RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 TRIM7Q9C029 511 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 PFDN4Q9NQP4 134 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 GJC1P36383 396 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 HAND2P61296 217 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 EVI5LQ96CN4 794 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 EPSTI1Q96J88 318 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 FAM13AO94988 1023 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 LARP6Q9BRS8 491 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 SLC52A1Q9NWF4 448 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 ARID5AQ03989 594 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 RNF216Q9NWF9 866 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 WTAPQ15007 396 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 STX8Q9UNK0 236 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 CTAGE1Q96RT6 745 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 GTPBP4Q9BZE4 634 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 CUX1P39880 1505 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 PPP1R9BQ96SB3 815 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 ATP2B3Q16720 1220 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 CRNKL1Q9BZJ0 848 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 TTC14Q96N46 770 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 FAM169AQ9Y6X4 670 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 RFC4P35249 363 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 GSTO1P78417 241 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 TSPY3P0CV98 308 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 TSPY8P0CW00 308 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 AFAP1Q8N556 730 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 ADCY5O95622 1261 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 USHBP1Q8N6Y0 703 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 ATRIPQ8WXE1 791 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 TCHPQ9BT92 498 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 ARFGAP3Q9NP61 516 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 HDAC9Q9UKV0 1011 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 JAKMIP2Q96AA8 810 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 SELENOSQ9BQE4 189 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 STIM2Q9P246 746 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 CWC25Q9NXE8 425 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 B4DLN1 442 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 MRPL12P52815 198 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC50Q8IVM0 306 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 NCOA7Q8NI08 942 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 NBPF1Q3BBV0 1214 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 CFAP157Q5JU67 520 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 HEATR3Q7Z4Q2 680 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 NGLY1Q96IV0 654 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 TRAF1Q13077 416 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 PPP1R42Q7Z4L9 355 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 ZGPATQ8N5A5 531 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 ATAD2Q6PL18 1390 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 GDPD2Q9HCC8 539 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 AFMP43652 599 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 FEZ2Q9UHY8 353 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 CLEC11AQ9Y240 323 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 TACC1O75410 805 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 RAB11FIP4Q86YS3 637 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 KIF5AQ12840 1032 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC61Q9Y6R9 512 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 PTGS1P23219 599 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 ZNF165P49910 485 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 MSANTD4Q8NCY6 345 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 PAXBP1Q9Y5B6 917 aa6.57□□□□□ -1.36
SRGAP1-201ENST00000355086 CALM1P0DP23 149 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CALM2P0DP24 149 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CALM3P0DP25 149 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 UBE2HP62256 183 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 SIRT1Q96EB6 747 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 MCM5P33992 734 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC25Q86WR0 208 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 RTN1Q16799 776 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 AKNAQ7Z591 1439 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 OGFOD1Q8N543 542 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 LMBR1Q8WVP7 490 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC114Q96M63 670 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 C6orf50Q9HD87 102 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CTAGE9A4FU28 777 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 BMP15O95972 392 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 ATP2A2P16615 1042 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 ASIC1P78348 528 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CTAGE15A4D2H0 777 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CTAGE8P0CG41 777 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CTAGE6Q86UF2 777 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CTAGE4Q8IX94 777 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 LDHAL6AQ6ZMR3 332 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 SEC62Q99442 399 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 GTF2A1P52655 376 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 OPA1O60313 960 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 PPFIA3O75145 1194 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 THUMPD2Q9BTF0 503 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CAVIN2O95810 425 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 NUDT16Q96DE0 195 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 HMG20BQ9P0W2 317 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC171Q6TFL3 1326 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 PSMA7O14818 248 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 EXOC5O00471 708 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 ALDH3A1P30838 453 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 KCNK9Q9NPC2 374 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC121Q6ZUS5 278 aa6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 ZSCAN16Q9H4T2 348 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-201ENST00000355086 NSD3Q9BZ95 1437 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 KIF3CO14782 793 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms