RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RIC1Q4ADV7 1423 aa20.97■□□□□ 0.95
VPS13B-201ENST00000355155 DBNLQ9UJU6 430 aaKnown RBP20.97■□□□□ 0.95
VPS13B-201ENST00000355155 RAD50Q92878 1312 aa20.97■□□□□ 0.95
VPS13B-201ENST00000355155 A0A1B0GUL6 1792 aa20.97■□□□□ 0.95
VPS13B-201ENST00000355155 TRIM6-TRIM34B2RNG4 842 aa20.97■□□□□ 0.95
VPS13B-201ENST00000355155 HSP90B1P14625 803 aaKnown RBP20.96■□□□□ 0.95
VPS13B-201ENST00000355155 SIL1Q9H173 461 aa20.96■□□□□ 0.95
VPS13B-201ENST00000355155 RILPL2Q969X0 211 aa20.96■□□□□ 0.95
VPS13B-201ENST00000355155 FAM89AQ96GI7 184 aa20.96■□□□□ 0.95
VPS13B-201ENST00000355155 RPS6KA4O75676 772 aa20.96■□□□□ 0.95
VPS13B-201ENST00000355155 BCL11BQ9C0K0 894 aaPredicted RBP20.96■□□□□ 0.95
VPS13B-201ENST00000355155 ANTXR1Q9H6X2 564 aa20.96■□□□□ 0.95
VPS13B-201ENST00000355155 TLR7Q9NYK1 1049 aaKnown RBP20.96■□□□□ 0.95
VPS13B-201ENST00000355155 TBC1D2BQ9UPU7 963 aa20.96■□□□□ 0.95
VPS13B-201ENST00000355155 ZNF652Q9Y2D9 606 aa20.96■□□□□ 0.95
VPS13B-201ENST00000355155 CCDC57Q2TAC2 916 aa20.95■□□□□ 0.94
VPS13B-201ENST00000355155 DAXXQ9UER7 740 aaPredicted RBP20.95■□□□□ 0.94
VPS13B-201ENST00000355155 IRS4O14654 1257 aaPredicted RBP20.95■□□□□ 0.94
VPS13B-201ENST00000355155 NTSR2O95665 410 aa20.95■□□□□ 0.94
VPS13B-201ENST00000355155 SEPT12Q8IYM1 358 aa20.95■□□□□ 0.94
VPS13B-201ENST00000355155 KCNB2Q92953 911 aa20.94■□□□□ 0.94
VPS13B-201ENST00000355155 HAUS7Q99871 368 aa20.94■□□□□ 0.94
VPS13B-201ENST00000355155 CCDC8Q9H0W5 538 aaPredicted RBP20.94■□□□□ 0.94
VPS13B-201ENST00000355155 UBR3Q6ZT12 1888 aa20.94■□□□□ 0.94
VPS13B-201ENST00000355155 RIPOR2Q9Y4F9 1068 aa20.94■□□□□ 0.94
VPS13B-201ENST00000355155 RGPD3A6NKT7 1758 aaPredicted RBP20.93■□□□□ 0.94
VPS13B-201ENST00000355155 RGPD4Q7Z3J3 1758 aa20.93■□□□□ 0.94
VPS13B-201ENST00000355155 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
VPS13B-201ENST00000355155 UTP14AQ9BVJ6 771 aaKnown RBP20.93■□□□□ 0.94
VPS13B-201ENST00000355155 SUSD4Q5VX71 490 aa20.93■□□□□ 0.94
VPS13B-201ENST00000355155 RUFY2Q8WXA3 655 aa20.93■□□□□ 0.94
VPS13B-201ENST00000355155 ZNF330Q9Y3S2 320 aaPredicted RBP20.93■□□□□ 0.94
VPS13B-201ENST00000355155 IFIT5Q13325 482 aaKnown RBP20.92■□□□□ 0.94
VPS13B-201ENST00000355155 TRMT112Q9UI30 125 aaKnown RBP20.92■□□□□ 0.94
VPS13B-201ENST00000355155 AKAP2Q9Y2D5 859 aa20.92■□□□□ 0.94
VPS13B-201ENST00000355155 DDIT3P35638 169 aa20.92■□□□□ 0.94
VPS13B-201ENST00000355155 ZNF512BQ96KM6 892 aaPredicted RBP20.92■□□□□ 0.94
VPS13B-201ENST00000355155 LSG1Q9H089 658 aaKnown RBP20.92■□□□□ 0.94
VPS13B-201ENST00000355155 LRRC24Q50LG9 513 aa20.91■□□□□ 0.94
VPS13B-201ENST00000355155 PTF1AQ7RTS3 328 aa20.91■□□□□ 0.94
VPS13B-201ENST00000355155 GPTP24298 496 aa20.91■□□□□ 0.94
VPS13B-201ENST00000355155 HSCBQ8IWL3 235 aa20.91■□□□□ 0.94
VPS13B-201ENST00000355155 VGLL2Q8N8G2 317 aa20.91■□□□□ 0.94
VPS13B-201ENST00000355155 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
VPS13B-201ENST00000355155 NARFQ9UHQ1 456 aa20.91■□□□□ 0.94
VPS13B-201ENST00000355155 MED23Q9ULK4 1368 aa20.91■□□□□ 0.94
VPS13B-201ENST00000355155 HMGB2P26583 209 aaKnown RBP20.91■□□□□ 0.94
VPS13B-201ENST00000355155 HSPA4P34932 840 aa20.91■□□□□ 0.94
VPS13B-201ENST00000355155 SLC10A5Q5PT55 438 aa20.9■□□□□ 0.94
VPS13B-201ENST00000355155 ANKRD18BA2A2Z9 1011 aa20.9■□□□□ 0.94
VPS13B-201ENST00000355155 MCCP23508 829 aa20.9■□□□□ 0.94
VPS13B-201ENST00000355155 DBNDD2Q9BQY9 259 aa20.89■□□□□ 0.94
VPS13B-201ENST00000355155 IL25Q9H293 177 aa20.89■□□□□ 0.94
VPS13B-201ENST00000355155 ITGA6P23229 1130 aa20.89■□□□□ 0.93
VPS13B-201ENST00000355155 SLC4A3P48751 1232 aa20.89■□□□□ 0.93
VPS13B-201ENST00000355155 GREM2Q9H772 168 aa20.89■□□□□ 0.93
VPS13B-201ENST00000355155 ZNF594Q96JF6 807 aaPredicted RBP20.88■□□□□ 0.93
VPS13B-201ENST00000355155 PUS3Q9BZE2 481 aaKnown RBP20.88■□□□□ 0.93
VPS13B-201ENST00000355155 BCL2L12Q9HB09 334 aa20.88■□□□□ 0.93
VPS13B-201ENST00000355155 CEP126Q9P2H0 1117 aa20.88■□□□□ 0.93
VPS13B-201ENST00000355155 CHMP3Q9Y3E7 222 aa20.88■□□□□ 0.93
VPS13B-201ENST00000355155 FAM196AQ6ZSG2 479 aa20.88■□□□□ 0.93
VPS13B-201ENST00000355155 AKAP11Q9UKA4 1901 aa20.87■□□□□ 0.93
VPS13B-201ENST00000355155 SYNE4Q8N205 404 aa20.87■□□□□ 0.93
VPS13B-201ENST00000355155 ADRA2BP18089 450 aa20.86■□□□□ 0.93
VPS13B-201ENST00000355155 RTL5Q5HYW3 569 aaPredicted RBP20.86■□□□□ 0.93
VPS13B-201ENST00000355155 CCNL1Q9UK58 526 aaPredicted RBP20.86■□□□□ 0.93
VPS13B-201ENST00000355155 K7ELQ4 463 aaPredicted RBP20.86■□□□□ 0.93
VPS13B-201ENST00000355155 ZBTB22O15209 634 aa20.86■□□□□ 0.93
VPS13B-201ENST00000355155 SF3B3Q15393 1217 aaKnown RBP20.86■□□□□ 0.93
VPS13B-201ENST00000355155 SLC27A3Q5K4L6 730 aa20.86■□□□□ 0.93
VPS13B-201ENST00000355155 MROH5Q6ZUA9 1318 aa20.86■□□□□ 0.93
VPS13B-201ENST00000355155 A0A1B0GUL7 405 aa20.86■□□□□ 0.93
VPS13B-201ENST00000355155 MAP4K4O95819 1239 aaPredicted RBP20.86■□□□□ 0.93
VPS13B-201ENST00000355155 DIAPH3Q9NSV4 1193 aa20.86■□□□□ 0.93
VPS13B-201ENST00000355155 MYH7P12883 1935 aa20.85■□□□□ 0.93
VPS13B-201ENST00000355155 BOLA2Q9H3K6 86 aa20.85■□□□□ 0.93
VPS13B-201ENST00000355155 NIP7Q9Y221 180 aaKnown RBP eCLIP20.85■□□□□ 0.93
VPS13B-201ENST00000355155 DOCK2Q92608 1830 aa20.85■□□□□ 0.93
VPS13B-201ENST00000355155 ZNF772Q68DY9 489 aaPredicted RBP20.84■□□□□ 0.93
VPS13B-201ENST00000355155 CIZ1Q9ULV3 898 aaPredicted RBP20.84■□□□□ 0.93
VPS13B-201ENST00000355155 FGFR2P21802 821 aa20.84■□□□□ 0.93
VPS13B-201ENST00000355155 MCM2P49736 904 aa20.84■□□□□ 0.93
VPS13B-201ENST00000355155 KBTBD3Q8NAB2 608 aa20.84■□□□□ 0.93
VPS13B-201ENST00000355155 ANO2Q9NQ90 1003 aa20.83■□□□□ 0.93
VPS13B-201ENST00000355155 A0A0G2JS52 829 aa20.83■□□□□ 0.92
VPS13B-201ENST00000355155 CD2BP2O95400 341 aaKnown RBP20.83■□□□□ 0.92
VPS13B-201ENST00000355155 MYT1Q01538 1121 aa20.83■□□□□ 0.92
VPS13B-201ENST00000355155 CCDC152Q4G0S7 254 aa20.83■□□□□ 0.92
VPS13B-201ENST00000355155 BCL11AQ9H165 835 aa20.83■□□□□ 0.92
VPS13B-201ENST00000355155 KRT27Q7Z3Y8 459 aa20.82■□□□□ 0.92
VPS13B-201ENST00000355155 MAP4K1Q92918 833 aa20.82■□□□□ 0.92
VPS13B-201ENST00000355155 NYXQ9GZU5 481 aa20.82■□□□□ 0.92
VPS13B-201ENST00000355155 ARXQ96QS3 562 aa20.82■□□□□ 0.92
VPS13B-201ENST00000355155 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
VPS13B-201ENST00000355155 CCDC171Q6TFL3 1326 aa20.81■□□□□ 0.92
VPS13B-201ENST00000355155 PDE8BO95263 885 aa20.81■□□□□ 0.92
VPS13B-201ENST00000355155 RBM6P78332 1123 aaKnown RBP20.81■□□□□ 0.92
VPS13B-201ENST00000355155 NMIQ13287 307 aaPredicted RBP20.81■□□□□ 0.92
VPS13B-201ENST00000355155 LDHAL6AQ6ZMR3 332 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms