RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 EIF4A1P60842 406 aaKnown RBP17.84■□□□□ 0.45
STRN3-201ENST00000355683 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
STRN3-201ENST00000355683 NOLC1Q14978 699 aaKnown RBP eCLIP17.83■□□□□ 0.45
STRN3-201ENST00000355683 LDHAL6AQ6ZMR3 332 aa17.83■□□□□ 0.45
STRN3-201ENST00000355683 CCDC112Q8NEF3 446 aa17.83■□□□□ 0.45
STRN3-201ENST00000355683 ZKSCAN3Q9BRR0 538 aa17.83■□□□□ 0.45
STRN3-201ENST00000355683 RNMTO43148 476 aaKnown RBP17.83■□□□□ 0.44
STRN3-201ENST00000355683 LIG1P18858 919 aa17.83■□□□□ 0.44
STRN3-201ENST00000355683 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
STRN3-201ENST00000355683 MAP3K5Q99683 1374 aa17.82■□□□□ 0.44
STRN3-201ENST00000355683 CLSTN1O94985 981 aa17.82■□□□□ 0.44
STRN3-201ENST00000355683 LRMPQ12912 555 aa17.82■□□□□ 0.44
STRN3-201ENST00000355683 SPECC1Q5M775 1068 aa17.82■□□□□ 0.44
STRN3-201ENST00000355683 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
STRN3-201ENST00000355683 ADGRB3O60242 1522 aa17.82■□□□□ 0.44
STRN3-201ENST00000355683 CCAR1Q8IX12 1150 aaKnown RBP17.82■□□□□ 0.44
STRN3-201ENST00000355683 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
STRN3-201ENST00000355683 MYL10Q9BUA6 226 aa17.82■□□□□ 0.44
STRN3-201ENST00000355683 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
STRN3-201ENST00000355683 EDC4Q6P2E9 1401 aaKnown RBP17.82■□□□□ 0.44
STRN3-201ENST00000355683 A0A1B0GVL5 298 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 DHX8Q14562 1220 aaKnown RBP17.81■□□□□ 0.44
STRN3-201ENST00000355683 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 TTC21AQ8NDW8 1320 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 HIP1O00291 1037 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 PCMTD1Q96MG8 357 aaPredicted RBP17.81■□□□□ 0.44
STRN3-201ENST00000355683 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 TRMT112Q9UI30 125 aaKnown RBP17.81■□□□□ 0.44
STRN3-201ENST00000355683 TPM3P06753 285 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 TDO2P48775 406 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 KIF6Q6ZMV9 814 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 TPCN1Q9ULQ1 816 aa17.81■□□□□ 0.44
STRN3-201ENST00000355683 ZFYVE9O95405 1425 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 TNNT1P13805 278 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 MTERF4Q7Z6M4 381 aaKnown RBP17.8■□□□□ 0.44
STRN3-201ENST00000355683 GPIHBP1Q8IV16 184 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 ZFP91Q96JP5 570 aaPredicted RBP17.8■□□□□ 0.44
STRN3-201ENST00000355683 C8orf76Q96K31 380 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 MADDQ8WXG6 1647 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 CCDC171Q6TFL3 1326 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 hCG_1642624A0A1W2PR95 340 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 ANKRD1Q15327 319 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 CFAP100Q494V2 611 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 AKAP4Q5JQC9 854 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 PPP4R3BQ5MIZ7 849 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 ZNF589Q86UQ0 364 aaPredicted RBP17.8■□□□□ 0.44
STRN3-201ENST00000355683 GOLGA6L1Q8N7Z2 621 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 GJB4Q9NTQ9 266 aa17.8■□□□□ 0.44
STRN3-201ENST00000355683 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
STRN3-201ENST00000355683 KLF18A0A0U1RQI7 1052 aa17.79■□□□□ 0.44
STRN3-201ENST00000355683 BRD1O95696 1058 aa17.79■□□□□ 0.44
STRN3-201ENST00000355683 LMOD1P29536 600 aaPredicted RBP17.79■□□□□ 0.44
STRN3-201ENST00000355683 AMOTQ4VCS5 1084 aa17.79■□□□□ 0.44
STRN3-201ENST00000355683 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
STRN3-201ENST00000355683 SLC27A2O14975 620 aa17.79■□□□□ 0.44
STRN3-201ENST00000355683 ZNF790Q6PG37 636 aa17.79■□□□□ 0.44
STRN3-201ENST00000355683 PI16Q6UXB8 463 aa17.79■□□□□ 0.44
STRN3-201ENST00000355683 PIK3C2BO00750 1634 aa17.79■□□□□ 0.44
STRN3-201ENST00000355683 ERICH2A1L162 156 aa17.78■□□□□ 0.44
STRN3-201ENST00000355683 PLEKHG3A1L390 1219 aa17.78■□□□□ 0.44
STRN3-201ENST00000355683 TYRO3Q06418 890 aa17.78■□□□□ 0.44
STRN3-201ENST00000355683 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
STRN3-201ENST00000355683 IFNL2Q8IZJ0 200 aa17.78■□□□□ 0.44
STRN3-201ENST00000355683 RAI14Q9P0K7 980 aa17.78■□□□□ 0.44
STRN3-201ENST00000355683 SNAP23O00161 211 aa17.78■□□□□ 0.44
STRN3-201ENST00000355683 CMTR1Q8N1G2 835 aaKnown RBP17.78■□□□□ 0.44
STRN3-201ENST00000355683 IP6K1Q92551 441 aa17.78■□□□□ 0.44
STRN3-201ENST00000355683 AIDAQ96BJ3 306 aa17.78■□□□□ 0.44
STRN3-201ENST00000355683 TTLL7Q6ZT98 887 aa17.77■□□□□ 0.44
STRN3-201ENST00000355683 MIGA1Q8NAN2 632 aa17.77■□□□□ 0.44
STRN3-201ENST00000355683 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
STRN3-201ENST00000355683 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.44
STRN3-201ENST00000355683 SH2B1Q9NRF2 756 aaPredicted RBP17.77■□□□□ 0.44
STRN3-201ENST00000355683 NRBP1Q9UHY1 535 aa17.77■□□□□ 0.44
STRN3-201ENST00000355683 MARCH6O60337 910 aa17.77■□□□□ 0.43
STRN3-201ENST00000355683 HSPA4P34932 840 aa17.77■□□□□ 0.43
STRN3-201ENST00000355683 SCAND2PQ9GZW5 306 aaPredicted RBP17.77■□□□□ 0.43
STRN3-201ENST00000355683 ALKQ9UM73 1620 aa17.77■□□□□ 0.43
STRN3-201ENST00000355683 SAFBQ15424 915 aaKnown RBP eCLIP17.76■□□□□ 0.43
STRN3-201ENST00000355683 BEND3Q5T5X7 828 aa17.76■□□□□ 0.43
STRN3-201ENST00000355683 AOPEPQ8N6M6 819 aa17.76■□□□□ 0.43
STRN3-201ENST00000355683 CFAP45Q9UL16 551 aa17.76■□□□□ 0.43
STRN3-201ENST00000355683 TAF6LQ9Y6J9 622 aa17.76■□□□□ 0.43
STRN3-201ENST00000355683 MROH1Q8NDA8 1641 aa17.76■□□□□ 0.43
STRN3-201ENST00000355683 CGNQ9P2M7 1197 aaKnown RBP17.76■□□□□ 0.43
STRN3-201ENST00000355683 IMMTQ16891 758 aaKnown RBP17.76■□□□□ 0.43
STRN3-201ENST00000355683 TMC6Q7Z403 805 aa17.76■□□□□ 0.43
STRN3-201ENST00000355683 ZNF213O14771 459 aa17.75■□□□□ 0.43
STRN3-201ENST00000355683 LETM1O95202 739 aaPredicted RBP17.75■□□□□ 0.43
STRN3-201ENST00000355683 NOC3LQ8WTT2 800 aaKnown RBP17.75■□□□□ 0.43
STRN3-201ENST00000355683 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
STRN3-201ENST00000355683 RAD50Q92878 1312 aa17.75■□□□□ 0.43
STRN3-201ENST00000355683 GIGYF1O75420 1035 aaPredicted RBP17.75■□□□□ 0.43
STRN3-201ENST00000355683 C8orf37Q96NL8 207 aa17.75■□□□□ 0.43
STRN3-201ENST00000355683 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
STRN3-201ENST00000355683 PREX1Q8TCU6 1659 aa17.75■□□□□ 0.43
STRN3-201ENST00000355683 TTC6Q86TZ1 520 aa17.75■□□□□ 0.43
STRN3-201ENST00000355683 SSH3Q8TE77 659 aa17.75■□□□□ 0.43
STRN3-201ENST00000355683 ZNF396Q96N95 335 aaPredicted RBP17.75■□□□□ 0.43
STRN3-201ENST00000355683 OFD1O75665 1012 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms