ9Y276 419 aa19.42■□□□□ 0.7
TRIM13-201ENST00000356017 CELF1Q92879 486 aaKnown RBP19.41■□□□□ 0.7
TRIM13-201ENST00000356017 CRBNQ96SW2 442 aa19.41■□□□□ 0.7
TRIM13-201ENST00000356017 DLEC1Q9Y238 1755 aa19.41■□□□□ 0.7
TRIM13-201ENST00000356017 MYH3P11055 1940 aa19.41■□□□□ 0.7
TRIM13-201ENST00000356017 IGHMBP2P38935 993 aaKnown RBP19.4■□□□□ 0.7
TRIM13-201ENST00000356017 TAF7LQ5H9L4 462 aa19.4■□□□□ 0.7
TRIM13-201ENST00000356017 SOGA3Q5TF21 947 aa19.4■□□□□ 0.7
TRIM13-201ENST00000356017 PPEF1O14829 653 aaPredicted RBP19.4■□□□□ 0.7
TRIM13-201ENST00000356017 CC2D2BQ6DHV5 1058 aa19.4■□□□□ 0.7
TRIM13-201ENST00000356017 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
TRIM13-201ENST00000356017 SRGAP3O43295 1099 aa19.39■□□□□ 0.69
TRIM13-201ENST00000356017 RPAP2Q8IXW5 612 aaPredicted RBP19.39■□□□□ 0.69
TRIM13-201ENST00000356017 MPHOSPH8Q99549 860 aa19.39■□□□□ 0.69
TRIM13-201ENST00000356017 C1orf115Q9H7X2 142 aa19.39■□□□□ 0.69
TRIM13-201ENST00000356017 ATP8B2P98198 1209 aa19.38■□□□□ 0.69
TRIM13-201ENST00000356017 GRIPAP1Q4V328 841 aa19.38■□□□□ 0.69
TRIM13-201ENST00000356017 SP8Q8IXZ3 490 aa19.38■□□□□ 0.69
TRIM13-201ENST00000356017 PELP1Q8IZL8 1130 aaKnown RBP19.38■□□□□ 0.69
TRIM13-201ENST00000356017 BSDC1Q9NW68 430 aaPredicted RBP19.38■□□□□ 0.69
TRIM13-201ENST00000356017 ATP6V0A2Q9Y487 856 aa19.38■□□□□ 0.69
TRIM13-201ENST00000356017 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
TRIM13-201ENST00000356017 GPR162Q16538 588 aa19.37■□□□□ 0.69
TRIM13-201ENST00000356017 C7orf43Q8WVR3 580 aa19.37■□□□□ 0.69
TRIM13-201ENST00000356017 C21orf2O43822 256 aa19.36■□□□□ 0.69
TRIM13-201ENST00000356017 LDHAL6AQ6ZMR3 332 aa19.36■□□□□ 0.69
TRIM13-201ENST00000356017 BRCA1P38398 1863 aaKnown RBP19.36■□□□□ 0.69
TRIM13-201ENST00000356017 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
TRIM13-201ENST00000356017 GRIN3BO60391 1043 aa19.35■□□□□ 0.69
TRIM13-201ENST00000356017 RFX5P48382 616 aaPredicted RBP19.35■□□□□ 0.69
TRIM13-201ENST00000356017 CCDC93Q567U6 631 aa19.35■□□□□ 0.69
TRIM13-201ENST00000356017 RTKN2Q8IZC4 609 aa19.35■□□□□ 0.69
TRIM13-201ENST00000356017 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
TRIM13-201ENST00000356017 FBXO3Q9UK99 471 aa19.35■□□□□ 0.69
TRIM13-201ENST00000356017 PNMA6EA0A0J9YXQ4 647 aa19.34■□□□□ 0.69
TRIM13-201ENST00000356017 HMMRO75330 724 aa19.34■□□□□ 0.69
TRIM13-201ENST00000356017 YBX3P16989 372 aaKnown RBP eCLIP19.34■□□□□ 0.69
TRIM13-201ENST00000356017 PTPN12Q05209 780 aaKnown RBP19.34■□□□□ 0.69
TRIM13-201ENST00000356017 SSH3Q8TE77 659 aa19.34■□□□□ 0.69
TRIM13-201ENST00000356017 ZNF594Q96JF6 807 aaPredicted RBP19.34■□□□□ 0.69
TRIM13-201ENST00000356017 COPRSQ9NQ92 184 aa19.34■□□□□ 0.69
TRIM13-201ENST00000356017 CNNM1Q9NRU3 951 aa19.34■□□□□ 0.69
TRIM13-201ENST00000356017 SLX4Q8IY92 1834 aa19.33■□□□□ 0.69
TRIM13-201ENST00000356017 POLA2Q14181 598 aa19.33■□□□□ 0.69
TRIM13-201ENST00000356017 EXOC6Q8TAG9 804 aa19.33■□□□□ 0.69
TRIM13-201ENST00000356017 IRX6P78412 446 aaPredicted RBP19.33■□□□□ 0.68
TRIM13-201ENST00000356017 MINPP1Q9UNW1 487 aa19.33■□□□□ 0.68
TRIM13-201ENST00000356017 NEFLP07196 543 aa19.32■□□□□ 0.68
TRIM13-201ENST00000356017 KLHDC4Q8TBB5 520 aa19.32■□□□□ 0.68
TRIM13-201ENST00000356017 ANKRD2Q9GZV1 360 aa19.32■□□□□ 0.68
TRIM13-201ENST00000356017 CIAO1O76071 339 aa19.31■□□□□ 0.68
TRIM13-201ENST00000356017 MPNDQ8N594 471 aa19.31■□□□□ 0.68
TRIM13-201ENST00000356017 ANKIB1Q9P2G1 1089 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms