RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 BECN1Q14457 450 aa27.87■■■□□ 2.05
SCAMP3-202ENST00000355379 SYNE4Q8N205 404 aa27.87■■■□□ 2.05
SCAMP3-202ENST00000355379 C4BP0C0L5 1744 aa27.86■■■□□ 2.05
SCAMP3-202ENST00000355379 SH3TC1Q8TE82 1336 aa27.86■■■□□ 2.05
SCAMP3-202ENST00000355379 HSP90B1P14625 803 aaKnown RBP27.86■■■□□ 2.05
SCAMP3-202ENST00000355379 RBM6P78332 1123 aaKnown RBP27.86■■■□□ 2.05
SCAMP3-202ENST00000355379 ESYT1Q9BSJ8 1104 aa27.86■■■□□ 2.05
SCAMP3-202ENST00000355379 USP26Q9BXU7 913 aa27.86■■■□□ 2.05
SCAMP3-202ENST00000355379 DAXXQ9UER7 740 aaPredicted RBP27.86■■■□□ 2.05
SCAMP3-202ENST00000355379 KCNQ4P56696 695 aa27.85■■■□□ 2.05
SCAMP3-202ENST00000355379 ZNF594Q96JF6 807 aaPredicted RBP27.85■■■□□ 2.05
SCAMP3-202ENST00000355379 ERICH6Q7L0X2 663 aa27.84■■■□□ 2.05
SCAMP3-202ENST00000355379 TLR7Q9NYK1 1049 aaKnown RBP27.84■■■□□ 2.05
SCAMP3-202ENST00000355379 NIP7Q9Y221 180 aaKnown RBP eCLIP27.84■■■□□ 2.05
SCAMP3-202ENST00000355379 LRRC24Q50LG9 513 aa27.83■■■□□ 2.05
SCAMP3-202ENST00000355379 EVI5LQ96CN4 794 aa27.83■■■□□ 2.05
SCAMP3-202ENST00000355379 NARFQ9UHQ1 456 aa27.83■■■□□ 2.05
SCAMP3-202ENST00000355379 EPB41L2O43491 1005 aaKnown RBP27.82■■■□□ 2.04
SCAMP3-202ENST00000355379 NTSR2O95665 410 aa27.82■■■□□ 2.04
SCAMP3-202ENST00000355379 DBNLQ9UJU6 430 aaKnown RBP27.82■■■□□ 2.04
SCAMP3-202ENST00000355379 ANKRD18BA2A2Z9 1011 aa27.82■■■□□ 2.04
SCAMP3-202ENST00000355379 ATP5JP18859 108 aa27.82■■■□□ 2.04
SCAMP3-202ENST00000355379 TAF7LQ5H9L4 462 aa27.82■■■□□ 2.04
SCAMP3-202ENST00000355379 MAP4K4O95819 1239 aaPredicted RBP27.81■■■□□ 2.04
SCAMP3-202ENST00000355379 GREM2Q9H772 168 aa27.81■■■□□ 2.04
SCAMP3-202ENST00000355379 RTCBQ9Y3I0 505 aaKnown RBP27.81■■■□□ 2.04
SCAMP3-202ENST00000355379 ZNF609O15014 1411 aa27.81■■■□□ 2.04
SCAMP3-202ENST00000355379 ITGA6P23229 1130 aa27.8■■■□□ 2.04
SCAMP3-202ENST00000355379 PUS3Q9BZE2 481 aaKnown RBP27.8■■■□□ 2.04
SCAMP3-202ENST00000355379 CEP126Q9P2H0 1117 aa27.8■■■□□ 2.04
SCAMP3-202ENST00000355379 COL24A1Q17RW2 1714 aa27.8■■■□□ 2.04
SCAMP3-202ENST00000355379 LRP5O75197 1615 aa27.79■■■□□ 2.04
SCAMP3-202ENST00000355379 GNPATO15228 680 aa27.79■■■□□ 2.04
SCAMP3-202ENST00000355379 KIF2CQ99661 725 aa27.79■■■□□ 2.04
SCAMP3-202ENST00000355379 C4AP0C0L4 1744 aa27.79■■■□□ 2.04
SCAMP3-202ENST00000355379 RTL9Q8NET4 1388 aa27.79■■■□□ 2.04
SCAMP3-202ENST00000355379 DBNDD2Q9BQY9 259 aa27.77■■■□□ 2.04
SCAMP3-202ENST00000355379 AKAP2Q9Y2D5 859 aa27.77■■■□□ 2.04
SCAMP3-202ENST00000355379 HMGB2P26583 209 aaKnown RBP27.77■■■□□ 2.04
SCAMP3-202ENST00000355379 SLC27A3Q5K4L6 730 aa27.77■■■□□ 2.04
SCAMP3-202ENST00000355379 CCDC85AQ96PX6 553 aaPredicted RBP27.77■■■□□ 2.04
SCAMP3-202ENST00000355379 BCL2L12Q9HB09 334 aa27.77■■■□□ 2.04
SCAMP3-202ENST00000355379 RIPOR2Q9Y4F9 1068 aa27.77■■■□□ 2.04
SCAMP3-202ENST00000355379 HIP1O00291 1037 aa27.76■■■□□ 2.03
SCAMP3-202ENST00000355379 BOLA2Q9H3K6 86 aa27.76■■■□□ 2.03
SCAMP3-202ENST00000355379 RUFY2Q8WXA3 655 aa27.75■■■□□ 2.03
SCAMP3-202ENST00000355379 SNX21Q969T3 373 aa27.75■■■□□ 2.03
SCAMP3-202ENST00000355379 CASZ1Q86V15 1759 aa27.75■■■□□ 2.03
SCAMP3-202ENST00000355379 UBR3Q6ZT12 1888 aa27.74■■■□□ 2.03
SCAMP3-202ENST00000355379 ZPR1O75312 459 aa27.74■■■□□ 2.03
SCAMP3-202ENST00000355379 HCLS1P14317 486 aaPredicted RBP27.74■■■□□ 2.03
SCAMP3-202ENST00000355379 LDHAL6AQ6ZMR3 332 aa27.74■■■□□ 2.03
SCAMP3-202ENST00000355379 TBC1D2Q9BYX2 928 aa27.74■■■□□ 2.03
SCAMP3-202ENST00000355379 RIC1Q4ADV7 1423 aa27.74■■■□□ 2.03
SCAMP3-202ENST00000355379 SGSM2O43147 1006 aa27.73■■■□□ 2.03
SCAMP3-202ENST00000355379 SLC4A3P48751 1232 aa27.73■■■□□ 2.03
SCAMP3-202ENST00000355379 USPL1Q5W0Q7 1092 aa27.73■■■□□ 2.03
SCAMP3-202ENST00000355379 LRRC4BQ9NT99 713 aa27.73■■■□□ 2.03
SCAMP3-202ENST00000355379 SPEF2Q9C093 1822 aa27.73■■■□□ 2.03
SCAMP3-202ENST00000355379 A0A1B0GUL7 405 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 FAM177BA6PVY3 158 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 ADRA2BP18089 450 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 CCDC152Q4G0S7 254 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 ARHGEF1Q92888 912 aaKnown RBP27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 NEUROD6Q96NK8 337 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 HAUS7Q99871 368 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 DIAPH3Q9NSV4 1193 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 RFX7Q2KHR2 1363 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 TIMM10P62072 90 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 TBC1D9BQ66K14 1250 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 TICAM2Q86XR7 235 aa27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.72■■■□□ 2.03
SCAMP3-202ENST00000355379 TRIM37O94972 964 aa27.71■■■□□ 2.03
SCAMP3-202ENST00000355379 SLC10A5Q5PT55 438 aa27.71■■■□□ 2.03
SCAMP3-202ENST00000355379 TRAPPC3LQ5T215 181 aa27.71■■■□□ 2.03
SCAMP3-202ENST00000355379 NYXQ9GZU5 481 aa27.71■■■□□ 2.03
SCAMP3-202ENST00000355379 CNNM1Q9NRU3 951 aa27.71■■■□□ 2.03
SCAMP3-202ENST00000355379 MCCP23508 829 aa27.7■■■□□ 2.02
SCAMP3-202ENST00000355379 RABEP1Q15276 862 aa27.7■■■□□ 2.02
SCAMP3-202ENST00000355379 SRP68Q9UHB9 627 aaKnown RBP27.7■■■□□ 2.02
SCAMP3-202ENST00000355379 METTL24Q5JXM2 366 aa27.69■■■□□ 2.02
SCAMP3-202ENST00000355379 ANO2Q9NQ90 1003 aa27.69■■■□□ 2.02
SCAMP3-202ENST00000355379 MROH5Q6ZUA9 1318 aa27.68■■■□□ 2.02
SCAMP3-202ENST00000355379 SMIM5Q71RC9 77 aa27.68■■■□□ 2.02
SCAMP3-202ENST00000355379 SETDB2Q96T68 719 aa27.68■■■□□ 2.02
SCAMP3-202ENST00000355379 ARAP2Q8WZ64 1704 aa27.68■■■□□ 2.02
SCAMP3-202ENST00000355379 ABCC12Q96J65 1359 aa27.68■■■□□ 2.02
SCAMP3-202ENST00000355379 RXRBP28702 533 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 RFC4P35249 363 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 SF3B3Q15393 1217 aaKnown RBP27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 ERFEQ4G0M1 354 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 AMIGO3Q86WK7 504 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 HSCBQ8IWL3 235 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 VGLL2Q8N8G2 317 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 IL17RAQ96F46 866 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 RAD50Q92878 1312 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 ANAPC15P60006 121 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 CWC27Q6UX04 472 aaKnown RBP27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 FSD1Q9BTV5 496 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 IL25Q9H293 177 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms